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SATB1 (Homo sapiens) in pLenti6.2/V5-DEST (V5-tagged lentiviral mammalian expression vector)

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Explanation of Terms


Gene: Gene Symbol:  SATB1
Gene Name:  SATB homeobox 1
Sequence             
Original Clone ID: FLH269349.01L
Keyword: None
Species: Homo sapiens
Type: cDNA
Vector Name: pLenti6.2/V5-DEST               Format:  FUSION
Source: HIP
Description: None
Comments: None
Mutation/
Discrepancy :
No / No
Publications: None
Authors:
HsCD00329850

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AVAILABLE
No restriction
Special MTA: None

 

Insert sequence: 2292nts        
Open reading frame : 1 to 2292
Reference Sequence Alignment

ATGGATCATTTGAACGAGGCAACTCAGGGGAAAGAACATTCAGAAATGTCTAACAATGTG
AGTGATCCGAAGGGTCCACCAGCCAAGATTGCCCGCCTGGAGCAGAACGGGAGCCCGCTA
GGAAGAGGAAGGCTTGGGAGTACAGGTGCAAAAATGCAGGGAGTGCCTTTAAAACACTCG
GGCCATCTGATGAAAACCAACCTTAGGAAAGGAACCATGCTGCCAGTTTTCTGTGTGGTG
GAACATTATGAAAACGCCATTGAATATGATTGCAAGGAGGAGCATGCAGAATTTGTGCTG
GTGAGAAAGGATATGCTTTTCAACCAGCTGATCGAAATGGCATTGCTGTCTCTAGGTTAT
TCACATAGCTCTGCTGCCCAGGCCAAAGGGCTAATCCAGGTTGGAAAGTGGAATCCAGTT
CCACTGTCTTACGTGACAGATGCCCCTGATGCTACAGTAGCAGATATGCTTCAAGATGTG
TATCATGTGGTCACATTGAAAATTCAGTTACACAGTTGCCCCAAACTAGAAGACTTGCCT
CCCGAACAATGGTCGCACACCACAGTGAGGAATGCTCTGAAGGACTTACTGAAAGATATG
AATCAGAGTTCATTGGCCAAGGAGTGCCCCCTTTCACAGAGTATGATTTCTTCCATTGTG
AACAGTACTTACTATGCAAATGTCTCAGCAGCAAAATGTCAAGAATTTGGAAGGTGGTAC
AAACATTTCAAGAAGACAAAAGATATGATGGTTGAAATGGATAGTCTTTCTGAGCTATCC
CAGCAAGGCGCCAATCATGTCAATTTTGGCCAGCAACCAGTTCCAGGGAACACAGCCGAG
CAGCCTCCATCCCCTGCGCAGCTCTCCCATGGCAGCCAGCCCTCTGTCCGGACACCTCTT
CCAAACCTGCACCCTGGGCTCGTATCAACACCTATCAGTCCTCAATTGGTCAACCAGCAG
CTGGTGATGGCTCAGCTGCTGAACCAGCAGTATGCAGTGAATAGACTTTTAGCCCAGCAG
TCCTTAAACCAACAATACTTGAACCACCCTCCCCCTGTCAGTAGATCTATGAATAAGCCT
TTGGAGCAACAGGTTTCGACCAACACAGAGGTGTCTTCCGAAATCTACCAGTGGGTACGC
GATGAACTGAAACGAGCAGGAATCTCCCAGGCGGTATTTGCACGTGTGGCTTTTAACAGA
ACTCAGGGCTTGCTTTCAGAAATCCTCCGAAAGGAAGAGGACCCCAAGACTGCATCCCAG
TCTTTGCTGGTAAACCTTCGGGCTATGCAGAATTTCTTGCAGTTACCGGAAGCTGAAAGA
GACCGAATATACCAGGACGAAAGGGAAAGGAGCTTGAATGCTGCCTCGGCCATGGGTCCT
GCCCCCCTCATCAGCACACCACCCAGCCGTCCTCCCCAGGTGAAAACAGCTACTATTGCC
ACTGAAAGGAATGGGAAACCAGAGAACAATACCATGAACATTAATGCTTCCATTTATGAT
GAGATTCAGCAGGAAATGAAGCGTGCTAAAGTGTCTCAAGCACTGTTTGCAAAGGTTGCA
GCAACCAAAAGCCAGGGATGGTTGTGCGAGCTGTTACGCTGGAAAGAAGATCCTTCTCCA
GAAAACAGAACCCTGTGGGAGAACCTCTCCATGATCCGAAGGTTCCTCAGTCTTCCTCAG
CCAGAACGTGATGCCATTTATGAACAGGAGAGCAACGCGGTGCATCACCATGGCGACAGG
CCGCCCCACATTATCCATGTTCCAGCAGAGCAGATTCAGCAACAGCAGCAGCAACAGCAA
CAGCAGCAGCAGCAGCAGCAGGCACCGCCGCCTCCACAGCCACAGCAGCAGCCACAGACA
GGCCCTCGGCTCCCCCCACGGCAACCCACGGTGGCCTCTCCAGCAGAGTCAGATGAGGAA
AACCGACAGAAGACCCGGCCACGAACAAAAATTTCAGTGGAAGCCTTGGGAATCCTCCAG
AGTTTCATACAAGACGTGGGCCTGTACCCTGACGAAGAGGCCATCCAGACTCTGTCTGCC
CAGCTCGACCTTCCCAAGTACACCATCATCAAGTTCTTTCAGAACCAGCGGTACTATCTC
AAGCACCACGGCAAACTGAAGGACAATTCCGGTTTAGAGGTCGATGTGGCAGAATATAAA
GAAGAGGAGCTGCTGAAGGATTTGGAAGAGAGTGTCCAAGATAAAAATACTAACACCCTT
TTTTCAGTGAAACTAGAAGAAGAGCTGTCAGTGGAAGGAAACACAGACATTAATACTGAT
TTGAAAGACTTG


Coding Sequence Details
Insert Sequence Verified?: N Verification Method: Insert was fully sequenced in parent vector
Reference Sequence Annotations:
Start on reference sequence 173
End on reference sequence 2464
Mutations:
None
Discrepancy:
None
5' Linker Sequence: None
3' Linker Sequence: None

 

 Recommended Growth Condition:

Distributed in bacterial strain : DH5-alpha T1 phage resistant
Antibiotic Selection: Host Type:  bacterial    Marker:  ampicillin
Host Type:  mammalian    Marker:  blasticidin
Bacterial Selection Condition:  100 ug/mL ampicillin
Growth Condition:  Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:  Commonly used conditions for ampicillin resistant plasmid clones.
Protein Expression Results: None
Recommended expression in: Not Applicable
       DyNA Vector Map

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Vector Name: pLenti6.2/V5-DEST

pLenti6.2V5-DEST in advanced viewed

Synonyms: pLenti6.2/V5-DEST
Sequencing Primer: Forward:  CMV forward
Reverse:  V5 reverse
Description: with tag/fusion/marker assay, Gateway®, acceptor (destination), recombinational cloning clone, lentiviral infection, mammalian expression expression with CMV and PGK and BlastR and AmpR and RSV and 5' splice donor and HIV-1 psi and HIV-1 RRE and 3' splice acceptor and V5 and SV40 and pUC ori and attR1 and attR2 and ccdB and CmR; blasticidin resistance in mammalian, ampicillin resistance in bacterial;
Comments: None
Size (bp): 8813
Parent Vector: None
Empty Vector: None
Properties: Gateway, acceptor (destination), lentiviral infection, mammalian expression, recombinational cloning, with tag/fusion/marker
Author Name: Invitrogen
Publications: None
Vector Map:         Vector Sequence:
Sequence:

 



Vector Features:

Type Name Description Start Position End Position
bacterial origin pUC ori pUC origin of replication 7733 8406
death cassette ccdB ccdB death cassette (removed when insert is present) 3767 3976
packaging signal HIV-1 psi HIV-1 psi packaging signal 521 565
poly-A signal SV40 SV40 polyadenylation signal 5639 5770
promoter CMV CMV promoter driving gene of interest 1809 2392
promoter PGK PGK promoter to drive selection marker in mammalian cells 4266 4771
promoter RSV RSV/5' LTR hybrid promoter 1 410
recombination site attR1 attR1 recombinational cloning site 2440 2456
recombination site attR2 attR2 recombinational cloning site 4127 4142
response element HIV-1 RRE HIV-1 Rev response element (RRE) 1075 1308
selectable marker BlastR Blasticidin resistance gene in mammalian cells 4849 5249
selectable marker CmR chloramphenicol resistance marker (removed in plasmids with insert) 2673 3329
selectable marker AmpR Ampicillin resistance gene for selection in bacteria 6728 7588
splice acceptor site 3' splice acceptor two 3' splice acceptors at 1656 and 1684 1656 1656
splice donor site 5' splice donor 5' splice donor 520 520
tag V5 C-terminal V5 epitope tag 4197 4238

 

  • Gene
  • Pathways
  • Protein
  • Clone
  • Organism
  • Genome
  • Reagents

Gene

 

Gene Symbol : SATB1
Symbol Nomenclature : SATB1
Designation : DNA-binding protein SATB1|special AT-rich sequence binding protein 1 (binds to nuclear matrix/scaffold-associating DNA)|special AT-rich sequence-binding protein 1
Full Nomenclature : SATB homeobox 1
GENEID : 6304
HGNC : 10541
MIM : 602075
Vega : OTTHUMG00000129890
Target GenBank: BC001744

 

Reference Sequence Alignment

  

HsCD00329850        ATGGATCATTTGAACGAGGCAACTCAGGGGAAAGAACATTCAGAAATGTCTAACAATGTG
NM_001131010.2      ATGGATCATTTGAACGAGGCAACTCAGGGGAAAGAACATTCAGAAATGTCTAACAATGTG
NM_001195470.1      ATGGATCATTTGAACGAGGCAACTCAGGGGAAAGAACATTCAGAAATGTCTAACAATGTG
NM_002971.4         ATGGATCATTTGAACGAGGCAACTCAGGGGAAAGAACATTCAGAAATGTCTAACAATGTG
                    ************************************************************

HsCD00329850        AGTGATCCGAAGGGTCCACCAGCCAAGATTGCCCGCCTGGAGCAGAACGGGAGCCCGCTA
NM_001131010.2      AGTGATCCGAAGGGTCCACCAGCCAAGATTGCCCGCCTGGAGCAGAACGGGAGCCCGCTA
NM_001195470.1      AGTGATCCGAAGGGTCCACCAGCCAAGATTGCCCGCCTGGAGCAGAACGGGAGCCCGCTA
NM_002971.4         AGTGATCCGAAGGGTCCACCAGCCAAGATTGCCCGCCTGGAGCAGAACGGGAGCCCGCTA
                    ************************************************************

HsCD00329850        GGAAGAGGAAGGCTTGGGAGTACAGGTGCAAAAATGCAGGGAGTGCCTTTAAAACACTCG
NM_001131010.2      GGAAGAGGAAGGCTTGGGAGTACAGGTGCAAAAATGCAGGGAGTGCCTTTAAAACACTCG
NM_001195470.1      GGAAGAGGAAGGCTTGGGAGTACAGGTGCAAAAATGCAGGGAGTGCCTTTAAAACACTCG
NM_002971.4         GGAAGAGGAAGGCTTGGGAGTACAGGTGCAAAAATGCAGGGAGTGCCTTTAAAACACTCG
                    ************************************************************

HsCD00329850        GGCCATCTGATGAAAACCAACCTTAGGAAAGGAACCATGCTGCCAGTTTTCTGTGTGGTG
NM_001131010.2      GGCCATCTGATGAAAACCAACCTTAGGAAAGGAACCATGCTGCCAGTTTTCTGTGTGGTG
NM_001195470.1      GGCCATCTGATGAAAACCAACCTTAGGAAAGGAACCATGCTGCCAGTTTTCTGTGTGGTG
NM_002971.4         GGCCATCTGATGAAAACCAACCTTAGGAAAGGAACCATGCTGCCAGTTTTCTGTGTGGTG
                    ************************************************************

HsCD00329850        GAACATTATGAAAACGCCATTGAATATGATTGCAAGGAGGAGCATGCAGAATTTGTGCTG
NM_001131010.2      GAACATTATGAAAACGCCATTGAATATGATTGCAAGGAGGAGCATGCAGAATTTGTGCTG
NM_001195470.1      GAACATTATGAAAACGCCATTGAATATGATTGCAAGGAGGAGCATGCAGAATTTGTGCTG
NM_002971.4         GAACATTATGAAAACGCCATTGAATATGATTGCAAGGAGGAGCATGCAGAATTTGTGCTG
                    ************************************************************

HsCD00329850        GTGAGAAAGGATATGCTTTTCAACCAGCTGATCGAAATGGCATTGCTGTCTCTAGGTTAT
NM_001131010.2      GTGAGAAAGGATATGCTTTTCAACCAGCTGATCGAAATGGCATTGCTGTCTCTAGGTTAT
NM_001195470.1      GTGAGAAAGGATATGCTTTTCAACCAGCTGATCGAAATGGCATTGCTGTCTCTAGGTTAT
NM_002971.4         GTGAGAAAGGATATGCTTTTCAACCAGCTGATCGAAATGGCATTGCTGTCTCTAGGTTAT
                    ************************************************************

HsCD00329850        TCACATAGCTCTGCTGCCCAGGCCAAAGGGCTAATCCAGGTTGGAAAGTGGAATCCAGTT
NM_001131010.2      TCACATAGCTCTGCTGCCCAGGCCAAAGGGCTAATCCAGGTTGGAAAGTGGAATCCAGTT
NM_001195470.1      TCACATAGCTCTGCTGCCCAGGCCAAAGGGCTAATCCAGGTTGGAAAGTGGAATCCAGTT
NM_002971.4         TCACATAGCTCTGCTGCCCAGGCCAAAGGGCTAATCCAGGTTGGAAAGTGGAATCCAGTT
                    ************************************************************

HsCD00329850        CCACTGTCTTACGTGACAGATGCCCCTGATGCTACAGTAGCAGATATGCTTCAAGATGTG
NM_001131010.2      CCACTGTCTTACGTGACAGATGCCCCTGATGCTACAGTAGCAGATATGCTTCAAGATGTG
NM_001195470.1      CCACTGTCTTACGTGACAGATGCCCCTGATGCTACAGTAGCAGATATGCTTCAAGATGTG
NM_002971.4         CCACTGTCTTACGTGACAGATGCCCCTGATGCTACAGTAGCAGATATGCTTCAAGATGTG
                    ************************************************************

HsCD00329850        TATCATGTGGTCACATTGAAAATTCAGTTACACAGTTGCCCCAAACTAGAAGACTTGCCT
NM_001131010.2      TATCATGTGGTCACATTGAAAATTCAGTTACACAGTTGCCCCAAACTAGAAGACTTGCCT
NM_001195470.1      TATCATGTGGTCACATTGAAAATTCAGTTACACAGTTGCCCCAAACTAGAAGACTTGCCT
NM_002971.4         TATCATGTGGTCACATTGAAAATTCAGTTACACAGTTGCCCCAAACTAGAAGACTTGCCT
                    ************************************************************

HsCD00329850        CCCGAACAATGGTCGCACACCACAGTGAGGAATGCTCTGAAGGACTTACTGAAAGATATG
NM_001131010.2      CCCGAACAATGGTCGCACACCACAGTGAGGAATGCTCTGAAGGACTTACTGAAAGATATG
NM_001195470.1      CCCGAACAATGGTCGCACACCACAGTGAGGAATGCTCTGAAGGACTTACTGAAAGATATG
NM_002971.4         CCCGAACAATGGTCGCACACCACAGTGAGGAATGCTCTGAAGGACTTACTGAAAGATATG
                    ************************************************************

HsCD00329850        AATCAGAGTTCATTGGCCAAGGAGTGCCCCCTTTCACAGAGTATGATTTCTTCCATTGTG
NM_001131010.2      AATCAGAGTTCATTGGCCAAGGAGTGCCCCCTTTCACAGAGTATGATTTCTTCCATTGTG
NM_001195470.1      AATCAGAGTTCATTGGCCAAGGAGTGCCCCCTTTCACAGAGTATGATTTCTTCCATTGTG
NM_002971.4         AATCAGAGTTCATTGGCCAAGGAGTGCCCCCTTTCACAGAGTATGATTTCTTCCATTGTG
                    ************************************************************

HsCD00329850        AACAGTACTTACTATGCAAATGTCTCAGCAGCAAAATGTCAAGAATTTGGAAGGTGGTAC
NM_001131010.2      AACAGTACTTACTATGCAAATGTCTCAGCAGCAAAATGTCAAGAATTTGGAAGGTGGTAC
NM_001195470.1      AACAGTACTTACTATGCAAATGTCTCAGCAGCAAAATGTCAAGAATTTGGAAGGTGGTAC
NM_002971.4         AACAGTACTTACTATGCAAATGTCTCAGCAGCAAAATGTCAAGAATTTGGAAGGTGGTAC
                    ************************************************************

HsCD00329850        AAACATTTCAAGAAGACAAAAGATATGATGGTTGAAATGGATAGTCTTTCTGAGCTATCC
NM_001131010.2      AAACATTTCAAGAAGACAAAAGATATGATGGTTGAAATGGATAGTCTTTCTGAGCTATCC
NM_001195470.1      AAACATTTCAAGAAGACAAAAGATATGATGGTTGAAATGGATAGTCTTTCTGAGCTATCC
NM_002971.4         AAACATTTCAAGAAGACAAAAGATATGATGGTTGAAATGGATAGTCTTTCTGAGCTATCC
                    ************************************************************

HsCD00329850        CAGCAAGGCGCCAATCATGTCAATTTTGGCCAGCAACCAGTTCCAGGGAACACAGCCGAG
NM_001131010.2      CAGCAAGGCGCCAATCATGTCAATTTTGGCCAGCAACCAGTTCCAGGGAACACAGCCGAG
NM_001195470.1      CAGCAAGGCGCCAATCATGTCAATTTTGGCCAGCAACCAGTTCCAGGGAACACAGCCGAG
NM_002971.4         CAGCAAGGCGCCAATCATGTCAATTTTGGCCAGCAACCAGTTCCAGGGAACACAGCCGAG
                    ************************************************************

HsCD00329850        CAGCCTCCATCCCCTGCGCAGCTCTCCCATGGCAGCCAGCCCTCTGTCCGGACACCTCTT
NM_001131010.2      CAGCCTCCATCCCCTGCGCAGCTCTCCCATGGCAGCCAGCCCTCTGTCCGGACACCTCTT
NM_001195470.1      CAGCCTCCATCCCCTGCGCAGCTCTCCCATGGCAGCCAGCCCTCTGTCCGGACACCTCTT
NM_002971.4         CAGCCTCCATCCCCTGCGCAGCTCTCCCATGGCAGCCAGCCCTCTGTCCGGACACCTCTT
                    ************************************************************

HsCD00329850        CCAAACCTGCACCCTGGGCTCGTATCAACACCTATCAGTCCTCAATTGGTCAACCAGCAG
NM_001131010.2      CCAAACCTGCACCCTGGGCTCGTATCAACACCTATCAGTCCTCAATTGGTCAACCAGCAG
NM_001195470.1      CCAAACCTGCACCCTGGGCTCGTATCAACACCTATCAGTCCTCAATTGGTCAACCAGCAG
NM_002971.4         CCAAACCTGCACCCTGGGCTCGTATCAACACCTATCAGTCCTCAATTGGTCAACCAGCAG
                    ************************************************************

HsCD00329850        CTGGTGATGGCTCAGCTGCTGAACCAGCAGTATGCAGTGAATAGACTTTTAGCCCAGCAG
NM_001131010.2      CTGGTGATGGCTCAGCTGCTGAACCAGCAGTATGCAGTGAATAGACTTTTAGCCCAGCAG
NM_001195470.1      CTGGTGATGGCTCAGCTGCTGAACCAGCAGTATGCAGTGAATAGACTTTTAGCCCAGCAG
NM_002971.4         CTGGTGATGGCTCAGCTGCTGAACCAGCAGTATGCAGTGAATAGACTTTTAGCCCAGCAG
                    ************************************************************

HsCD00329850        TCCTTAAACCAACAATACTTGAACCACCCTCCCCCTGTCAGTAGATCTATGAATAAGCCT
NM_001131010.2      TCCTTAAACCAACAATACTTGAACCACCCTCCCCCTGTCAGTAGATCTATGAATAAGCCT
NM_001195470.1      TCCTTAAACCAACAATACTTGAACCACCCTCCCCCTGTCAGTAGATCTATGAATAAGCCT
NM_002971.4         TCCTTAAACCAACAATACTTGAACCACCCTCCCCCTGTCAGTAGATCTATGAATAAGCCT
                    ************************************************************

HsCD00329850        TTGGAGCAACAGGTTTCGACCAACACAGAGGTGTCTTCCGAAATCTACCAGTGGGTACGC
NM_001131010.2      TTGGAGCAACAGGTTTCGACCAACACAGAGGTGTCTTCCGAAATCTACCAGTGGGTACGC
NM_001195470.1      TTGGAGCAACAGGTTTCGACCAACACAGAGGTGTCTTCCGAAATCTACCAGTGGGTACGC
NM_002971.4         TTGGAGCAACAGGTTTCGACCAACACAGAGGTGTCTTCCGAAATCTACCAGTGGGTACGC
                    ************************************************************

HsCD00329850        GATGAACTGAAACGAGCAGGAATCTCCCAGGCGGTATTTGCACGTGTGGCTTTTAACAGA
NM_001131010.2      GATGAACTGAAACGAGCAGGAATCTCCCAGGCGGTATTTGCACGTGTGGCTTTTAACAGA
NM_001195470.1      GATGAACTGAAACGAGCAGGAATCTCCCAGGCGGTATTTGCACGTGTGGCTTTTAACAGA
NM_002971.4         GATGAACTGAAACGAGCAGGAATCTCCCAGGCGGTATTTGCACGTGTGGCTTTTAACAGA
                    ************************************************************

HsCD00329850        ACTCAGGGCTTGCTTTCAGAAATCCTCCGAAAGGAAGAGGACCCCAAGACTGCATCCCAG
NM_001131010.2      ACTCAGGGCTTGCTTTCAGAAATCCTCCGAAAGGAAGAGGACCCCAAGACTGCATCCCAG
NM_001195470.1      ACTCAGGGCTTGCTTTCAGAAATCCTCCGAAAGGAAGAGGACCCCAAGACTGCATCCCAG
NM_002971.4         ACTCAGGGCTTGCTTTCAGAAATCCTCCGAAAGGAAGAGGACCCCAAGACTGCATCCCAG
                    ************************************************************

HsCD00329850        TCTTTGCTGGTAAACCTTCGGGCTATGCAGAATTTCTTGCAGTTACCGGAAGCTGAAAGA
NM_001131010.2      TCTTTGCTGGTAAACCTTCGGGCTATGCAGAATTTCTTGCAGTTACCGGAAGCTGAAAGA
NM_001195470.1      TCTTTGCTGGTAAACCTTCGGGCTATGCAGAATTTCTTGCAGTTACCGGAAGCTGAAAGA
NM_002971.4         TCTTTGCTGGTAAACCTTCGGGCTATGCAGAATTTCTTGCAGTTACCGGAAGCTGAAAGA
                    ************************************************************

HsCD00329850        GACCGAATATACCAGGACGAAAGGGAAAGGAGCTTGAATGCTGCCTCGGCCATGGGTCCT
NM_001131010.2      GACCGAATATACCAGGACGAAAGGGAAAGGAGCTTGAATGCTGCCTCGGCCATGGGTCCT
NM_001195470.1      GACCGAATATACCAGGACGAAAGGGAAAGGAGCTTGAATGCTGCCTCGGCCATGGGTCCT
NM_002971.4         GACCGAATATACCAGGACGAAAGGGAAAGGAGCTTGAATGCTGCCTCGGCCATGGGTCCT
                    ************************************************************

HsCD00329850        GCCCCCCTCATCAGCACACCACCCAGCCGTCCTCCCCAGGTGAAAACAGCTACTATTGCC
NM_001131010.2      GCCCCCCTCATCAGCACACCACCCAGCCGTCCTCCCCAGGTGAAAACAGCTACTATTGCC
NM_001195470.1      GCCCCCCTCATCAGCACACCACCCAGCCGTCCTCCCCAGGTGAAAACAGCTACTATTGCC
NM_002971.4         GCCCCCCTCATCAGCACACCACCCAGCCGTCCTCCCCAGGTGAAAACAGCTACTATTGCC
                    ************************************************************

HsCD00329850        ACTGAAAGGAATGGGAAACCAGAGAACAATACCATGAACATTAATGCTTCCATTTATGAT
NM_001131010.2      ACTGAAAGGAATGGGAAACCAGAGAACAATACCATGAACATTAATGCTTCCATTTATGAT
NM_001195470.1      ACTGAAAGGAATGGGAAACCAGAGAACAATACCATGAACATTAATGCTTCCATTTATGAT
NM_002971.4         ACTGAAAGGAATGGGAAACCAGAGAACAATACCATGAACATTAATGCTTCCATTTATGAT
                    ************************************************************

HsCD00329850        GAGATTCAGCAGGAAATGAAGCGTGCTAAAGTGTCTCAAGCACTGTTTGCAAAGGTTGCA
NM_001131010.2      GAGATTCAGCAGGAAATGAAGCGTGCTAAAGTGTCTCAAGCACTGTTTGCAAAGGTTGCA
NM_001195470.1      GAGATTCAGCAGGAAATGAAGCGTGCTAAAGTGTCTCAAGCACTGTTTGCAAAGGTTGCA
NM_002971.4         GAGATTCAGCAGGAAATGAAGCGTGCTAAAGTGTCTCAAGCACTGTTTGCAAAGGTTGCA
                    ************************************************************

HsCD00329850        GCAACCAAAAGCCAGGGATGGTTGTGCGAGCTGTTACGCTGGAAAGAAGATCCTTCTCCA
NM_001131010.2      GCAACCAAAAGCCAGGGATGGTTGTGCGAGCTGTTACGCTGGAAAGAAGATCCTTCTCCA
NM_001195470.1      GCAACCAAAAGCCAGGGATGGTTGTGCGAGCTGTTACGCTGGAAAGAAGATCCTTCTCCA
NM_002971.4         GCAACCAAAAGCCAGGGATGGTTGTGCGAGCTGTTACGCTGGAAAGAAGATCCTTCTCCA
                    ************************************************************

HsCD00329850        GAAAACAGAACCCTGTGGGAGAACCTCTCCATGATCCGAAGGTTCCTCAGTCTTCCTCAG
NM_001131010.2      GAAAACAGAACCCTGTGGGAGAACCTCTCCATGATCCGAAGGTTCCTCAGTCTTCCTCAG
NM_001195470.1      GAAAACAGAACCCTGTGGGAGAACCTCTCCATGATCCGAAGGTTCCTCAGTCTTCCTCAG
NM_002971.4         GAAAACAGAACCCTGTGGGAGAACCTCTCCATGATCCGAAGGTTCCTCAGTCTTCCTCAG
                    ************************************************************

HsCD00329850        CCAGAACGTGATGCCATTTATGAACAGGAGAGCAACGCGGTGCATCACCATGGCGACAGG
NM_001131010.2      CCAGAACGTGATGCCATTTATGAACAGGAGAGCAACGCGGTGCATCACCATGGCGACAGG
NM_001195470.1      CCAGAACGTGATGCCATTTATGAACAGGAGAGCAACGCGGTGCATCACCATGGCGACAGG
NM_002971.4         CCAGAACGTGATGCCATTTATGAACAGGAGAGCAACGCGGTGCATCACCATGGCGACAGG
                    ************************************************************

HsCD00329850        CCGCCCCACATTATCCATGTTCCAGCAGAGCAGATTCAG---------------------
NM_001131010.2      CCGCCCCACATTATCCATGTTCCAGCAGA----------GCAGATTCAG-----------
NM_001195470.1      CCGCCCCACATTATCCATGTTCCAGCAGA----------GCAGAT---TCAGAGCCCCTC
NM_002971.4         CCGCCCCACATTATCCATGTTCCAGCAGA----------GCAGAT---TCAG--------
                    *****************************                               

HsCD00329850        ------------------------------------------------------------
NM_001131010.2      ------------------------------------------------------------
NM_001195470.1      TCCCACCACCCTTGGGAAAGGAGAGTCTAGAGGCGTTTTCTTACCAGGCCTGCCGACCCC
NM_002971.4         ------------------------------------------------------------
                                                                                

HsCD00329850        ----------------------------CAACAGCAGCAGCAACAGCAACAGCAGCAGCA
NM_001131010.2      ----------------------------CAACAGCAGCAGCAACAGCAACAGCAGCAGCA
NM_001195470.1      TGCACCATGGCTCGGTGCTGCTCCTCAGCAACAGCAGCAGCAACAGCAACAGCAGCAGCA
NM_002971.4         ----------------------------CAACAGCAGCAGCAACAGCAACAGCAGCAGCA
                                                ********************************

HsCD00329850        GCAGCAGCAGGCACCGCCGCCTCCACAGCCACAGCAGCAGCCACAGACAGGCCCTCGGCT
NM_001131010.2      GCAGCAGCAGGCACCGCCGCCTCCACAGCCACAGCAGCAGCCACAGACAGGCCCTCGGCT
NM_001195470.1      GCAGCAGCAGGCACCGCCGCCTCCACAGCCACAGCAGCAGCCACAGACAGGCCCTCGGCT
NM_002971.4         GCAGCAGCAGGCACCGCCGCCTCCACAGCCACAGCAGCAGCCACAGACAGGCCCTCGGCT
                    ************************************************************

HsCD00329850        CCCCCCACGGCAACCCACGGTGGCCTCTCCAGCAGAGTCAGATGAGGAAAACCGACAGAA
NM_001131010.2      CCCCCCACGGCAACCCACGGTGGCCTCTCCAGCAGAGTCAGATGAGGAAAACCGACAGAA
NM_001195470.1      CCCCCCACGGCAACCCACGGTGGCCTCTCCAGCAGAGTCAGATGAGGAAAACCGACAGAA
NM_002971.4         CCCCCCACGGCAACCCACGGTGGCCTCTCCAGCAGAGTCAGATGAGGAAAACCGACAGAA
                    ************************************************************

HsCD00329850        GACCCGGCCACGAACAAAAATTTCAGTGGAAGCCTTGGGAATCCTCCAGAGTTTCATACA
NM_001131010.2      GACCCGGCCACGAACAAAAATTTCAGTGGAAGCCTTGGGAATCCTCCAGAGTTTCATACA
NM_001195470.1      GACCCGGCCACGAACAAAAATTTCAGTGGAAGCCTTGGGAATCCTCCAGAGTTTCATACA
NM_002971.4         GACCCGGCCACGAACAAAAATTTCAGTGGAAGCCTTGGGAATCCTCCAGAGTTTCATACA
                    ************************************************************

HsCD00329850        AGACGTGGGCCTGTACCCTGACGAAGAGGCCATCCAGACTCTGTCTGCCCAGCTCGACCT
NM_001131010.2      AGACGTGGGCCTGTACCCTGACGAAGAGGCCATCCAGACTCTGTCTGCCCAGCTCGACCT
NM_001195470.1      AGACGTGGGCCTGTACCCTGACGAAGAGGCCATCCAGACTCTGTCTGCCCAGCTCGACCT
NM_002971.4         AGACGTGGGCCTGTACCCTGACGAAGAGGCCATCCAGACTCTGTCTGCCCAGCTCGACCT
                    ************************************************************

HsCD00329850        TCCCAAGTACACCATCATCAAGTTCTTTCAGAACCAGCGGTACTATCTCAAGCACCACGG
NM_001131010.2      TCCCAAGTACACCATCATCAAGTTCTTTCAGAACCAGCGGTACTATCTCAAGCACCACGG
NM_001195470.1      TCCCAAGTACACCATCATCAAGTTCTTTCAGAACCAGCGGTACTATCTCAAGCACCACGG
NM_002971.4         TCCCAAGTACACCATCATCAAGTTCTTTCAGAACCAGCGGTACTATCTCAAGCACCACGG
                    ************************************************************

HsCD00329850        CAAACTGAAGGACAATTCCGGTTTAGAGGTCGATGTGGCAGAATATAAAGAAGAGGAGCT
NM_001131010.2      CAAACTGAAGGACAATTCCGGTTTAGAGGTCGATGTGGCAGAATATAAAGAAGAGGAGCT
NM_001195470.1      CAAACTGAAGGACAATTCCGGTTTAGAGGTCGATGTGGCAGAATATAAAGAAGAGGAGCT
NM_002971.4         CAAACTGAAGGACAATTCCGGTTTAGAGGTCGATGTGGCAGAATATAAAGAAGAGGAGCT
                    ************************************************************

HsCD00329850        GCTGAAGGATTTGGAAGAGAGTGTCCAAGATAAAAATACTAACACCCTTTTTTCAGTGAA
NM_001131010.2      GCTGAAGGATTTGGAAGAGAGTGTCCAAGATAAAAATACTAACACCCTTTTTTCAGTGAA
NM_001195470.1      GCTGAAGGATTTGGAAGAGAGTGTCCAAGATAAAAATACTAACACCCTTTTTTCAGTGAA
NM_002971.4         GCTGAAGGATTTGGAAGAGAGTGTCCAAGATAAAAATACTAACACCCTTTTTTCAGTGAA
                    ************************************************************

HsCD00329850        ACTAGAAGAAGAGCTGTCAGTGGAAGGAAACACAGACATTAATACTGATTTGAAAGACTT
NM_001131010.2      ACTAGAAGAAGAGCTGTCAGTGGAAGGAAACACAGACATTAATACTGATTTGAAAGACTG
NM_001195470.1      ACTAGAAGAAGAGCTGTCAGTGGAAGGAAACACAGACATTAATACTGATTTGAAAGACTG
NM_002971.4         ACTAGAAGAAGAGCTGTCAGTGGAAGGAAACACAGACATTAATACTGATTTGAAAGACTG
                    *********************************************************** 

HsCD00329850        G
NM_001131010.2      A
NM_001195470.1      A
NM_002971.4         A
                    .

Pathways

NCI : Caspase Cascade in Apoptosis
Reactome : Apoptosis
Reactome : Apoptotic cleavage of cellular proteins
Reactome : Apoptotic execution phase

Protein

SMART domain : CUT :
SMART domain : HOX : Homeodomain
UniProt : Q01826
HPRD : 03647

Clone

Cloning Information : 269349
HIP Master Clone ID : 155856
Original Clone ID : FLH269349.01L

Organism


TAX_ID : 9606
Species Specific ID: 6304

Genome

Chromosome : 3
Map Location : 3p23
Ensembl : ENSG00000182568

Reagents

Labome : SATB1-antibody