Gene:
Gene Symbol:
Gene Name:
Original Clone ID:
HsCD00082296
Keyword:
None
Species:
Homo sapiens
Type:
cDNA
Vector Name:
pJFT7_nHalo_DC(r4)
Format:
CLOSED (STOP codon in vector)
Source:
Center for Personalized Diagnostics
Description:
None
Comments:
None
Mutation / Discrepancy:
No / No
Publications:
None
Authors:
Center for Personalized Diagnostics
HsCD00841944
Price:
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AVAILABLE
No restriction
Special MTA: HALO
Special MTA: HALO
Insert sequence: 3315nts
Open reading frame: 1 to 3315
ATGGCTGCGATGGCGCCCGCTCTCACTGACGCAGCAGCTGAAGCACACCATATCCGGTTC
AAACTGGCTCCCCCATCCTCTACCTTGTCCCCTGGCAGTGCCGAAAATAACGGCAACGCC
AACATCCTTATTGCTGCCAACGGAACCAAAGGAAAAGCCATTGCTGCAGAGGATCCCAGC
CTAGATTTCCGAAATAATCCTACCAAGGAAGACTTGGGAAAGCTGCAACCACTGGTGGCA
TCTTATCTCTGCTCTGATGTAACATCTGTTCCCTCAAAGGAGTCTTTGAAGTTGCAAGGG
GTCTTCAGCAAGCAGACAGTCCTTAAATCTCATCCTCTCTTATCTCAGTCCTATGAACTC
CGAGCTGAGCTGTTGGGGAGACAGCCAGTTTTGGAGTTTTCCTTAGAAAATCTTAGAACC
ATGAATACGAGTGGTCAGACAGCTCTGCCACAAGCACCTGTAAATGGGTTGGCTAAGAAA
TTGACTAAAAGTTCAACACATTCTGATCATGACAATTCCACTTCCCTCAATGGGGGAAAA
CGGGCTCTCACTTCATCTGCTCTTCATGGGGGTGAAATGGGAGGATCTGAATCTGGGGAC
TTGAAGGGGGGTATGACCAATTGCACTCTTCCACATAGAAGCCTTGATGTAGAACACACA
ACTTTGTATAGCAATAATAGCACTGCAAACAAATCCTCTGTCAATTCCATGGAACAGCCG
GCACTTCAAGGAAGCAGTAGATTATCACCTGGTACAGACTCCAGCTCTAACTTGGGGGGT
GTCAAATTGGAGGGTAAAAAGTCTCCCCTGTCTTCCATTCTTTTCAGTGCTTTAGATTCT
GACACAAGGATAACAGCTTTACTGCGGCGACAGGCTGACATTGAGAGCCGTGCCCGCAGA
TTACAAAAGCGCTTACAGGTTGTGCAAGCCAAGCAGGTTGAGAGGCATATACAACATCAG
CTGGGTGGATTTTTGGAGAAGACTTTGAGCAAACTGCCAAACTTGGAATCGTTGAGGCCA
CGGAGCCAGTTGATGCTGACTCGAAAGGCTGAAGCTGCCTTGAGAAAAGCTGCCAGTGAG
ACCACCACTTCAGAGGGACTTAGCAACTTTTTGAAAAGCAATTCAATTTCAGAAGAATTG
GAGAGATTTACAGCTAGTGGCATAGCCAACTTGAGGTGCAGTGAACAGGCATTTGATTCA
GATGTCACTGACAGTAGTTCAGGAGGGGAGTCTGATATTGAAGAGGAAGAACTGACCAGA
GCTGATCCCGAGCAGCGTCATGTACCCCTGAGACGCAGGTCAGAATGGAAATGGGCTGCA
GACCGGGCAGCTATTGTCAGCCGCTGGAACTGGCTTCAGGCTCATGTTTCTGACTTGGAA
TATCGAATTCGTCAGCAAACAGACATTTACAAACAGATACGTGCTAATAAGGGGTTGATA
GTTCTTGGGGAGGTACCTCCCCCAGAGCATACAACAGACTTATTTCTTCCACTTAGTTCT
GAGGTGAAGACAGATCATGGGACTGATAAATTGATTGAGTCTGTTTCTCAGCCATTGGAA
AACCATGGTGCCCCTATTATTGGTCATATTTCAGAGTCACTGTCTACCAAATCATGTGGA
GCACTCAGACCTGTCAATGGAGTTATTAACACTCTTCAGCCTGTCTTGGCAGACCACATT
CCAGGTGACAGCTCTGATGCTGAGGAACAATTACATAAGAAGCAACGACTGAATCTCGTC
TCTTCATCATCTGATGGCACCTGTGTGGCAGCCCGGACACGTCCTGTACTGAGCTGTAAG
AAGCGGAGGCTTGTTCGACCCAACAGCATCGTTCCTCTTTCCAAGAAGGTTCACCGGAAC
AGCACAATCCGCCCTGGCTGTGATGTGAATCCCTCCTGCGCACTGTGTGGTTCAGGCAGC
ATCAACACCATGCCTCCCGAAATTCACTATGAAGCCCCTCTGTTGGAACGTCTTTCCCAG
TTGGACTCTTGTGTTCATCCTGTTCTAGCATTTCCAGATGATGTTCCCACGAGCCTGCAT
TTCCAGAGCATGCTGAAATCTCAGTGGCAGAACAAGCCTTTTGACAAAATCAAACCTCCC
AAAAAGTTATCGCTTAAGCACAGAGCACCCATGCCAGGCAGTCTGCCAGATTCAGCTCGT
AAGGACAGGCACAAATTGGTCAGCTCCTTCCTAACAACAGCCAAGCTGTCCCATCACCAA
ACCCGGCCTGACAGGACCCACAGGCAGCACTTAGACGATGTGGGGGCCGTGCCCATGGTG
GAGCGAGTGACAGCGCCAAAAGCAGAGCGCTTGCTCAACCCACCACCACCCGTGCATGAC
CCAAACCACAGCAAAATGAGATTGCGAGACCATTCATCTGAGAGAAGTGAAGTGTTGAAG
CATCACACAGACATGAGCAGTTCGAGCTACTTGGCAGCCACCCACCATCCTCCACACAGT
CCCTTGGTGCGACAGCTCTCCACCTCCTCAGATTCCCCTGCACCCGCCAGCTCTAGCTCA
CAGGTTACAGCCAGCACATCGCAGCAGCCAGTAAGGAGGAGAAGGGGAGAGAGCTCATTT
GATATTAACAACATTGTCATCCCAATGTCTGTTGCTGCAACAACTCGCGTAGAGAAACTG
CAATACAAGGAAATCCTTACGCCCAGCTGGCGGGAGGTTGATCTTCAGTCTCTGAAGGGG
AGTCCTGATGAGGAGAATGAAGAGATTGAGGACCTATCCGACGCAGCCTTCGCCGCCCTG
CATGCCAAATGTGAGGAGATGGAGAGGGCACGGTGGCTGTGGACCACGAGTGTGCCACCC
CAGCGGCGGGGCAGCAGGTCCTACAGGTCATCAGACGGCCGGACAACCCCCCAGCTGGGC
AGTGCCAACCCCTCCACCCCCCAGCCTGCCTCCCCTGATGTCAGCAGTAGCCACTCTTTG
TCAGAATACTCCCATGGTCAGTCCCCTAGGAGCCCCATTAGCCCGGAACTGCACTCAGCA
CCCCTCACCCCTGTGGCTCGGGACACTCCGCGACACTTAGCCAGTGAGGATACCCGTTGT
TCCACACCAGAGCTGGGGCTGGATGAACAGTCTGTCCAGCCCTGGGAGCGGCGGACCTTC
CCCCTGGCGCACAGTCCCCAGGCGGAGTGTGAGGACCAGCTGGATGCACAGGAGCGAGCA
GCCCGCTGCACTCGACGCACCTCAGGCAGCAAGACTGGCCGGGAGACAGAGGCAGCGCCC
ACCTCGCCTCCCATTGTCCCCCTCAAGAGTCGGCATCTGGTGGCAGCAGCCACAGCTCAG
CGCCCGACTCACAGA
Protein sequence predicted based on nucleotide sequence
MAAMAPALTDAAAEAHHIRFKLAPPSSTLSPGSAENNGNANILIAANGTKGKAIAAEDPS LDFRNNPTKEDLGKLQPLVASYLCSDVTSVPSKESLKLQGVFSKQTVLKSHPLLSQSYEL RAELLGRQPVLEFSLENLRTMNTSGQTALPQAPVNGLAKKLTKSSTHSDHDNSTSLNGGK RALTSSALHGGEMGGSESGDLKGGMTNCTLPHRSLDVEHTTLYSNNSTANKSSVNSMEQP ALQGSSRLSPGTDSSSNLGGVKLEGKKSPLSSILFSALDSDTRITALLRRQADIESRARR LQKRLQVVQAKQVERHIQHQLGGFLEKTLSKLPNLESLRPRSQLMLTRKAEAALRKAASE TTTSEGLSNFLKSNSISEELERFTASGIANLRCSEQAFDSDVTDSSSGGESDIEEEELTR ADPEQRHVPLRRRSEWKWAADRAAIVSRWNWLQAHVSDLEYRIRQQTDIYKQIRANKGLI VLGEVPPPEHTTDLFLPLSSEVKTDHGTDKLIESVSQPLENHGAPIIGHISESLSTKSCG ALRPVNGVINTLQPVLADHIPGDSSDAEEQLHKKQRLNLVSSSSDGTCVAARTRPVLSCK KRRLVRPNSIVPLSKKVHRNSTIRPGCDVNPSCALCGSGSINTMPPEIHYEAPLLERLSQ LDSCVHPVLAFPDDVPTSLHFQSMLKSQWQNKPFDKIKPPKKLSLKHRAPMPGSLPDSAR KDRHKLVSSFLTTAKLSHHQTRPDRTHRQHLDDVGAVPMVERVTAPKAERLLNPPPPVHD PNHSKMRLRDHSSERSEVLKHHTDMSSSSYLAATHHPPHSPLVRQLSTSSDSPAPASSSS QVTASTSQQPVRRRRGESSFDINNIVIPMSVAATTRVEKLQYKEILTPSWREVDLQSLKG SPDEENEEIEDLSDAAFAALHAKCEEMERARWLWTTSVPPQRRGSRSYRSSDGRTTPQLG SANPSTPQPASPDVSSSHSLSEYSHGQSPRSPISPELHSAPLTPVARDTPRHLASEDTRC STPELGLDEQSVQPWERRTFPLAHSPQAECEDQLDAQERAARCTRRTSGSKTGRETEAAP TSPPIVPLKSRHLVAAATAQRPTHR
Coding Sequence Details
Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None
Recommended Growth Condition:
Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:
bacterial
Marker:
ampicillin
Bacterial Selection Condition:
100 ug/mL ampicillin
Growth Condition:
Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:
Commonly used conditions for ampicillin resistant plasmid clones.
Protein Expression Results:
None
Recommended expression in:
Not Applicable
Vector Name:
pJFT7_nHalo_DC(r4)
Synonyms:
''
Description:
In vitro expression vector with a T7 promoter and N-terminal TEV-cleavable Halo tag; ampicillin resistance in bacteria; Gateway or Flexi cloning compatible
Comments:
One in a series of pJFT7 vectors made by J. Saul for IVTT protein expression at CPD. This vector has been modified to improve sequencing the insert with a reverse primer.
Size (bp):
6140
Parent Vector:
None
Properties:
Gateway, acceptor (destination), in vitro transcription, recombinational cloning, with tag/fusion/marker
Author Name:
Arizona State University
Joshua LaBaer
Ji Qiu
Justin Saul
Fernanda Festa
Andrea Throop
Center for Personalized Diagnostics
Joshua LaBaer
Ji Qiu
Justin Saul
Fernanda Festa
Andrea Throop
Center for Personalized Diagnostics
Publications:
None
Vector Map:
Vector Sequence:
Sequence:
Vector Features:
Type
Name
Description
Start
End
bacterial origin
ColE
ColE1 origin
3425
4107
death cassette
ccdB
ccdB death cassette (removed in plasmids containing a gene insert)
2785
2994
enhancer
CITE
CITE enhancer
17
515
protease cleavage site
TEV
TEV protease cleavage site
1422
1442
recombination site
attR1
attR1 recombination site
1458
1474
recombination site
attR2
recombination site
3145
3160
selectable marker
AmpR
ampicillin resistance
4205
4864
selectable marker
CmR
chloramphenicol resistance (removed in clones containing a gene insert)
1691
2347
ssDNA origin
f1
f1 origin
5633
5939
tag
HALO
N-terminal HALO tag
522
1409
