Gene:
Gene Symbol:
Prdm1
Gene Name:
PR domain containing 1, with ZNF domain
Original Clone ID:
FLH270107.01L
Keyword:
None
Species:
Mus musculus
Type:
cDNA
Vector Name:
pENTR223.1
Format:
FUSION
Source:
The ORFeome Collaboration
Description:
None
Comments:
None
Mutation / Discrepancy:
No / No
Publications:
None
Authors:
The ORFeome Collaboration
MmCD00297244
Price:
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AVAILABLE
No restriction
Special MTA: None
Special MTA: None
Insert sequence: 2568nts
Open reading frame: 1 to 2568
ATGAGAGAGGCTTATCTCAGATGTTGGATCTTCTCTTGGAAAAACGTGTGGGTACGACCT
TGCCAAAGGCTGCATTTTAAAACCGTGCTTCTTCAAGGCAGTCTACTTTACACGGCTTTG
GACTCTTACTCAACTGTACAAGCTGCCCCCAAGTCTAGCTCCGGCTCCGTGAAGTTTCAA
GGACTGGCAGAGACTGGGATCATGAAAATGGACATGGAGGACGCTGATATGACTTTGTGG
ACAGAGGCCGAGTTTGAAGAGAAGTGTACATACATAGTGAACGACCACCCCTGGGATTCC
GGCGCTGACGGGGGTACTTCTGTTCAAGCCGAGGCATCCTTACCAAGGAACCTGCTTTTC
AAGTATGCTGCCAACAACAGCAAAGAGGTTATTGGCGTGGTAAGTAAGGAGTACATACCG
AAGGGAACACGCTTTGGACCCCTCATCGGTGAAGTCTACACTAATGACACAGTTCCCAAG
AATGCCAACAGGAAGTATTTTTGGCGGATCTATTCCAGAGAGGAGTTCCACCACTTCATT
GATGGCTTTAATGAGGAGAAAAGCAACTGGATGCGCTACGTGAATCCAGCTCACTCTGCC
CGGGAGCAAAACCTGGCTGCCTGTCAGAACGGGATGAACATCTACTTCTACACTATTAAG
CCTATCCCTGCCAACCAGGAACTTCTTGTGTGGTATTGTCGGGACTTTGCGGAGAGGCTC
CACTACCCTTATCCTGGAGAGCTCACAGTGATAAATCTCACACAAACGGAAAGCAACCCA
AAGCAATACAGTAGTGAGAAAAATGAACTCTACCCAAAGAGTGTCCCCAAGAGAGAGTAC
AGCGTGAAAGAAATTCTAAAACTGGACTCCAATCCCTCCAAAAGGAAGGACATCTACCGT
TCCAACATTTCACCCTTCACTTTAGAAAAGGACATGGATGGCTTTCGGAAAAATGGGAGC
CCCGACATGCCCTTCTACCCTCGGGTGGTTTATCCTATCCGGGCACCTCTGCCAGAAGAC
TTTTTGAAAGCGTCCCTGGCCTATGGGATGGAGAGACCCACCTACATAACTCACAGTCCC
CTTCCGTCTTCCACAACTCCAAGTCCCCCTGCGAGCAGCAGCCCGGAGCAGAGCCTTAAG
AGCTCCAGCCCCCACAGCAGCCCGGGAAACACGGTGTCACCCCTGGCGCCAGGCCTCCCA
GAACACCGGGACTCCTACTCCTACTTGAATGTTTCCTATGGTTCCGAGGGCCTGGGCTCC
TACCCTGGCTATGCACCTGCCCCCCACCTCCCACCAGCTTTCATTCCTTCTTACAATGCT
CACTACCCCAAGTTCCTGTTGCCACCGTACGGCATTAGTTCCAATGGCTTGAGCACCATG
AACAACATCAATGGTATCAACAACTTCAGCCTCTTCCCTAGGTTGTATCCCGTCTACAGT
AACCTCCTTAGTGGCAGCAGCCTGCCTCATCCCATGCTCAATCCAGCTTCCCTACCGAGT
TCCCTGCCTACCGATGGAGCCCGGAGGCTGCTTCCACCGGAGCACCCCAAAGAGGTGCTT
ATCCCAGCACCCCACAGTGCCTTCTCCCTTACCGGGGCTGCAGCCAGCATGAAGGACGAG
AGTAGTCCCCCCAGCGGATCTCCAACGGCGGGAACTGCAGCCACGTCAGAACACGTGGTA
CAACCCAAAGCTACCTCATCAGTGATGGCGGCCCCCAGCACTGACGGAGCCATGAATCTC
ATTAAAAACAAACGAAACATGACTGGTTACAAGACTCTTCCTTACCCTCTGAAGAAACAG
AATGGCAAGATCAAGTATGAGTGCAATGTCTGTGCCAAGACGTTCGGTCAGCTCTCCAAC
CTGAAGGTCCACCTGAGAGTGCACAGTGGAGAACGGCCTTTCAAGTGCCAGACCTGCAAC
AAGGGTTTTACTCAGCTCGCCCACCTGCAGAAACACTACTTGGTACACACAGGAGAGAAG
CCACATGAGTGCCAGGTCTGCCACAAGAGATTTAGCAGCACAAGCAATCTCAAGACCCAC
CTTCGATTGCATTCTGGAGAAAAACCTTACCAATGTAAGGTGTGCCCTGCCAAGTTTACG
CAATTTGTGCACCTGAAGCTGCACAAGCGACTGCATACCCGGGAGCGGCCTCACAAGTGT
GCCCAGTGTCACAAGAGCTACATCCATCTCTGCAGCCTCAAGGTCCACCTGAAGGGCAAC
TGCCCTGCGGGCCCAGCTGCTGGGCTGCCTTTGGAGGATCTGACCCGAATCAATGAAGAA
ATTGAGAGGTTCGACATCAGCGACAATGCAGACCGTCTTGAGGACATGGAGGACAGTGTC
GATGTGACCTCCATGGTGGAGAAGGAGATTCTAGCTGTGGTCAGAAAAGAGAAAGAAGAA
ACCAGTCTGAAAGTGTCTTTGCAAAGAAACATGGGGAACGGCCTCCTCTCCTCAGGGTGC
AGCCTCTATGAGTCATCGGACCTGTCCCTCATGAAGTTGCCTCACAGCAACCCACTACCT
CTGGTGCCTGTAAAGGTCAAACAAGAAACAGTTGAACCGATGGATCCT
Protein sequence predicted based on nucleotide sequence
MREAYLRCWIFSWKNVWVRPCQRLHFKTVLLQGSLLYTALDSYSTVQAAPKSSSGSVKFQ GLAETGIMKMDMEDADMTLWTEAEFEEKCTYIVNDHPWDSGADGGTSVQAEASLPRNLLF KYAANNSKEVIGVVSKEYIPKGTRFGPLIGEVYTNDTVPKNANRKYFWRIYSREEFHHFI DGFNEEKSNWMRYVNPAHSAREQNLAACQNGMNIYFYTIKPIPANQELLVWYCRDFAERL HYPYPGELTVINLTQTESNPKQYSSEKNELYPKSVPKREYSVKEILKLDSNPSKRKDIYR SNISPFTLEKDMDGFRKNGSPDMPFYPRVVYPIRAPLPEDFLKASLAYGMERPTYITHSP LPSSTTPSPPASSSPEQSLKSSSPHSSPGNTVSPLAPGLPEHRDSYSYLNVSYGSEGLGS YPGYAPAPHLPPAFIPSYNAHYPKFLLPPYGISSNGLSTMNNINGINNFSLFPRLYPVYS NLLSGSSLPHPMLNPASLPSSLPTDGARRLLPPEHPKEVLIPAPHSAFSLTGAAASMKDE SSPPSGSPTAGTAATSEHVVQPKATSSVMAAPSTDGAMNLIKNKRNMTGYKTLPYPLKKQ NGKIKYECNVCAKTFGQLSNLKVHLRVHSGERPFKCQTCNKGFTQLAHLQKHYLVHTGEK PHECQVCHKRFSSTSNLKTHLRLHSGEKPYQCKVCPAKFTQFVHLKLHKRLHTRERPHKC AQCHKSYIHLCSLKVHLKGNCPAGPAAGLPLEDLTRINEEIERFDISDNADRLEDMEDSV DVTSMVEKEILAVVRKEKEETSLKVSLQRNMGNGLLSSGCSLYESSDLSLMKLPHSNPLP LVPVKVKQETVEPMDP
Coding Sequence Details
Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Reference Sequence Annotations:
Start on reference sequence
221
End on reference sequence
2791
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None
Recommended Growth Condition:
Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:
bacterial
Marker:
spectinomycin
Bacterial Selection Condition:
100 ug/mL spectinomycin
Growth Condition:
Growth at 37 degrees C in LB supplemented with 100 ug/mL spectinomycin.
Comments:
None
Protein Expression Results:
None
Recommended expression in:
Not Applicable
Vector Name:
pENTR223.1
Synonyms:
pDONR-223.1, pENTR223-star-Sfi
Description:
Gateway type (lambda att-type) recombinational cloning entry (master) vector; spectinomycin resistance; recombinational cloning.
Comments:
Additional information about this vector is available from the commercial website and at the ORFeome website http://orfeomecollaboration.org/vectors.php
Size (bp):
4311
Parent Vector:
None
Properties:
Gateway, donor (entry), recombinational cloning
Author Name:
Invitrogen
Publications:
None
Vector Map:
Vector Sequence:
Sequence:
Vector Features:
Type
Name
Description
Start
End
MCS
MCS
MCS (Sfi sites flank the cassette present only in no insert form)
1265
1277
bacterial origin
ori
bacterial origin of replication
1
534
negative selection marker
ccdB
ccdB (no insert form only; lost in with insert form)
1312
1617
primer site
M13 F
M13 forward primer for insert sequencing
1113
1129
primer site
T7
T7 Forward primer for insert sequencing
2902
2921
primer site
M13 reverse
M13 reverse primer for insert sequencing
2926
2942
recombination site
attL1
attL1 recombination site
1165
1264
recombination site
attL2
attL2 recombination site
2786
2885
selectable marker
CmR
chlR (no insert form only; lost in with insert form)
1959
2618
selectable marker
SpnR
spectinomycin resistance gene
3154
4164
