Gene:
Gene Symbol:
Pcdhgb5
Gene Name:
protocadherin gamma subfamily B, 5
Original Clone ID:
FLH481519.01X
Keyword:
None
Species:
Mus musculus
Type:
cDNA
Vector Name:
pENTR223.1
Format:
CLOSED
Source:
The ORFeome Collaboration
Description:
None
Comments:
None
Mutation / Discrepancy:
No / No
Publications:
None
Authors:
The ORFeome Collaboration
MmCD00295264
Price:
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AVAILABLE
No restriction
Special MTA: None
Special MTA: None
Insert sequence: 2781nts
Open reading frame: 35 to 2815
GTACAAAAAAGCAGAAGGGCCGTCAAGGCCCACCATGTGGGAGGGCACTGCTGAGAGGGG
CCGGGGACAGAGGCGGCCAATGCTCCTTCCCTTCCTGCTGCCTTTGTTCTGCCCCGCGCT
CTCTGAGCAGATCCGCTACAAGATCCCCGAGGAAATGCCCACCGGCTCGGTAGTGGGGAA
CCTCGCCAAGGACCTGGGCTTCAGTGTCCAGGAGTTACCGACTCGAAAGCTACGCATCAG
TTCTGAGAAGCCTTACTTCAGTGTGAGCTCAGAGAGCGGAGAGTTGCTAGTAAGCAGCAG
GCTGGACAGGGAGCAGATATGCGGGAAGAAGCTGGTGTGTGCTCTGGAATTTGAGGCTGT
TGCTGAAAATCCACTGAACTTTTATCATGTGAGTGTGGAGCTGGAGGACATTAATGACCA
CACGCCAAACTTCACGCACACTTTCTCGGAACTGCAAATAAGTGAGTCTGCTCAACCGGG
CACTCGCTTCATTTTAGAAGTAGCAGAAGATGCAGATATTGCCTTAAATTCGCTACAGAA
TTATAAACTCTCTCCTAGCCCTGGTTTCTCCCTGGTGAATAAAGAAAAACAAGATGGTCG
TAAGTACCCGGAATTGGTATTGGAGAAAACTTTAGACCGCGAGCAACAGAATTACTACCG
ACTAGTCCTGACAGCCTTAGACGGCGGGGATCCTCCCCTAAGTGGCACCACTGAGCTGCG
AATCCAAGTCACTGATGCCAACGACAACCCCCCTGTGTTCAACCAGGAAGTGTACAAAGT
CCGCCTTCCTGAGAACGTGCCCCCAGGTACAACCGTGCTACGAGTGACAGCTACAGATAA
AGATGAGGGCGTGAATTCAGAGATTTCTTATTCCTTTCACAGAGCTGGGCAAGTGTTTGG
TCTAAATTCAAAGAGTGGAGAAATTATAACACAGAAAACACTAGATTTCGAAGAAATCAA
AGAATATTCTATAGTAGTGGAAGCGCGGGATGGCGGAGGCCTGGTTGCACAATGTACAGT
TGAAATTAACATTCAAGATGAAAACGACAACAGACCAGAAATTACTGTCCGTTCTCTGCT
AGAGATGATTCCAGAGAACGCACCGCCGGGAACACTAATTGCTTTGATCAAAATACACGA
CGGAGATTCTGGAGAAAACGGGGAGGTTAATTGTCGACTAGACGATGAAGTGCCCTTTAA
AATTATCTCTTCTTCCAAAAACTCGTATAAATTGGTTACGGATAGAGCCTTAGACCGAGA
GCTGACTCCAGAATACAATGTGACCATTACGGCCACTGACAGAGGCAAGCCACCCCTTTC
CTCCAGCACAAAAGTCACCCTACACGTTGGTGACGTCAATGACAACGCTCCGCTTTTTCA
CCAGGCCTCCTACTTGGTGTACATAGCTGAGAACAACCCACCTGGAGCTTCCATCGCTCA
AGTCAGCGCCTCCGACCCGGATCTGGGATCCAATGGTCATGTCTCCTACTCCATCATAGC
TAGTGACCTGGAGCCTAAATCGCTGTGGTCCTACGTGACCGTGAATGCGCAGAGCGGAGT
GGTGTTCGCGCAGCGCGCCTTCGACCACGAGCAGCTGCGCTCCTTCCAGCTGACACTGCA
GGCGCGGGACCACGGATCGCCCACACTCAGCGCCAACGTGAGCATGCGCGTGCTGGTGGG
CGACCGCAACGACAACGCGCCACGCGTTTTGTATCCCGCGCTCGAGCCCGACGGCTCTGC
GCTCTTCGACATGGTGCCGCGCGCTGCCCAGCCCGGATACCTGGTAACCAAAGTGGTGGC
GGTGGACGCAGACTCGGGACACAATGCCTGGCTGTCCTACCACGTGCTGCAGGCCAGCGA
TCCCGGGCTCTTCAGCCTGGGACTGCGCACGGGCGAGGTGCGCACAGCGCGTGCCTTGGG
CGAAAAGGATGCTGCGCGGCAGCGCCTGTTGGTTGGTGTTCGCGATGGTGGACAGCCACC
CCTCTCGGCCACCGCCACGCTGCTTCTAGTATTCGCTGATAGCTTGCAGGAGGCCCTGCC
AGACCTCAGTGACCACTCACTGCCCCCTGATCCTCAAGCCGAGCTGCAGTTCTACTTGGT
GGTGGCCTTGGCCTTAGTTTCTGTGCTTTTCCTCCTGGCTGTGATTCTAGCCATCGCACT
TCGACTGCGACACTCCTCCAGCCCCTCGGTCTGGAATTGCTTTCAGCCTGGATTTTGTTC
TGAATCTAAGCCTGTGGTTTTCCCCAACTATAGTGAAGGTACTTTGCCGTATTCCTATAA
TCTGTATGGTGCACATGCTGGAAAGACCGAGTGTAATTTCCTAAAATGTAGTGAGCCATT
AAGTTCTGGACAAGGCCTTCTTTGCCCTGAGTCATCTGGGGCCTTGTTTCCTCTTTGTGA
TTCCAGTGAGCCGACTTCCCACCCCGAACCTCTAACACCGCAAGCCCCGCCCAACACTGA
CTGGCGTTTCTCTCAAGCCCAGAGACCCGGCACGAGCGGATCCCAAAATGGTGATGAAAC
TGGCACCTGGCCCAACAACCAGTTTGATACAGAGATGCTGCAAGCCATGATCTTGGCCTC
TGCCAGCGAAGCTGCTGATGGGAGCTCTACCCTGGGAGGGGGCGCTGGCACCATGGGTCT
GAGCGCTCGATACGGACCCCAGTTTACCCTGCAGCACGTGCCTGACTACCGCCAGAACGT
GTACATCCCTGGCAGCAATGCCACGCTGACCAATGCCGCTGGCAAACGAGATGGCAAGGC
TCCAGCAGGTGGTAATGGCAACAAGAAGAAATCGGGCAAGAAAGAGAAGAAGTAGGGCCT
CATGGGCCCAGCTTTCTTGTAC
Protein sequence predicted based on nucleotide sequence
MWEGTAERGRGQRRPMLLPFLLPLFCPALSEQIRYKIPEEMPTGSVVGNLAKDLGFSVQE LPTRKLRISSEKPYFSVSSESGELLVSSRLDREQICGKKLVCALEFEAVAENPLNFYHVS VELEDINDHTPNFTHTFSELQISESAQPGTRFILEVAEDADIALNSLQNYKLSPSPGFSL VNKEKQDGRKYPELVLEKTLDREQQNYYRLVLTALDGGDPPLSGTTELRIQVTDANDNPP VFNQEVYKVRLPENVPPGTTVLRVTATDKDEGVNSEISYSFHRAGQVFGLNSKSGEIITQ KTLDFEEIKEYSIVVEARDGGGLVAQCTVEINIQDENDNRPEITVRSLLEMIPENAPPGT LIALIKIHDGDSGENGEVNCRLDDEVPFKIISSSKNSYKLVTDRALDRELTPEYNVTITA TDRGKPPLSSSTKVTLHVGDVNDNAPLFHQASYLVYIAENNPPGASIAQVSASDPDLGSN GHVSYSIIASDLEPKSLWSYVTVNAQSGVVFAQRAFDHEQLRSFQLTLQARDHGSPTLSA NVSMRVLVGDRNDNAPRVLYPALEPDGSALFDMVPRAAQPGYLVTKVVAVDADSGHNAWL SYHVLQASDPGLFSLGLRTGEVRTARALGEKDAARQRLLVGVRDGGQPPLSATATLLLVF ADSLQEALPDLSDHSLPPDPQAELQFYLVVALALVSVLFLLAVILAIALRLRHSSSPSVW NCFQPGFCSESKPVVFPNYSEGTLPYSYNLYGAHAGKTECNFLKCSEPLSSGQGLLCPES SGALFPLCDSSEPTSHPEPLTPQAPPNTDWRFSQAQRPGTSGSQNGDETGTWPNNQFDTE MLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTN AAGKRDGKAPAGGNGNKKKSGKKEKK*
Coding Sequence Details
Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Reference Sequence Annotations:
Start on reference sequence
1
End on reference sequence
2781
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None
Recommended Growth Condition:
Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:
bacterial
Marker:
spectinomycin
Bacterial Selection Condition:
100 ug/mL spectinomycin
Growth Condition:
Growth at 37 degrees C in LB supplemented with 100 ug/mL spectinomycin.
Comments:
None
Protein Expression Results:
None
Recommended expression in:
Not Applicable
Vector Name:
pENTR223.1
Synonyms:
pDONR-223.1, pENTR223-star-Sfi
Description:
Gateway type (lambda att-type) recombinational cloning entry (master) vector; spectinomycin resistance; recombinational cloning.
Comments:
Additional information about this vector is available from the commercial website and at the ORFeome website http://orfeomecollaboration.org/vectors.php
Size (bp):
4311
Parent Vector:
None
Properties:
Gateway, donor (entry), recombinational cloning
Author Name:
Invitrogen
Publications:
None
Vector Map:
Vector Sequence:
Sequence:
Vector Features:
Type
Name
Description
Start
End
MCS
MCS
MCS (Sfi sites flank the cassette present only in no insert form)
1265
1277
bacterial origin
ori
bacterial origin of replication
1
534
negative selection marker
ccdB
ccdB (no insert form only; lost in with insert form)
1312
1617
primer site
M13 F
M13 forward primer for insert sequencing
1113
1129
primer site
T7
T7 Forward primer for insert sequencing
2902
2921
primer site
M13 reverse
M13 reverse primer for insert sequencing
2926
2942
recombination site
attL1
attL1 recombination site
1165
1264
recombination site
attL2
attL2 recombination site
2786
2885
selectable marker
CmR
chlR (no insert form only; lost in with insert form)
1959
2618
selectable marker
SpnR
spectinomycin resistance gene
3154
4164
