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NFIB (Homo sapiens) in pLenti6.2/V5-DEST (V5-tagged lentiviral mammalian expression vector)

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Explanation of Terms


Gene: Gene Symbol:  NFIB
Gene Name:  nuclear factor I/B
Sequence             
Original Clone ID: FLH269139.01L
Keyword: None
Species: Homo sapiens
Type: cDNA
Vector Name: pLenti6.2/V5-DEST               Format:  FUSION
Source: HIP
Description: None
Comments: None
Mutation/
Discrepancy :
No / No
Publications: None
Authors:
HsCD00329404

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AVAILABLE
No restriction
Special MTA: None

 

Insert sequence: 1263nts         Open reading frame : 1 to 1263
Reference Sequence Alignment

ATGATGTATTCTCCCATCTGTCTCACTCAGGATGAATTTCACCCATTCATCGAGGCACTT
CTTCCACATGTCCGTGCAATTGCCTATACTTGGTTCAACCTGCAGGCTCGAAAACGCAAG
TACTTTAAAAAGCATGAGAAGCGAATGTCAAAGGATGAAGAAAGAGCAGTCAAAGATGAG
CTTCTCAGTGAAAAGCCTGAAATCAAACAGAAGTGGGCATCCAGGCTCCTTGCCAAACTG
CGCAAAGATATTCGCCAGGAGTATCGAGAGGACTTTGTGCTCACCGTGACTGGCAAGAAG
CACCCGTGCTGTGTCTTATCCAATCCCGACCAGAAGGGTAAGATTAGGAGAATCGACTGC
CTGCGACAGGCAGACAAAGTCTGGCGTCTGGATCTAGTCATGGTGATCCTGTTCAAAGGC
ATCCCCTTGGAAAGTACCGATGGAGAGCGGCTCATGAAATCCCCACATTGCACAAACCCA
GCACTTTGTGTCCAGCCACATCATATCACAGTATCAGTTAAGGAGCTTGATTTGTTTTTG
GCATACTACGTGCAGGAGCAAGATTCTGGACAATCAGGAAGTCCAAGCCACAATGATCCT
GCCAAGAATCCTCCAGGTTACCTTGAGGATAGTTTTGTAAAATCTGGAGTCTTCAATGTA
TCAGAACTTGTAAGAGTATCCAGAACGCCCATAACCCAGGGAACTGGAGTCAACTTCCCA
ATTGGAGAAATCCCAAGCCAACCATACTATCATGACATGAACTCGGGGGTCAATCTTCAG
AGGTCTCTGTCTTCTCCACCAAGCAGCAAAAGACCCAAAACTATATCCATAGATGAAAAT
ATGGAACCAAGTCCTACAGGAGACTTTTACCCCTCTCCAAGTTCACCAGCTGCTGGAAGT
CGAACATGGCACGAAAGAGATCAAGATATGTCTTCTCCGACTACTATGAAGAAGCCTGAA
AAGCCATTGTTCAGCTCTGCATCTCCACAGGATTCTTCCCCAAGACTGAGCACTTTCCCC
CAGCACCACCATCCCGGAATACCTGGAGTTGCACACAGTGTCATCTCAACTCGAACTCCA
CCTCCACCTTCACCGTTGCCATTTCCAACACAAGCTATCCTTCCTCCAGCCCCATCGAGC
TACTTTTCTCATCCAACAATCAGATATCCTCCCCACCTGAATCCTCAGGATACTCTGAAG
AACTATGTACCTTCTTATGACCCATCCAGTCCACAAACCAGCCAGTCCTGGTACCTGGGC
TTG


Coding Sequence Details
Insert Sequence Verified?: N Verification Method: Insert was fully sequenced in parent vector
Reference Sequence Annotations:
End on reference sequence 1421
Start on reference sequence 159
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
5p GTACAAAAAAGCAGGCTCCACC(atg-goi)

3' Linker Sequence:
5p (goi-stop)GACCCAGCTTTCTTGTAC

 

 Recommended Growth Condition:

Distributed in bacterial strain : DH5-alpha T1 phage resistant
Antibiotic Selection: Host Type:  bacterial    Marker:  ampicillin
Host Type:  mammalian    Marker:  blasticidin
Bacterial Selection Condition:  100 ug/mL ampicillin
Growth Condition:  Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:  Commonly used conditions for ampicillin resistant plasmid clones.
Protein Expression Results: None
Recommended expression in: Not Applicable
       DyNA Vector Map

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Vector Name: pLenti6.2/V5-DEST

pLenti6.2V5-DEST in advanced viewed

Synonyms: pLenti6.2/V5-DEST
Sequencing Primer: Forward:  CMV forward
Reverse:  V5 reverse
Description: Lentiviral mammalian expression vector;CMV promoter and C-terminal V5 tag; ampicillin resistance in bacteria; blasticidin resistance in mammalian cells; Gateway recombinational cloning.
Comments: None
Size (bp): 8813
Parent Vector: None
Empty Vector: None
Properties: Gateway, acceptor (destination), lentiviral infection, mammalian expression, recombinational cloning, with tag/fusion/marker
Author Name: Invitrogen
Publications: None
Vector Map:         Vector Sequence:
Sequence:

 



Vector Features:

Type Name Description Start Position End Position
bacterial origin pUC ori pUC origin of replication 7733 8406
death cassette ccdB ccdB death cassette (removed when insert is present) 3767 3976
packaging signal HIV-1 psi HIV-1 psi packaging signal 521 565
poly-A signal SV40 SV40 polyadenylation signal 5639 5770
promoter RSV RSV/5' LTR hybrid promoter 1 410
promoter CMV CMV promoter driving gene of interest 1809 2392
promoter PGK PGK promoter to drive selection marker in mammalian cells 4266 4771
recombination site attR2 attR2 recombinational cloning site 4127 4142
recombination site attR1 attR1 recombinational cloning site 2440 2456
response element HIV-1 RRE HIV-1 Rev response element (RRE) 1075 1308
selectable marker AmpR Ampicillin resistance gene for selection in bacteria 6728 7588
selectable marker BlastR Blasticidin resistance gene in mammalian cells 4849 5249
selectable marker CmR chloramphenicol resistance marker (removed in plasmids with insert) 2673 3329
splice acceptor site 3' splice acceptor two 3' splice acceptors at 1656 and 1684 1656 1656
splice donor site 5' splice donor 5' splice donor 520 520
tag V5 C-terminal V5 epitope tag 4197 4238

 

  • Gene
  • Pathways
  • Protein
  • Clone
  • Organism
  • Genome
  • Reagents

Gene

 

Gene Symbol : NFIB
Symbol Nomenclature : NFIB
SYNONYM : CTF; HMGIC/NFIB; NF-I/B; NF1-B; NFI-B; NFI-RED; NFIB2; NFIB3
Designation : CCAAT-box-binding transcription factor|TGGCA-binding protein|nuclear factor 1 B-type|nuclear factor 1/B
Full Nomenclature : nuclear factor I/B
GENEID : 4781
Locus Tag : RP11-280O24.2
HGNC : 7785
MIM : 600728
Vega : OTTHUMG00000021027
Target GenBank: BC001283

 

Reference Sequence Alignment

  

HsCD00329404        ------------------------------------------------------------
NM_001190737.1      ------------------------------------------------------------
XM_005251470.1      ------------------------------------------------------------
NM_001190738.1      ATGGAAAGAATCCCAGTGTCTGTGGACTTCTGGGTTGTCTGCTGTGCAGTTCTGAAATGT
XM_005251467.1      ------------------------------------------------------------
NM_005596.3         ------------------------------------------------------------
XM_005251469.1      ------------------------------------------------------------
                                                                                

HsCD00329404        ------------------ATGATGTATTCTCCCATCTGTCTCACTCAGGATGAATTTCAC
NM_001190737.1      ------------------ATGATGTATTCTCCCATCTGTCTCACTCAGGATGAATTTCAC
XM_005251470.1      ------------------ATGATGTATTCTCCCATCTGTCTCACTCAGGATGAATTTCAC
NM_001190738.1      AACCCTGGGATTCCTAAAAGAATGTCAACTCTGTGCTTTGGATTTTCTGATGAATTTCAC
XM_005251467.1      ------------------ATGATGTATTCTCCCATCTGTCTCACTCAGGATGAATTTCAC
NM_005596.3         ------------------ATGATGTATTCTCCCATCTGTCTCACTCAGGATGAATTTCAC
XM_005251469.1      ------------------ATGATGTATTCTCCCATCTGTCTCACTCAGGATGAATTTCAC
                                      * .****.::***  : ** *  .: * . ************

HsCD00329404        CCATTCATCGAGGCACTTCTTCCACATGTCCGTGCAATTGCCTATACTTGGTTCAACCTG
NM_001190737.1      CCATTCATCGAGGCACTTCTTCCACATGTCCGTGCAATTGCCTATACTTGGTTCAACCTG
XM_005251470.1      CCATTCATCGAGGCACTTCTTCCACATGTCCGTGCAATTGCCTATACTTGGTTCAACCTG
NM_001190738.1      CCATTCATCGAGGCACTTCTTCCACATGTCCGTGCAATTGCCTATACTTGGTTCAACCTG
XM_005251467.1      CCATTCATCGAGGCACTTCTTCCACATGTCCGTGCAATTGCCTATACTTGGTTCAACCTG
NM_005596.3         CCATTCATCGAGGCACTTCTTCCACATGTCCGTGCAATTGCCTATACTTGGTTCAACCTG
XM_005251469.1      CCATTCATCGAGGCACTTCTTCCACATGTCCGTGCAATTGCCTATACTTGGTTCAACCTG
                    ************************************************************

HsCD00329404        CAGGCTCGAAAACGCAAGTACTTTAAAAAGCATGAGAAGCGAATGTCAAAGGATGAAGAA
NM_001190737.1      CAGGCTCGAAAACGCAAGTACTTTAAAAAGCATGAGAAGCGAATGTCAAAGGATGAAGAA
XM_005251470.1      CAGGCTCGAAAACGCAAGTACTTTAAAAAGCATGAGAAGCGAATGTCAAAGGATGAAGAA
NM_001190738.1      CAGGCTCGAAAACGCAAGTACTTTAAAAAGCATGAGAAGCGAATGTCAAAGGATGAAGAA
XM_005251467.1      CAGGCTCGAAAACGCAAGTACTTTAAAAAGCATGAGAAGCGAATGTCAAAGGATGAAGAA
NM_005596.3         CAGGCTCGAAAACGCAAGTACTTTAAAAAGCATGAGAAGCGAATGTCAAAGGATGAAGAA
XM_005251469.1      CAGGCTCGAAAACGCAAGTACTTTAAAAAGCATGAGAAGCGAATGTCAAAGGATGAAGAA
                    ************************************************************

HsCD00329404        AGAGCAGTCAAAGATGAGCTTCTCAGTGAAAAGCCTGAAATCAAACAGAAGTGGGCATCC
NM_001190737.1      AGAGCAGTCAAAGATGAGCTTCTCAGTGAAAAGCCTGAAATCAAACAGAAGTGGGCATCC
XM_005251470.1      AGAGCAGTCAAAGATGAGCTTCTCAGTGAAAAGCCTGAAATCAAACAGAAGTGGGCATCC
NM_001190738.1      AGAGCAGTCAAAGATGAGCTTCTCAGTGAAAAGCCTGAAATCAAACAGAAGTGGGCATCC
XM_005251467.1      AGAGCAGTCAAAGATGAGCTTCTCAGTGAAAAGCCTGAAATCAAACAGAAGTGGGCATCC
NM_005596.3         AGAGCAGTCAAAGATGAGCTTCTCAGTGAAAAGCCTGAAATCAAACAGAAGTGGGCATCC
XM_005251469.1      AGAGCAGTCAAAGATGAGCTTCTCAGTGAAAAGCCTGAAATCAAACAGAAGTGGGCATCC
                    ************************************************************

HsCD00329404        AGGCTCCTTGCCAAACTGCGCAAAGATATTCGCCAGGAGTATCGAGAGGACTTTGTGCTC
NM_001190737.1      AGGCTCCTTGCCAAACTGCGCAAAGATATTCGCCAGGAGTATCGAGAGGACTTTGTGCTC
XM_005251470.1      AGGCTCCTTGCCAAACTGCGCAAAGATATTCGCCAGGAGTATCGAGAGGACTTTGTGCTC
NM_001190738.1      AGGCTCCTTGCCAAACTGCGCAAAGATATTCGCCAGGAGTATCGAGAGGACTTTGTGCTC
XM_005251467.1      AGGCTCCTTGCCAAACTGCGCAAAGATATTCGCCAGGAGTATCGAGAGGACTTTGTGCTC
NM_005596.3         AGGCTCCTTGCCAAACTGCGCAAAGATATTCGCCAGGAGTATCGAGAGGACTTTGTGCTC
XM_005251469.1      AGGCTCCTTGCCAAACTGCGCAAAGATATTCGCCAGGAGTATCGAGAGGACTTTGTGCTC
                    ************************************************************

HsCD00329404        ACCGTGACTGGCAAGAAGCACCCGTGCTGTGTCTTATCCAATCCCGACCAGAAGGGTAAG
NM_001190737.1      ACCGTGACTGGCAAGAAGCACCCGTGCTGTGTCTTATCCAATCCCGACCAGAAGGGTAAG
XM_005251470.1      ACCGTGACTGGCAAGAAGCACCCGTGCTGTGTCTTATCCAATCCCGACCAGAAGGGTAAG
NM_001190738.1      ACCGTGACTGGCAAGAAGCACCCGTGCTGTGTCTTATCCAATCCCGACCAGAAGGGTAAG
XM_005251467.1      ACCGTGACTGGCAAGAAGCACCCGTGCTGTGTCTTATCCAATCCCGACCAGAAGGGTAAG
NM_005596.3         ACCGTGACTGGCAAGAAGCACCCGTGCTGTGTCTTATCCAATCCCGACCAGAAGGGTAAG
XM_005251469.1      ACCGTGACTGGCAAGAAGCACCCGTGCTGTGTCTTATCCAATCCCGACCAGAAGGGTAAG
                    ************************************************************

HsCD00329404        ATTAGGAGAATCGACTGCCTGCGACAGGCAGACAAAGTCTGGCGTCTGGATCTAGTCATG
NM_001190737.1      ATTAGGAGAATCGACTGCCTGCGACAGGCAGACAAAGTCTGGCGTCTGGATCTAGTCATG
XM_005251470.1      ATTAGGAGAATCGACTGCCTGCGACAGGCAGACAAAGTCTGGCGTCTGGATCTAGTCATG
NM_001190738.1      ATTAGGAGAATCGACTGCCTGCGACAGGCAGACAAAGTCTGGCGTCTGGATCTAGTCATG
XM_005251467.1      ATTAGGAGAATCGACTGCCTGCGACAGGCAGACAAAGTCTGGCGTCTGGATCTAGTCATG
NM_005596.3         ATTAGGAGAATCGACTGCCTGCGACAGGCAGACAAAGTCTGGCGTCTGGATCTAGTCATG
XM_005251469.1      ATTAGGAGAATCGACTGCCTGCGACAGGCAGACAAAGTCTGGCGTCTGGATCTAGTCATG
                    ************************************************************

HsCD00329404        GTGATCCTGTTCAAAGGCATCCCCTTGGAAAGTACCGATGGAGAGCGGCTCATGAAATCC
NM_001190737.1      GTGATCCTGTTCAAAGGCATCCCCTTGGAAAGTACCGATGGAGAGCGGCTCATGAAATCC
XM_005251470.1      GTGATCCTGTTCAAAGGCATCCCCTTGGAAAGTACCGATGGAGAGCGGCTCATGAAATCC
NM_001190738.1      GTGATCCTGTTCAAAGGCATCCCCTTGGAAAGTACCGATGGAGAGCGGCTCATGAAATCC
XM_005251467.1      GTGATCCTGTTCAAAGGCATCCCCTTGGAAAGTACCGATGGAGAGCGGCTCATGAAATCC
NM_005596.3         GTGATCCTGTTCAAAGGCATCCCCTTGGAAAGTACCGATGGAGAGCGGCTCATGAAATCC
XM_005251469.1      GTGATCCTGTTCAAAGGCATCCCCTTGGAAAGTACCGATGGAGAGCGGCTCATGAAATCC
                    ************************************************************

HsCD00329404        CCACATTGCACAAACCCAGCACTTTGTGTCCAGCCACATCATATCACAGTATCAGTTAAG
NM_001190737.1      CCACATTGCACAAACCCAGCACTTTGTGTCCAGCCACATCATATCACAGTATCAGTTAAG
XM_005251470.1      CCACATTGCACAAACCCAGCACTTTGTGTCCAGCCACATCATATCACAGTATCAGTTAAG
NM_001190738.1      CCACATTGCACAAACCCAGCACTTTGTGTCCAGCCACATCATATCACAGTATCAGTTAAG
XM_005251467.1      CCACATTGCACAAACCCAGCACTTTGTGTCCAGCCACATCATATCACAGTATCAGTTAAG
NM_005596.3         CCACATTGCACAAACCCAGCACTTTGTGTCCAGCCACATCATATCACAGTATCAGTTAAG
XM_005251469.1      CCACATTGCACAAACCCAGCACTTTGTGTCCAGCCACATCATATCACAGTATCAGTTAAG
                    ************************************************************

HsCD00329404        GAGCTTGATTTGTTTTTGGCATACTACGTGCAGGAGCAAGATTCTGGACAATCAGGAAGT
NM_001190737.1      GAGCTTGATTTGTTTTTGGCATACTACGTGCAGGAGCAAGATTCTGGACAATCAGGAAGT
XM_005251470.1      GAGCTTGATTTGTTTTTGGCATACTACGTGCAGGAGCAAGATTCTGGACAATCAGGAAGT
NM_001190738.1      GAGCTTGATTTGTTTTTGGCATACTACGTGCAGGAGCAAGATTCTGGACAATCAGGAAGT
XM_005251467.1      GAGCTTGATTTGTTTTTGGCATACTACGTGCAGGAGCAAGATTCTGGACAATCAGGAAGT
NM_005596.3         GAGCTTGATTTGTTTTTGGCATACTACGTGCAGGAGCAAGATTCTGGACAATCAGGAAGT
XM_005251469.1      GAGCTTGATTTGTTTTTGGCATACTACGTGCAGGAGCAAGATTCTGGACAATCAGGAAGT
                    ************************************************************

HsCD00329404        CCAAGCCACAATGATCCTGCCAAGAATCCTCCAGGTTACCTTGAGGATAGTTTTGTAAAA
NM_001190737.1      CCAAGCCACAATGATCCTGCCAAGAATCCTCCAGGTTACCTTGAGGATAGTTTTGTAAAA
XM_005251470.1      CCAAGCCACAATGATCCTGCCAAGAATCCTCCAGGTTACCTTGAGGATAGTTTTGTAAAA
NM_001190738.1      CCAAGCCACAATGATCCTGCCAAGAATCCTCCAGGTTACCTTGAGGATAGTTTTGTAAAA
XM_005251467.1      CCAAGCCACAATGATCCTGCCAAGAATCCTCCAGGTTACCTTGAGGATAGTTTTGTAAAA
NM_005596.3         CCAAGCCACAATGATCCTGCCAAGAATCCTCCAGGTTACCTTGAGGATAGTTTTGTAAAA
XM_005251469.1      CCAAGCCACAATGATCCTGCCAAGAATCCTCCAGGTTACCTTGAGGATAGTTTTGTAAAA
                    ************************************************************

HsCD00329404        TCTGGAGTCTTCAATGTATCAGAACTTGTAAGAGTATCCAGAACGCCCATAACCCAGGGA
NM_001190737.1      TCTGGAGTCTTCAATGTATCAGAACTTGTAAGAGTATCCAGAACGCCCATAACCCAGGGA
XM_005251470.1      TCTGGAGTCTTCAATGTATCAGAACTTGTAAGAGTATCCAGAACGCCCATAACCCAGGGA
NM_001190738.1      TCTGGAGTCTTCAATGTATCAGAACTTGTAAGAGTATCCAGAACGCCCATAACCCAGGGA
XM_005251467.1      TCTGGAGTCTTCAATGTATCAGAACTTGTAAGAGTATCCAGAACGCCCATAACCCAGGGA
NM_005596.3         TCTGGAGTCTTCAATGTATCAGAACTTGTAAGAGTATCCAGAACGCCCATAACCCAGGGA
XM_005251469.1      TCTGGAGTCTTCAATGTATCAGAACTTGTAAGAGTATCCAGAACGCCCATAACCCAGGGA
                    ************************************************************

HsCD00329404        ACTGGAGTCAACTTCCCAATTGGAGAAATCCCAAGCCAACCATACTATCATGACATGAAC
NM_001190737.1      ACTGGAGTCAACTTCCCAATTGGAGAAATCCCAAGCCAACCATACTATCATGACATGAAC
XM_005251470.1      ACTGGAGTCAACTTCCCAATTGGAGAAATCCCAAGCCAACCATACTATCATGACATGAAC
NM_001190738.1      ACTGGAGTCAACTTCCCAATTGGAGAAATCCCAAGCCAACCATACTATCATGACATGAAC
XM_005251467.1      ACTGGAGTCAACTTCCCAATTGGAGAAATCCCAAGCCAACCATACTATCATGACATGAAC
NM_005596.3         ACTGGAGTCAACTTCCCAATTGGAGAAATCCCAAGCCAACCATACTATCATGACATGAAC
XM_005251469.1      ACTGGAGTCAACTTCCCAATTGGAGAAATCCCAAGCCAACCATACTATCATGACATGAAC
                    ************************************************************

HsCD00329404        TCGGGGGTCAATCTTCAGAGGTCTCTGTCTTCTCCACCAAGCAGCAAAAGACCCAAAACT
NM_001190737.1      TCGGGGGTCAATCTTCAGAGGTCTCTGTCTTCTCCACCAAGCAGCAAAAGACCCAAAACT
XM_005251470.1      TCGGGGGTCAATCTTCAGAGGTCTCTGTCTTCTCCACCAAGCAGCAAAAGACCCAAAACT
NM_001190738.1      TCGGGGGTCAATCTTCAGAGGTCTCTGTCTTCTCCACCAAGCAGCAAAAGACCCAAAACT
XM_005251467.1      TCGGGGGTCAATCTTCAGAGGTCTCTGTCTTCTCCACCAAGCAGCAAAAGACCCAAAACT
NM_005596.3         TCGGGGGTCAATCTTCAGAGGTCTCTGTCTTCTCCACCAAGCAGCAAAAGACCCAAAACT
XM_005251469.1      TCGGGGGTCAATCTTCAGAGGTCTCTGTCTTCTCCACCAAGCAGCAAAAGACCCAAAACT
                    ************************************************************

HsCD00329404        ATATCCATAGATGAAAATATGGAACCAAGTCCTACAGGAGACTTTTACCCCTCTCCAAGT
NM_001190737.1      ATATCCATAGATGAAAATATGGAACCAAGTCCTACAGGAGACTTTTACCCCTCTCCAAGT
XM_005251470.1      ATATCCATAGATGAAAATATGGAACCAAGTCCTACAGGAGACTTTTACCCCTCTCCAAGT
NM_001190738.1      ATATCCATAGATGAAAATATGGAACCAAGTCCTACAGGAGACTTTTACCCCTCTCCAAGT
XM_005251467.1      ATATCCATAGATGAAAATATGGAACCAAGTCCTACAGGAGACTTTTACCCCTCTCCAAGT
NM_005596.3         ATATCCATAGATGAAAATATGGAACCAAGTCCTACAGGAGACTTTTACCCCTCTCCAAGT
XM_005251469.1      ATATCCATAGATGAAAATATGGAACCAAGTCCTACAGGAGACTTTTACCCCTCTCCAAGT
                    ************************************************************

HsCD00329404        TCACCAGCTGCTGGAAGTCGAACATGGCACGAAAGAGATCAAGATATGTCTTCTCCGACT
NM_001190737.1      TCACCAGCTGCTGGAAGTCGAACATGGCACGAAAGAGATCAAGATATGTCTTCTCCGACT
XM_005251470.1      TCACCAGCTGCTGGAAGTCGAACATGGCACGAAAGAGATCAAGATATGTCTTCTCCGACT
NM_001190738.1      TCACCAGCTGCTGGAAGTCGAACATGGCACGAAAGAGATCAAGATATGTCTTCTCCGACT
XM_005251467.1      TCACCAGCTGCTGGAAGTCGAACATGGCACGAAAGAGATCAAGATATGTCTTCTCCGACT
NM_005596.3         TCACCAGCTGCTGGAAGTCGAACATGGCACGAAAGAGATCAAGATATGTCTTCTCCGACT
XM_005251469.1      TCACCAGCTGCTGGAAGTCGAACATGGCACGAAAGAGATCAAGATATGTCTTCTCCGACT
                    ************************************************************

HsCD00329404        ACTATGAAGAAGCCTGAAAAGCCATTGTTCAGCTCTGCATCTCCACAGGATTCTTCCCCA
NM_001190737.1      ACTATGAAGAAGCCTGAAAAGCCATTGTTCAGCTCTGCATCTCCACAGGATTCTTCCCCA
XM_005251470.1      ACTATGAAGAAGCCTGAAAAGCCATTGTTCAGCTCTGCATCTCCACAGGATTCTTCCCCA
NM_001190738.1      ACTATGAAGAAGCCTGAAAAGCCATTGTTCAGCTCTGCATCTCCACAGGATTCTTCCCCA
XM_005251467.1      ACTATGAAGAAGCCTGAAAAGCCATTGTTCAGCTCTGCATCTCCACAGGATTCTTCCCCA
NM_005596.3         ACTATGAAGAAGCCTGAAAAGCCATTGTTCAGCTCTGCATCTCCACAGGATTCTTCCCCA
XM_005251469.1      ACTATGAAGAAGCCTGAAAAGCCATTGTTCAGCTCTGCATCTCCACAGGATTCTTCCCCA
                    ************************************************************

HsCD00329404        AGACTGAGCACTTTCCCCCAGCACCACCATCCCGGAATACCTGGAGTTGCACACAGTGTC
NM_001190737.1      AGACTGAGCACTTTCCCCCAGCACCACCATCCCGGAATACCTGGAGTTGCACACAGTGTC
XM_005251470.1      AGACTGAGCACTTTCCCCCAGCACCACCATCCCGGAATACCTGGAGTTGCACACAGTGTC
NM_001190738.1      AGACTGAGCACTTTCCCCCAGCACCACCATCCCGGAATACCTGGAGTTGCACACAGTGTC
XM_005251467.1      AGACTGAGCACTTTCCCCCAGCACCACCATCCCGGAATACCTGGAGTTGCACACAGTGTC
NM_005596.3         AGACTGAGCACTTTCCCCCAGCACCACCATCCCGGAATACCTGGAGTTGCACACAGTGTC
XM_005251469.1      AGACTGAGCACTTTCCCCCAGCACCACCATCCCGGAATACCTGGAGTTGCACACAGTGTC
                    ************************************************************

HsCD00329404        ATCTCAACTCGAACTCCACCTCCACCTTCACCGTTGCCATTTCCAACACAAGCTATCCTT
NM_001190737.1      ATCTCAACTCGAACTCCACCTCCACCTTCACCGTTGCCATTTCCAACACAAGCTATCCTT
XM_005251470.1      ATCTCAACTCGAACTCCACCTCCACCTTCACCGTTGCCATTTCCAACACAAGCTATCCTT
NM_001190738.1      ATCTCAACTCGAACTCCACCTCCACCTTCACCGTTGCCATTTCCAACACAAGCTATCCTT
XM_005251467.1      ATCTCAACTCGAACTCCACCTCCACCTTCACCGTTGCCATTTCCAACACAAGCTATCCTT
NM_005596.3         ATCTCAACTCGAACTCCACCTCCACCTTCACCGTTGCCATTTCCAACACAAGCTATCCTT
XM_005251469.1      ATCTCAACTCGAACTCCACCTCCACCTTCACCGTTGCCATTTCCAACACAAGCTATCCTT
                    ************************************************************

HsCD00329404        CCTCCAGCCCCATCGAGCTACTTTTCTCATCCAACAATCAGATATCCTCCCCACCTGAAT
NM_001190737.1      CCTCCAGCCCCATCGAGCTACTTTTCTCATCCAACAATCAGATATCCTCCCCACCTGAAT
XM_005251470.1      CCTCCAGCCCCATCGAGCTACTTTTCTCATCCAACAATCAGATATCCTCCCCACCTGAAT
NM_001190738.1      CCTCCAGCCCCATCGAGCTACTTTTCTCATCCAACAATCAGATATCCTCCCCACCTGAAT
XM_005251467.1      CCTCCAGCCCCATCGAGCTACTTTTCTCATCCAACAATCAGATATCCTCCCCACCTGAAT
NM_005596.3         CCTCCAGCCCCATCGAGCTACTTTTCTCATCCAACAATCAGATATCCTCCCCACCTGAAT
XM_005251469.1      CCTCCAGCCCCATCGAGCTACTTTTCTCATCCAACAATCAGATATCCTCCCCACCTGAAT
                    ************************************************************

HsCD00329404        CCTCAGGATACTCTGAAGAACTATGTACCTTCTTATGACCCATCCAGTCCACAAACCAGC
NM_001190737.1      CCTCAGGATACTCTGAAGAACTATGTACCTTCTTATGACCCATCCAGTCCACAAACCAGC
XM_005251470.1      CCTCAGGATACTCTGAAGAACTATGTACCTTCTTATGACCCATCCAGTCCACAAACCAGC
NM_001190738.1      CCTCAGGATACTCTGAAGAACTATGTACCTTCTTATGACCCATCCAGTCCACAAACCAGC
XM_005251467.1      CCTCAGGATACTCTGAAGAACTATGTACCTTCTTATGACCCATCCAGTCCACAAACCAGC
NM_005596.3         CCTCAGGATACTCTGAAGAACTATGTACCTTCTTATGACCCATCCAGTCCACAAACCAGC
XM_005251469.1      CCTCAGGATACTCTGAAGAACTATGTACCTTCTTATGACCCATCCAGTCCACAAACCAGC
                    ************************************************************

HsCD00329404        CAGTCCTGGTACCTGGGCTTG---------------------------------------
NM_001190737.1      CAGCCTAACGGCAGTGGTCAAGTAGTAGGGAAAGTGCCTGGCCATTTCACTCCTGTCTTG
XM_005251470.1      CAGCTGAGGATTTGTGACTGGACCATGAATCAAAACGGCAGGCATTTATACCCCAGTACC
NM_001190738.1      CAGTCCTGGTACCTGGGCTAG---------------------------------------
XM_005251467.1      CAGCCTAACGGCAGTGGTCAAGTAGTAGGGAAAGTGCCTGGCCATTTCACTCCTGTCTTG
NM_005596.3         CAGTCCTGGTACCTGGGCTAG---------------------------------------
XM_005251469.1      CAGCCTAACGGCAGTGGTCAAGTAGTAGGGAAAGTGCCTGGCCATTTCACTCCTGTCTTG
                    ***   :.       *.   .                                       

HsCD00329404        ------------------------------------------------------------
NM_001190737.1      GCACCCTCTCCCCATCCCAGTGCAGTGCGACCTGTGACCCTGAGCATGACAGATACTAAA
XM_005251470.1      AGTGAGGATACATTGGGAATTACTTG----GCAAAGTCCTGGTACCTGGGCTAGCTTGGT
NM_001190738.1      ------------------------------------------------------------
XM_005251467.1      GCACCCTCTCCCCATCCCAGTGCAGTGCGACCTGTGACCCTGAGCATGACAGATACTAAA
NM_005596.3         ------------------------------------------------------------
XM_005251469.1      GCACCCTCTCCCCATCCCAGTGCAGTGCGACCTGTGACCCTGAGCATGACAGATACTAAA
                                                                                

HsCD00329404        ------------------------------------------------------------
NM_001190737.1      CCCATCACTACATCCACTGAAG---------------------------CCTACACAGCC
XM_005251470.1      TCCTTTCCAAGTGTCAAATAGG---------------------------ACACCCATCTT
NM_001190738.1      ------------------------------------------------------------
XM_005251467.1      CCCATCACTACATCCACTGAAGGTGAGGCAGCTTCACCTACAGCAACCACCTACACAGCC
NM_005596.3         ------------------------------------------------------------
XM_005251469.1      CCCATCACTACATCCACTGAAG---------------------------CCTACACAGCC
                                                                                

HsCD00329404        ------------------------------------------------------------
NM_001190737.1      TCAGGCACATCTCAAGCCAATCGATATGTGGGACTAAGCCCAAGAGACCCATCCTTCCTA
XM_005251470.1      ACCGGCCAATGTCCAAAATTACGGTTTGAACATAATTGGAGAACCTTTCCTTCAAGCAGA
NM_001190738.1      ------------------------------------------------------------
XM_005251467.1      TCAGGCACATCTCAAGCCAATCGATATGTGGGACTAAGCCCAAGAGACCCATCCTTCCTA
NM_005596.3         ------------------------------------------------------------
XM_005251469.1      TCAGGCACATCTCAAGCCAATCGATATGTGGGACTAAGCCCAAGAGACCCATCCTTCCTA
                                                                                

HsCD00329404        ------------------------------------------------------------
NM_001190737.1      CATCAGCAACAGTCCTGGTACCTGGGCTAG------------------------------
XM_005251470.1      AACAAGCAACTGA-----------------------------------------------
NM_001190738.1      ------------------------------------------------------------
XM_005251467.1      CATCAGCAACAGCTGAGGATTTGTGACTGGACCATGAATCAAAACGGCAGGCATTTATAC
NM_005596.3         ------------------------------------------------------------
XM_005251469.1      CATCAGCAACAGCTGAGGATTTGTGACTGGACCATGAATCAAAACGGCAGGCATTTATAC
                                                                                

HsCD00329404        ------------------------------------------------------------
NM_001190737.1      ------------------------------------------------------------
XM_005251470.1      ------------------------------------------------------------
NM_001190738.1      ------------------------------------------------------------
XM_005251467.1      CCCAGTACCAGTGAGGATACATTGGGAATTACTTGGCAAAGTCCTGGTACCTGGGCTAGC
NM_005596.3         ------------------------------------------------------------
XM_005251469.1      CCCAGTACCAGTGAGGATACATTGGGAATTACTTGGCAAAGTCCTGGTACCTGGGCTAGC
                                                                                

HsCD00329404        ------------------------------------------------------------
NM_001190737.1      ------------------------------------------------------------
XM_005251470.1      ------------------------------------------------------------
NM_001190738.1      ------------------------------------------------------------
XM_005251467.1      TTGGTTCCTTTCCAAGTGTCAAATAGGACACCCATCTTACCGGCCAATGTCCAAAATTAC
NM_005596.3         ------------------------------------------------------------
XM_005251469.1      TTGGTTCCTTTCCAAGTGTCAAATAGGACACCCATCTTACCGGCCAATGTCCAAAATTAC
                                                                                

HsCD00329404        ---------------------------------------------------
NM_001190737.1      ---------------------------------------------------
XM_005251470.1      ---------------------------------------------------
NM_001190738.1      ---------------------------------------------------
XM_005251467.1      GGTTTGAACATAATTGGAGAACCTTTCCTTCAAGCAGAAACAAGCAACTGA
NM_005596.3         ---------------------------------------------------
XM_005251469.1      GGTTTGAACATAATTGGAGAACCTTTCCTTCAAGCAGAAACAAGCAACTGA
                                                                       

Pathways

NCI : FOXA1 transcription factor network
Reactome : Gene Expression
Reactome : RNA Polymerase I, RNA Polymerase III, and Mitochondrial Transcription
Reactome : RNA Polymerase III Abortive And Retractive Initiation
Reactome : RNA Polymerase III Transcription
Reactome : RNA Polymerase III Transcription Termination
Reactome : Transcription

Protein

SMART domain : DWA : Domain A in dwarfin family proteins
UniProt : Q5VW28
UniProt : Q6ZNF9
UniProt : O00712
UniProt : Q5VW29
HPRD : 09008

Clone

Cloning Information : 269139
HIP Master Clone ID : 142776
Original Clone ID : FLH269139.01L

Organism


TAX_ID : 9606
Species Specific ID: 4781

Genome

Chromosome : 9
Map Location : 9p24.1
Ensembl : ENSG00000147862

Reagents

Labome : NFIB-antibody