Gene:
Gene Symbol:
UL52
Gene Name:
involved in DNA encapsidation; possibly involved in capsid transport
Original Clone ID:
None
Keyword:
Full Length: Yes; Antibiotic: Gentamicin; NT position: 1--3177; AA position: 1-1059; NOTE: true ending: TTGAG (1 nucleotide removed to make sequence divisible by 3)
Species:
Human herpesvirus 1
Type:
cDNA
Vector Name:
pDONR207
Format:
FUSION
Source:
Center for Personalized Diagnostics
Description:
None
Comments:
None
Mutation / Discrepancy:
No / No
Publications:
None
Authors:
Center for Personalized Diagnostics
Xiaofang Bian
Xiaofang Bian
HhCD00594390
Price:
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AVAILABLE
No restriction
Special MTA: None
Special MTA: None
Insert sequence: 3178nts
Open reading frame: 1 to 3178
ATGGGGCAGGAAGACGGGAACCGCGGGGAGAGGCGGGCGGCCGGGACTCCCGTGGAGGTG
ACCGCGCTTTATGCGACCGACGGGTGCGTTATTACCTCTTCGATCGCCCTCCTCACAAAC
TCTCTACTGGGGGCCGAGCCGGTTTATATATTCAGCTACGACGCATACACGCACGATGGC
CGTGCCGACGGGCCCACGGAGCAAGACAGGTTCGAAGAGAGTCGGGCGCTCTACCAAGCG
TCGGGCGGGCTAAATGGCGACTCCTTCCGAGTAACCTTTTGTTTATTGGGGACGGAAGTG
GGTGGGACCCACCAGGCCCGCGGGCGAACCCGACCCATGTTCGTCTGTCGCTTCGAGCGA
GCGGACGACGTCGCCGCGCTACAGGACGCCCTGGCGCACGGGACCCCGCTACAACCGGAC
CACATCGCCGCCACCCTGGACGCGGAGGCCACGTTCGCGCTGCATGCGAACATGATCCTG
GCTCTCACCGTGGCCATCAACAACGCCAGCCCCCGCACCGGACGCGACGCCGCCGCGGCG
CAGTATGATCAGGGCGCGTCCCTACGCTCGCTCGTGGGGCGCACGTCCCTGGGACAACGC
GGCCTTACCACGCTATACGTCCACCACGAGGTGCGCGTGCTTGCCGCGTACCGCAGGGCG
TATTATGGAAGCGCGCAGAGTCCCTTCTGGTTTCTTAGCAAATTCGGGCCGGACGAAAAA
AGCCTGGTGCTCACCACTCGGTACTACCTGCTTCAGGCCCAGCGTCTGGGGGGCGCGGGG
GCCACGTACGACCTGCAGGCCATCAAGGACATCTGCGCCACCTACGCGATTCCCCACGCC
CCCCGCCCCGACACCGTCAGCGCTGCGTCCCTGACCTCGTTTGCCGCCATCACGCGGTTC
TGTTGCACGAGCCAGTACGCCCGCGGGGCCGCGGCGGCCGGGTTTCCGCTTTACGTGGAG
CGCCGTATTGCGGCCGACGTCCGCGAGACCAGTGCGCTGGAGAAGTTCATAACCCACGAT
CGCAGTTGCCTGCGCGTGTCCGACCGTGAATTCATTACGTACATCTACCTGGCCCATTTT
GAGTGTTTCAGCCCCCCGCGCCTAGCCACGCATCTTCGGGCCGTGACGACCCACGACCCC
AACCCCGCGGCCAGCACGGAGCAGCCCTCGCCCCTGGGCAGGGAGGCCGTGGAACAATTT
TTTTGTCACGTGCGCGCCCAACTGAATATCGGGGAGTACGTCAAACACAACGTGACCCCC
CGGGAGACCGTCCTGGATGGCGATACGGCCAAGGCCTACCTGCGCGCTCGCACGTACGCG
CCCGGGGCCCTGACGCCCGCCCCCGCGTATTGCGGGGCCGTGGACTCCGCCACCAAAATG
ATGGGGCGTTTGGCGGACGCCGAAAAGCTCCTGGTCCCCCGCGGGTGGCCCGCGTTTGCG
CCCGCCAGTCCCGGGGAGGACACGGCGGGCGGCACGCCGCCCCCACAGACCTGCGGAATT
GTCAAGCGCCTCCTGAGACTGGCCGCCACGGAACAGCAGGGCCCCACACCCCCGGCGATC
GCGGCGCTTATCCGTAATGCGGCGGTGCAGACTCCCCTGCCCGTCTACCGGATATCCATG
GTCCCCACGGGACAGGCATTTGCCGCGCTGGCCTGGGACGACTGGGCCCGCATAACGCGG
GACGCTCGCCTGGCCGAAGCGGTCGTGTCCGCCGAAGCGGCGGCGCACCCCGACCACGGC
GCGCTGGGCAGGCGGCTCACGGATCGCATCCGCGCCCAGGGCCCCGTGATGCCCCCTGGC
GGCCTGGATGCCGGGGGGCAGATGTACGTGAATCGCAACGAGATATTCAACGGCGCGCTG
GCAATCACAAACATCATCCTGGATCTCGACATCGCCCTGAAGGAGCCCGTCCCCTTTCGC
CGGCTCCACGAGGCCCTGGGCCACTTTAGGCGCGGGGCTCTGGCTGCGGTTCAGCTCCTG
TTTCCCGCGGCCCGCGTGGACCCCGACGCATATCCCTGTTATTTTTTCAAAAGCGCATGT
CGGCCCGGCCCGGCGTCCGTGGGTTCCGGCAGCGGACTCGGCAACGACGACGACGGGGAC
TGGTTTCCCTGCTACGACGACGCCGGTGATGAGGAGTGGGCGGAGGACCCGGGCGCCATG
GACACATCCCACGATCCCCCGGACGACGAGGTTGCCTACTTTGACCTGTGCCACGAAGTC
GGCCCCACGGCGGAACCTCGCGAAACGGATTCGCCCGTGTGTTCCTGCACCGACAAGATC
GGACTGCGGGTGTGCATGCCCGTCCCCGCCCCGTACGTCGTCCACGGTTCTCTAACGATG
CGGGGGGTGGCACGGGTCATCCAGCAGGCGGTGCTGTTGGACCGAGATTTTGTGGAGGCC
ATCGGGAGCTACGTAAAAAACTTCCTGTTGATCGATACGGGGGTGTACGCCCACGGCCAC
AGCCTGCGCTTGCCGTATTTTGCCAAAATCGCCCCCGACGGGCCTGCGTGCGGAAGGCTG
CTGCCAGTGTTTGTGATCCCCCCCGCCTGCAAAGACGTTCCGGCGTTTGTCGCCGCGCAC
GCCGACCCGCGGCGCTTCCATTTTCACGCCCCGCCCACCTATCTCGCTTCCCCCCGGGAG
ATCCGTGTCCTGCACAGCCTGGGTGGGGACTATGTGAGCTTCTTTGAAAGGAAGGCGTCC
CGCAACGCGCTGGAACACTTTGGGCGACGCGAGACCCTGACGGAGGTCCTGGGTCGGTAC
AACGTACAGCCGGATGCGGGGGGGACCGTCGAGGGGTTCGCATCGGAACTGCTGGGGCGG
ATAGTCGCGTGCATCGAAACCCACTTTCCCGAACACGCCGGCGAATATCAGGCCGTATCC
GTCCGGCGGGCCGTCAGTAAGGACGACTGGGTCCTCCTACAGCTAGTCCCCGTTCGCGGT
ACCCTGCAGCAAAGCCTGTCGTGTCTGCGCTTTAAGCACGGCCGGGCGAGTCGCGCCACG
GCGCGGACATTCGTCGCGCTGAGCGTCGGGGCCAACAACCGCCTGTGCGTGTCCTTGTGT
CAGCAGTGCTTTGCCGCCAAATGCGACAGCAACCGCCTGCACACGCTGTTTACCATTGAC
GCCGGCACGCCATGCTCGCCGTCCGTTCCCTGCAGCACCTCTCAACCGTCGTCTTGAG
Protein sequence predicted based on nucleotide sequence
MGQEDGNRGERRAAGTPVEVTALYATDGCVITSSIALLTNSLLGAEPVYIFSYDAYTHDG RADGPTEQDRFEESRALYQASGGLNGDSFRVTFCLLGTEVGGTHQARGRTRPMFVCRFER ADDVAALQDALAHGTPLQPDHIAATLDAEATFALHANMILALTVAINNASPRTGRDAAAA QYDQGASLRSLVGRTSLGQRGLTTLYVHHEVRVLAAYRRAYYGSAQSPFWFLSKFGPDEK SLVLTTRYYLLQAQRLGGAGATYDLQAIKDICATYAIPHAPRPDTVSAASLTSFAAITRF CCTSQYARGAAAAGFPLYVERRIAADVRETSALEKFITHDRSCLRVSDREFITYIYLAHF ECFSPPRLATHLRAVTTHDPNPAASTEQPSPLGREAVEQFFCHVRAQLNIGEYVKHNVTP RETVLDGDTAKAYLRARTYAPGALTPAPAYCGAVDSATKMMGRLADAEKLLVPRGWPAFA PASPGEDTAGGTPPPQTCGIVKRLLRLAATEQQGPTPPAIAALIRNAAVQTPLPVYRISM VPTGQAFAALAWDDWARITRDARLAEAVVSAEAAAHPDHGALGRRLTDRIRAQGPVMPPG GLDAGGQMYVNRNEIFNGALAITNIILDLDIALKEPVPFRRLHEALGHFRRGALAAVQLL FPAARVDPDAYPCYFFKSACRPGPASVGSGSGLGNDDDGDWFPCYDDAGDEEWAEDPGAM DTSHDPPDDEVAYFDLCHEVGPTAEPRETDSPVCSCTDKIGLRVCMPVPAPYVVHGSLTM RGVARVIQQAVLLDRDFVEAIGSYVKNFLLIDTGVYAHGHSLRLPYFAKIAPDGPACGRL LPVFVIPPACKDVPAFVAAHADPRRFHFHAPPTYLASPREIRVLHSLGGDYVSFFERKAS RNALEHFGRRETLTEVLGRYNVQPDAGGTVEGFASELLGRIVACIETHFPEHAGEYQAVS VRRAVSKDDWVLLQLVPVRGTLQQSLSCLRFKHGRASRATARTFVALSVGANNRLCVSLC QQCFAAKCDSNRLHTLFTIDAGTPCSPSVPCSTSQPSS*
Coding Sequence Details
Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None
Recommended Growth Condition:
Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:
bacterial
Marker:
gentamicin
Bacterial Selection Condition:
gentamycin
Growth Condition:
None
Comments:
None
Protein Expression Results:
None
Recommended expression in:
Not Applicable
Vector Name:
pDONR207
Synonyms:
''
Sequencing Primer:
Forward:
pDONR201-reverse
Reverse:
pDONR201-forward
Description:
Gateway®, donor (entry), recombinational cloning clone, bacterial expression expression with rrnB T2 and rrnB T1 and attP1 and attP2 and ccdB and CmR and cat_promoter-var002 and GenR and Promoter (Amp-R) and ori; gentamicin resistance in bacterial;
Comments:
None
Size (bp):
5585
Parent Vector:
None
Properties:
Gateway, bacterial expression, donor (entry), recombinational cloning
Author Name:
Invitrogen
Publications:
None
Vector Map:
Vector Sequence:
Sequence:
Vector Features:
Type
Name
Description
Start
End
CDS
GemR
confers resistance to gentamycin
3528
4061
CDS
CmR
confers resistance to chloramphenicol
1606
2265
CDS
ccdB
CcdB, a bacterial toxin that poisons DNA gyrase
959
1264
Terminator
rrnB T2
transcription terminator T2 from the E. coli rrnB gene
73
100
Terminator
rrnB T1
transcription terminator T1 from the E. coli rrnB gene
192
278
promoter
cat_promoter-var002
promoter of the E. coli cat gene encoding chloramphenicol acetyltransferase
2266
2368
promoter
Pc promoter
class 1 integron promoter
4250
4278
protein binding site
attP2
recombination site for the Gateway BP reaction
2513
2744
protein binding site
attP1
recombination site for the Gateway BP reaction
332
563
rep_origin
ori
high-copy-number ColE1/pMB1/pBR322/pUC origin of replication
4935
5523
