Gene:
Gene Symbol:
BP1041
Gene Name:
(dimethylallyl)adenosine tRNA methylthiotransferase
Original Clone ID:
BeR82-21.1
Keyword:
None
Species:
Bordetella pertussis
Type:
cDNA
Vector Name:
pET21_NESG
Format:
FUSION
Source:
Northeast Structural Genomics Consortium
Description:
None
Comments:
None
Mutation / Discrepancy:
No / No
Publications:
None
Authors:
PSI
Northeast Structural Genomics Consortium
Northeast Structural Genomics Consortium
BpCD00423312
Price:
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AVAILABLE
No restriction
Special MTA: PSI/NESG
Special MTA: PSI/NESG
Insert sequence: 1341nts
Open reading frame: 50 to 1390
GTGCGGAATTCCTCTGAATATTTTGTTTACTTTAGAAGGAGATATACATATGTATATCCG
CACCTTCGGCTGCCAGATGAACGAGTACGACTCGGACAAGATGGCCGACGTGCTGCGCGC
CGACCAGGGCCTGGAGCTGACCGACAACCCCGAGGATGCCGATGTCATCCTGTTCAACAC
CTGTTCCGTGCGCGAGAAGGCGCAGGAGAAGGTGTTCTCCGACCTGGGCCGGGTACAGCA
CCTCAAGAAGCAGAACCCCAACCTGGTGATCGGCGTGGGCGGCTGCGTGGCCAGCCAGGA
AGGCGAGGCCATCGTCAAGCGCGCGCCCTATGTCGACGTGGTGTTCGGCCCGCAGACCCT
GCACCGGCTGCCCGACCTGATCAAGCGCCGCCGCGCCCAGGGCGTGTCGCAGGTCGACAT
CAGCTTCCCCGAGATCGAGAAGTTCGACGCCCTGCCCCCGCCGCGCGTCGACGGCGCCAC
CGCGTTCGTGTCCATCATGGAAGGCTGCAGCAAGTATTGCAGCTTCTGCGTGGTGCCCTA
CACGCGCGGCGAAGAAGTGTCGCGCCCCTTCGACGACGTCCTGCTCGAGGTCGCCGACCT
GGCCGACCAGGGCGTCAAGGAAGTCACGCTGCTGGGCCAGAACGTCAACGCCTACCGCGG
CGCCATGGGCGACAGCGGCGAAATCGCCGATTTCGCCATGCTGCTGGAATACGTGCACGA
GATTCCCGGTATCGAACGGATCCGCTACACCACCTCGCATCCGAAGGAAATGACCCAGCG
CATGGTCGACGCCTACGCACGGCTGCCCAAGCTGGTGTCGTTCCTGCACCTGCCGGTGCA
GGCCGGCAGCGACCGGGTGCTGGCGGCCATGAAGCGCGGCTACACCGCGCTGGAGTTCAA
GTCCGTGGTGCGCCGCCTGCGCGCTGCGCGCCCCAGCCTGACGCTGTCCTCGGACTTCAT
CGTTGGTTTCCCGGGCGAGACCGAGGAGGACTTCCAGAAGACCATGAAGCTGATCGAGGA
CGTCGGCTTCGACACCTCGTTCTCGTTCGTGTATTCGCGCCGGCCCGGCACGCCGGCCGC
CGACCTGCACGATGACACGCCGCAGGACGTCAAGCTGCGCCGCCTGCAGCAGTTGCAGGC
GCTCATCAACCAGCAGGCCGCGGCCATCGCCCAGGGCATGATCGGCACCCGCCAGCGCGT
GCTGGTCGAAGGCCCTTCGCGGCGCGACCCCAACGAGCTGATGGGCCGTACCGAGAACAA
CCGTATCGTCAACTTTCCCGGCGTGCCGCGCCTGATCGGCCACATGGTCGACGTCGTCGT
CACCCACGCCCACACCAACTCGCTGCGCGGCCGTGTCGCCGGCATCGAACGCGACACATC
CGGAGCCGAA
Protein sequence predicted based on nucleotide sequence
MYIRTFGCQMNEYDSDKMADVLRADQGLELTDNPEDADVILFNTCSVREKAQEKVFSDLG RVQHLKKQNPNLVIGVGGCVASQEGEAIVKRAPYVDVVFGPQTLHRLPDLIKRRRAQGVS QVDISFPEIEKFDALPPPRVDGATAFVSIMEGCSKYCSFCVVPYTRGEEVSRPFDDVLLE VADLADQGVKEVTLLGQNVNAYRGAMGDSGEIADFAMLLEYVHEIPGIERIRYTTSHPKE MTQRMVDAYARLPKLVSFLHLPVQAGSDRVLAAMKRGYTALEFKSVVRRLRAARPSLTLS SDFIVGFPGETEEDFQKTMKLIEDVGFDTSFSFVYSRRPGTPAADLHDDTPQDVKLRRLQ QLQALINQQAAAIAQGMIGTRQRVLVEGPSRRDPNELMGRTENNRIVNFPGVPRLIGHMV DVVVTHAHTNSLRGRVAGIERDTSGAE
Coding Sequence Details
Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None
Recommended Growth Condition:
Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:
bacterial
Marker:
ampicillin
Bacterial Selection Condition:
100 ug/mL ampicillin
Growth Condition:
Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:
Commonly used conditions for ampicillin resistant plasmid clones.
Protein Expression Results:
ProteinExpressed: Not_Tested
ProteinPurified: Not_Tested
SolubleProtein: Not_Tested
Find experimental protocols in BeR82
Recommended expression in:
Not Applicable
Vector Name:
pET21_NESG
Synonyms:
pET21, pET21-modified, pET21Cc, pET21_NESG
Sequencing Primer:
Forward:
T7
Reverse:
T7 terminator
Description:
Bacterial (E. coli) expression vector with T7 lac promoter, adds C-terminal 6xHis tag; ampicillin resistance; restriction enzyme cloning.
Comments:
Modified Novagen pET vector-common MCS
Size (bp):
5415
Parent Vector:
None
Properties:
bacterial expression, in vitro transcription, multiple cloning site, with tag/fusion/marker
Author Name:
Gaetano T. Montleione
Thomas B. Acton
Northeast Structural Genomics Consortium
Thomas B. Acton
Northeast Structural Genomics Consortium
Publications:
PMID:
15808222
Title: Robotic cloning and Protein Production Platform of the Northeast Structural Genomics Consortium
Vector Map:
Vector Sequence:
Sequence:
Vector Features:
Type
Name
Description
Start
End
MCS
MCS
MCS (includes SphI, XbaI, BamHI, EcoRI, XhoI)
157
253
bacterial origin
ori
pBR322-type bacterial origin of replication
3180
3862
gene fragment
ROP
ROP
2580
2756
primer
T7 forward
T7 forward sequencing primer
283
298
primer
T7 reverse
T7 reverse sequencing primer
66
84
promoter
T7
T7 promoter
280
299
repressor binding site
lacO
lacO regulatory sequence
258
280
repressor protein gene
LacI
LacI
752
1768
selectable marker
AmpR
ampicillin resistance gene
3960
4619
ssDNA origin
f1 ori
f1 origin
5081
5387
tag
His
C-terminal 6xHis tag
140
157
trxn termination sequence
T7 term
T7 termination sequence
68
72
