DNASU Plasmid | RRN3 (Homo sapiens) in pENTR223 (Gateway donor/master vector)

Explanation of Terms

Gene:

Gene Symbol: RRN3

Gene Name: RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)

Original Clone ID:

ccsbBroadEn_03446

Keyword:

None

Species:

Homo sapiens

Type:

cDNA

Vector Name:

pENTR223

Format:

FUSION

Source:

The ORFeome Collaboration

Description:

Original GenBank Accession: BC132688.1,BC132690.1

Comments:

None

Mutation / Discrepancy:

No / No

Publications:

None

Authors:

Harvard Medical School
Dana-Farber Cancer Institute
Broad Institute of Harvard and Massachusetts Institute of Technology (MIT)
David E Hill
David E Root
The ORFeome Collaboration

HsCD00513525

Price:

AVAILABLE

No restriction
Special MTA: None

Insert Sequence
Protein Sequence

Insert sequence: 1954nts

Open reading frame: 1 to 1954

Reference Sequence Alignment

ATGGCGGCACCGCTGCTTCACACGCGTTTGCCGGGAGATGCGGCCGCTTCGTCCTCTGCA
GTTAAGAAGCTGGGCGCGTCGAGGACTGGGATTTCAAATATGCGTGCATTAGAGAATGAC
TTTTTCAATTCTCCCCCAAGAAAAACTGTTCGGTTTGGTGGAACTGTGACAGAAGTCTTG
CTGAAGTACAAAAAGGGTGAAACAAATGACTTTGAGTTGTTGAAGAACCAGCTGTTAGAT
CCAGACATAAAGGATGACCAGATCATCAACTGGCTGCTAGAATTCCGTTCTTCTATCATG
TACTTGACAAAAGACTTTGAGCAACTTATCAGTATTATATTAAGATTGCCTTGGTTGAAT
AGAAGTCAAACAGTAGTGGAAGAGTATTTGGCTTTTCTTGGTAATCTTGTATCAGCACAG
ACTGTTTTCCTCAGACCGTGTCTCAGCATGATTGCTTCCCATTTTGTGCCTCCCCGAGTG
ATCATTAAGGAAGGCGATGTAGATGTTTCAGATTCTGATGATGAAGATGATAATCTTCCT
GCAAATTTTGACACATGTCACAGAGCCTTGCAAATAATAGCAAGATATGTACCATCGACA
CCGTGGTTTCTCATGCCAATACTGGTGGAAAAATTTCCATTTGTTCGAAAATCAGAGAGA
ACACTGGAATGTTACGTTCATAACTTACTAAGGATTAGTGTATATTTTCCAACCTTGAGG
CATGAAATTCTGGAGCTTATTATTGAAAAACTACTCAAGTTGGATGTGAATGCATCCCGG
CAGGGTATTGAAGATGCTGAAGAAACAGCAACTCAAACTTGTGGTGGGACAGATTCCACG
GAAGGATTGTTTAATATGGATGAAGATGAAGAAACTGAACATGAAACAAAGGCTGGTCCT
GAACGGCTCGACCAGATGGTGCATCCTGTAGCCGAGCGCCTGGACATCCTGATGTCTTTG
GTTTTGTCCTACATGAAGGATGTCTGCTATGTAGATGGTAAGGTTGATAACGGCAAAACA
AAGGATCTATATCGCGACCTGATAAACATCTTTGACAAACTCCTGTTGCCCACCCATGCC
TCCTGCCATGTACAGTTTTTCATGTTTTACCTCTGTAGTTTCAAATTGGGATTCGCAGAG
GCATTTTTGGAACATCTCTGGAAAAAATTGCAGGACCCAAGTAATCCTGCCATCATCAGG
CAGGCTGCTGGAAATTATATTGGAAGCTTTTTGGCAAGAGCTAAATTTATTCCTCTTATT
ACTGTAAAATCATGCCTAGATCTTTTGGTTAACTGGCTGCACATATACCTTAATAACCAG
GATTCGGGAACAAAGGCATTCTGCGATGTTGCTCTCCATGGACCATTTTACTCAGCCTGC
CAAGCTGTGTTCTACACCTTTGTTTTTAGACACAAGCAGCTTTTGAGCGGAAACCTGAAA
GAAGGTTTGCAGTATCTTCAGAGTCTGAATTTTGAGCGGATAGTGATGAGCCAGCTAAAT
CCCCTGAAGATTTGCCTGCCCTCAGTGGTTAACTTTTTTGCTGCAATCACAAATAAGTAC
CAGCTCGTCTTCTGCTACACCATCATTGAGAGGAACAATCGCCAGATGCTGCCAGTCATT
AGGAGTACCGCTGGAGGAGACTCAGTGCAGATCTGCACAAACCCGCTGGACACCTTCTTC
CCCTTTGATCCCTGTGTGCTGAAGAGGTCAAAGAAATTCATTGATCCTATTTATCAGGTG
TGGGAAGACATGAGTGCTGAAGAGCTACAGGAGTTCAAGAAACCCATGAAAAAGGACATA
GTGGAAGATGAAGATGATGACTTTCTGAAAGGCGAAGTGCCCCAGAATGATACCGTGATT
GGGATCACACCAAGCTCCTTTGACACGCATTTCCGAAGTCCTTCAAGTAGTGTGGGCTCC
CCACCCGTGTTGTACATGCAACCCAGTCCCCTC

Protein sequence predicted based on nucleotide sequence

MAAPLLHTRLPGDAAASSSAVKKLGASRTGISNMRALENDFFNSPPRKTVRFGGTVTEVL
LKYKKGETNDFELLKNQLLDPDIKDDQIINWLLEFRSSIMYLTKDFEQLISIILRLPWLN
RSQTVVEEYLAFLGNLVSAQTVFLRPCLSMIASHFVPPRVIIKEGDVDVSDSDDEDDNLP
ANFDTCHRALQIIARYVPSTPWFLMPILVEKFPFVRKSERTLECYVHNLLRISVYFPTLR
HEILELIIEKLLKLDVNASRQGIEDAEETATQTCGGTDSTEGLFNMDEDEETEHETKAGP
ERLDQMVHPVAERLDILMSLVLSYMKDVCYVDGKVDNGKTKDLYRDLINIFDKLLLPTHA
SCHVQFFMFYLCSFKLGFAEAFLEHLWKKLQDPSNPAIIRQAAGNYIGSFLARAKFIPLI
TVKSCLDLLVNWLHIYLNNQDSGTKAFCDVALHGPFYSACQAVFYTFVFRHKQLLSGNLK
EGLQYLQSLNFERIVMSQLNPLKICLPSVVNFFAAITNKYQLVFCYTIIERNNRQMLPVI
RSTAGGDSVQICTNPLDTFFPFDPCVLKRSKKFIDPIYQVWEDMSAEELQEFKKPMKKDI
VEDEDDDFLKGEVPQNDTVIGITPSSFDTHFRSPSSSVGSPPVLYMQPSPL

Coding Sequence Details

Insert Sequence Verified?:

Verification Method:

Verified by the ORFeome collaboration

Mutations:

None

Discrepancy:

None

5' Linker Sequence:

None

3' Linker Sequence:

None

Recommended Growth Condition:

Distributed in bacterial strain:

DH5-alpha T1 phage resistant

Antibiotic Selection:

Host Type: bacterial Marker: spectinomycin

Bacterial Selection Condition: 100 ug/mL spectinomycin

Growth Condition: Growth at 37 degrees C in LB supplemented with 100 ug/mL spectinomycin.

Comments: None

Protein Expression Results:

None

Recommended expression in:

Not Applicable

Vector Name:

pENTR223

Synonyms:

pDONR223, pENTR223-XnCDSYn

Sequencing Primer:

Forward: M13F

Reverse: M13R

Description:

Gateway type (lambda att-type) recombinational cloning entry (master) vector; spectinomycin resistance; recombinational cloning.

Comments:

Additional information about this vector is available from the commercial website and at the ORFeome website http://orfeomecollaboration.org/vectors.php; also see supplemental figure 1 of the paper PubMed ID 15489335.

Size (bp):

2815

Parent Vector:

None

Properties:

Gateway, donor (entry), recombinational cloning

Author Name:

Mark Vidal

Publications:

PMID: 15489335

Title: Human ORFeome Version 1.1: A Platform for Reverse Proteomics

Vector Map:

Vector Sequence:

Sequence:

CTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGCTGATACCGCTCGCCGCAGCCGAACGACCGAGCGCAGCGAGTCAGTGAGCGAGGAAGCGGAAGAGCGCCCAATACGCAAACCGCCTCTCCCCGCGCGTTGGCCGATTCATTAATGCAGCTGGCACGACAGGTTTCCCGACTGGAAAGCGGGCAGTGAGCGCAACGCAATTAATACGCGTACCGCTAGCCAGGAAGAGTTTGTAGAAACGCAAAAAGGCCATCCGTCAGGATGGCCTTCTGCTTAGTTTGATGCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCACAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTCCGACTGAGCCTTTCGTTTTATTTGATGCCTGGCAGTTCCCTACTCTCGCGTTAACGCTAGCATGGATGTTTTCCCAGTCACGACGTTGTAAAACGACGGCCAGTCTTAAGCTCGGGCCCCAAATAATGATTTTATTTTGACTGATAGTGACCTGTTCGTTGCAACAAATTGATGAGCAATGCTTTTTTATAATGCCAACTTTGTACAAAAAAGTTGCCAACTTTCTTGTACAAAGTTGGCATTATAAGAAAGCATTGCTTATCAATTTGTTGCAACGAACAGGTCACTATCAGTCAAAATAAAATCATTATTTGCCATCCAGCTGATATCCCCTATAGTGAGTCGTATTACATGGTCATAGCTGTTTCCTGGCAGCTCTGGCCCGTGTCTCAAAATCTCTGATGTTACATTGCACAAGATAAAAATATATCATCATGCCTCCTCTAGACCAGCCAGGACAGAAATGCCTCGACTTCGCTGCTACCCAAGGTTGCCGGGTGACGCACACCGTGGAAACGGATGAAGGCACGAACCCAGTGGACATAAGCCTGTTCGGTTCGTAAGCTGTAATGCAAGTAGCGTATGCGCTCACGCAACTGGTCCAGAACCTTGACCGAACGCAGCGGTGGTAACGGCGCAGTGGCGGTTTTCATGGCTTGTTATGACTGTTTTTTTGGGGTACAGTCTATGCCTCGGGCATCCAAGCAGCAAGCGCGTTACGCCGTGGGTCGATGTTTGATGTTATGGAGCAGCAACGATGTTACGCAGCAGGGCAGTCGCCCTAAAACAAAGTTAAACATCATGAGGGAAGCGGTGATCGCCGAAGTATCGACTCAACTATCAGAGGTAGTTGGCGTCATCGAGCGCCATCTCGAACCGACGTTGCTGGCCGTACATTTGTACGGCTCCGCAGTGGATGGCGGCCTGAAGCCACACAGTGATATTGATTTGCTGGTTACGGTGACCGTAAGGCTTGATGAAACAACGCGGCGAGCTTTGATCAACGACCTTTTGGAAACTTCGGCTTCCCCTGGAGAGAGCGAGATTCTCCGCGCTGTAGAAGTCACCATTGTTGTGCACGACGACATCATTCCGTGGCGTTATCCAGCTAAGCGCGAACTGCAATTTGGAGAATGGCAGCGCAATGACATTCTTGCAGGTATCTTCGAGCCAGCCACGATCGACATTGATCTGGCTATCTTGCTGACAAAAGCAAGAGAACATAGCGTTGCCTTGGTAGGTCCAGCGGCGGAGGAACTCTTTGATCCGGTTCCTGAACAGGATCTATTTGAGGCGCTAAATGAAACCTTAACGCTATGGAACTCGCCGCCCGACTGGGCTGGCGATGAGCGAAATGTAGTGCTTACGTTGTCCCGCATTTGGTACAGCGCAGTAACCGGCAAAATCGCGCCGAAGGATGTCGCTGCCGACTGGGCAATGGAGCGCCTGCCGGCCCAGTATCAGCCCGTCATACTTGAAGCTAGACAGGCTTATCTTGGACAAGAAGAAGATCGCTTGGCCTCGCGCGCAGATCAGTTGGAAGAATTTGTCCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAACCCTCGAGCCACCCATGACCAAAATCCCTTAACGTGAGTTACGCGTCGTTCCACTGAGCGTCAGACCCCGTAGAAAAGATCAAAGGATCTTCTTGAGATCCTTTTTTTCTGCGCGTAATCTGCTGCTTGCAAACAAAAAAACCACCGCTACCAGCGGTGGTTTGTTTGCCGGATCAAGAGCTACCAACTCTTTTTCCGAAGGTAACTGGCTTCAGCAGAGCGCAGATACCAAATACTGTCCTTCTAGTGTAGCCGTAGTTAGGCCACCACTTCAAGAACTCTGTAGCACCGCCTACATACCTCGCTCTGCTAATCCTGTTACCAGTGGCTGCTGCCAGTGGCGATAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCATTGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTT

Vector Features:

Type

Name

Description

Start

End

bacterial origin

ori

bacterial origin of replication

2220

2753

gene fragment

pas

5p stem of pBR primose assembly site

gene fragment

pas prime

3p stem of pBR pas(L)

105

116

recombination site

attL1

attL1 recombination site

570

665

recombination site

attL2

attL2 recombination site

793

696

selectable marker

SpnR

spectinomycin resistance gene

1062

2072

trxn termination sequence

T1-T2

rrnBT1 and T2 terminators

510

224

Gene

Gene Symbol :

RRN3

Symbol Nomenclature :

RRN3

SYNONYM :

A-270G1.2; TIFIA

Designation :

RNA polymerase I-specific transcription initiation factor RRN3|TIF-IA|transcription initiation factor IA|transcription initiation factor TIF-IA

Full Nomenclature :

RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)

GENEID :

54700

GenBank Accession :

HQ258337

HGNC :

30346

MIM :

605121

Vega :

OTTHUMG00000129847

Target GenBank:

HQ258337

Reference Sequence Alignment

  

HsCD00513525        ATGGCGGCACCGCTGCTTCACACGCGTTTGCCGGGAGATGCGGCCGCTTCGTCCTCTGCA
NM_018427.3         ATGGCGGCACCGCTGCTTCACACGCGTTTGCCGGGAGATGCGGCCGCTTCGTCCTCTGCA
XM_005255375.1      ATGGCGGCACCGCTGCTTCACACGCGTTTGCCGGGAGATGCGGCCGCTTCGTCCTCTGCA
                    ************************************************************

HsCD00513525        GTTAAGAAGCTGGGCGCGTCGAGGACTGGGATTTCAAATATGCGTGCATTAGAGAATGAC
NM_018427.3         GTTAAGAAGCTGGGCGCGTCGAGGACTGGGATTTCAAATATGCGTGCATTAGAGAATGAC
XM_005255375.1      GTTAAGAAGCTGGGCGCGTCGAGGACTGGGATTTCAAATATGCGTGCATTAGAGAATGAC
                    ************************************************************

HsCD00513525        TTTTTCAATTCTCCCCCAAGAAAAACTGTTCGGTTTGGTGGAACTGTGACAGAAGTCTTG
NM_018427.3         TTTTTCAATTCTCCCCCAAGAAAAACTGTTCGGTTTGGTGGAACTGTGACAGAAGTCTTG
XM_005255375.1      TTTTTCAATTCTCCCCCAAGAAAAACTGTTCGGTTTGGTGGAACTGTGACAGAAGTCTTG
                    ************************************************************

HsCD00513525        CTGAAGTACAAAAAGGGTGAAACAAATGACTTTGAGTTGTTGAAGAACCAGCTGTTAGAT
NM_018427.3         CTGAAGTACAAAAAGGGTGAAACAAATGACTTTGAGTTGTTGAAGAACCAGCTGTTAGAT
XM_005255375.1      CTGAAGTACAAAAAGGGTGAAACAAATGACTTTGAGTTGTTGAAGAACCAGCTGTTAGAT
                    ************************************************************

HsCD00513525        CCAGACATAAAGGATGACCAGATCATCAACTGGCTGCTAGAATTCCGTTCTTCTATCATG
NM_018427.3         CCAGACATAAAGGATGACCAGATCATCAACTGGCTGCTAGAATTCCGTTCTTCTATCATG
XM_005255375.1      CCAGACATAAAG------------------------------------------------
                    ************                                                

HsCD00513525        TACTTGACAAAAGACTTTGAGCAACTTATCAGTATTATATTAAGATTGCCTTGGTTGAAT
NM_018427.3         TACTTGACAAAAGACTTTGAGCAACTTATCAGTATTATATTAAGATTGCCTTGGTTGAAT
XM_005255375.1      ------------------------------------------AGATTGCCTTGGTTGAAT
                                                              ******************

HsCD00513525        AGAAGTCAAACAGTAGTGGAAGAGTATTTGGCTTTTCTTGGTAATCTTGTATCAGCACAG
NM_018427.3         AGAAGTCAAACAGTAGTGGAAGAGTATTTGGCTTTTCTTGGTAATCTTGTATCAGCACAG
XM_005255375.1      AGAAGTCAAACAGTAGTGGAAGAGTATTTGGCTTTTCTTGGTAATCTTGTATCAGCACAG
                    ************************************************************

HsCD00513525        ACTGTTTTCCTCAGACCGTGTCTCAGCATGATTGCTTCCCATTTTGTGCCTCCCCGAGTG
NM_018427.3         ACTGTTTTCCTCAGACCGTGTCTCAGCATGATTGCTTCCCATTTTGTGCCTCCCCGAGTG
XM_005255375.1      ACTGTTTTCCTCAGACCGTGTCTCAGCATGATTGCTTCCCATTTTGTGCCTCCCCGAGTG
                    ************************************************************

HsCD00513525        ATCATTAAGGAAGGCGATGTAGATGTTTCAGATTCTGATGATGAAGATGATAATCTTCCT
NM_018427.3         ATCATTAAGGAAGGCGATGTAGATGTTTCAGATTCTGATGATGAAGATGATAATCTTCCT
XM_005255375.1      ATCATTAAGGAAGGCGATGTAGATGTTTCAGATTCTGATGATGAAGATGATAATCTTCCT
                    ************************************************************

HsCD00513525        GCAAATTTTGACACATGTCACAGAGCCTTGCAAATAATAGCAAGATATGTACCATCGACA
NM_018427.3         GCAAATTTTGACACATGTCACAGAGCCTTGCAAATAATAGCAAGATATGTACCATCGACA
XM_005255375.1      GCAAATTTTGACACATGTCACAGAGCCTTGCAAATAATAGCAAGATATGTACCATCGACA
                    ************************************************************

HsCD00513525        CCGTGGTTTCTCATGCCAATACTGGTGGAAAAATTTCCATTTGTTCGAAAATCAGAGAGA
NM_018427.3         CCGTGGTTTCTCATGCCAATACTGGTGGAAAAATTTCCATTTGTTCGAAAATCAGAGAGA
XM_005255375.1      CCGTGGTTTCTCATGCCAATACTGGTGGAAAAATTTCCATTTGTTCGAAAATCAGAGAGA
                    ************************************************************

HsCD00513525        ACACTGGAATGTTACGTTCATAACTTACTAAGGATTAGTGTATATTTTCCAACCTTGAGG
NM_018427.3         ACACTGGAATGTTACGTTCATAACTTACTAAGGATTAGTGTATATTTTCCAACCTTGAGG
XM_005255375.1      ACACTGGAATGTTACGTTCATAACTTACTAAGGATTAGTGTATATTTTCCAACCTTGAGG
                    ************************************************************

HsCD00513525        CATGAAATTCTGGAGCTTATTATTGAAAAACTACTCAAGTTGGATGTGAATGCATCCCGG
NM_018427.3         CATGAAATTCTGGAGCTTATTATTGAAAAACTACTCAAGTTGGATGTGAATGCATCCCGG
XM_005255375.1      CATGAAATTCTGGAGCTTATTATTGAAAAACTACTCAAGTTGGATGTGAATGCATCCCGG
                    ************************************************************

HsCD00513525        CAGGGTATTGAAGATGCTGAAGAAACAGCAACTCAAACTTGTGGTGGGACAGATTCCACG
NM_018427.3         CAGGGTATTGAAGATGCTGAAGAAACAGCAACTCAAACTTGTGGTGGGACAGATTCCACG
XM_005255375.1      CAGGGTATTGAAGATGCTGAAGAAACAGCAACTCAAACTTGTGGTGGGACAGATTCCACG
                    ************************************************************

HsCD00513525        GAAGGATTGTTTAATATGGATGAAGATGAAGAAACTGAACATGAAACAAAGGCTGGTCCT
NM_018427.3         GAAGGATTGTTTAATATGGATGAAGATGAAGAAACTGAACATGAAACAAAGGCTGGTCCT
XM_005255375.1      GAAGGATTGTTTAATATGGATGAAGATGAAGAAACTGAACATGAAACAAAGGCTGGTCCT
                    ************************************************************

HsCD00513525        GAACGGCTCGACCAGATGGTGCATCCTGTAGCCGAGCGCCTGGACATCCTGATGTCTTTG
NM_018427.3         GAACGGCTCGACCAGATGGTGCATCCTGTAGCCGAGCGCCTGGACATCCTGATGTCTTTG
XM_005255375.1      GAACGGCTCGACCAGATGGTGCATCCTGTAGCCGAGCGCCTGGACATCCTGATGTCTTTG
                    ************************************************************

HsCD00513525        GTTTTGTCCTACATGAAGGATGTCTGCTATGTAGATGGTAAGGTTGATAACGGCAAAACA
NM_018427.3         GTTTTGTCCTACATGAAGGATGTCTGCTATGTAGATGGTAAGGTTGATAACGGCAAAACA
XM_005255375.1      GTTTTGTCCTACATGAAGGATGTCTGCTATGTAGATGGTAAGGTTGATAACGGCAAAACA
                    ************************************************************

HsCD00513525        AAGGATCTATATCGCGACCTGATAAACATCTTTGACAAACTCCTGTTGCCCACCCATGCC
NM_018427.3         AAGGATCTATATCGCGACCTGATAAACATCTTTGACAAACTCCTGTTGCCCACCCATGCC
XM_005255375.1      AAGGATCTATATCGCGACCTGATAAACATCTTTGACAAACTCCTGTTGCCCACCCATGCC
                    ************************************************************

HsCD00513525        TCCTGCCATGTACAGTTTTTCATGTTTTACCTCTGTAGTTTCAAATTGGGATTCGCAGAG
NM_018427.3         TCCTGCCATGTACAGTTTTTCATGTTTTACCTCTGTAGTTTCAAATTGGGATTCGCAGAG
XM_005255375.1      TCCTGCCATGTACAGTTTTTCATGTTTTACCTCTGTAGTTTCAAATTGGGATTCGCAGAG
                    ************************************************************

HsCD00513525        GCATTTTTGGAACATCTCTGGAAAAAATTGCAGGACCCAAGTAATCCTGCCATCATCAGG
NM_018427.3         GCATTTTTGGAACATCTCTGGAAAAAATTGCAGGACCCAAGTAATCCTGCCATCATCAGG
XM_005255375.1      GCATTTTTGGAACATCTCTGGAAAAAATTGCAGGACCCAAGTAATCCTGCCATCATCAGG
                    ************************************************************

HsCD00513525        CAGGCTGCTGGAAATTATATTGGAAGCTTTTTGGCAAGAGCTAAATTTATTCCTCTTATT
NM_018427.3         CAGGCTGCTGGAAATTATATTGGAAGCTTTTTGGCAAGAGCTAAATTTATTCCTCTTATT
XM_005255375.1      CAGGCTGCTGGAAATTATATTGGAAGCTTTTTGGCAAGAGCTAAATTTATTCCTCTTATT
                    ************************************************************

HsCD00513525        ACTGTAAAATCATGCCTAGATCTTTTGGTTAACTGGCTGCACATATACCTTAATAACCAG
NM_018427.3         ACTGTAAAATCATGCCTAGATCTTTTGGTTAACTGGCTGCACATATACCTTAATAACCAG
XM_005255375.1      ACTGTAAAATCATGCCTAGATCTTTTGGTTAACTGGCTGCACATATACCTTAATAACCAG
                    ************************************************************

HsCD00513525        GATTCGGGAACAAAGGCATTCTGCGATGTTGCTCTCCATGGACCATTTTACTCAGCCTGC
NM_018427.3         GATTCGGGAACAAAGGCATTCTGCGATGTTGCTCTCCATGGACCATTTTACTCAGCCTGC
XM_005255375.1      GATTCGGGAACAAAGGCATTCTGCGATGTTGCTCTCCATGGACCATTTTACTCAGCCTGC
                    ************************************************************

HsCD00513525        CAAGCTGTGTTCTACACCTTTGTTTTTAGACACAAGCAGCTTTTGAGCGGAAACCTGAAA
NM_018427.3         CAAGCTGTGTTCTACACCTTTGTTTTTAGACACAAGCAGCTTTTGAGCGGAAACCTGAAA
XM_005255375.1      CAAGCTGTGTTCTACACCTTTGTTTTTAGACACAAGCAGCTTTTGAGCGGAAACCTGAAA
                    ************************************************************

HsCD00513525        GAAGGTTTGCAGTATCTTCAGAGTCTGAATTTTGAGCGGATAGTGATGAGCCAGCTAAAT
NM_018427.3         GAAGGTTTGCAGTATCTTCAGAGTCTGAATTTTGAGCGGATAGTGATGAGCCAGCTAAAT
XM_005255375.1      GAAGGTTTGCAGTATCTTCAGAGTCTGAATTTTGAGCGGATAGTGATGAGCCAGCTAAAT
                    ************************************************************

HsCD00513525        CCCCTGAAGATTTGCCTGCCCTCAGTGGTTAACTTTTTTGCTGCAATCACAAATAAGTAC
NM_018427.3         CCCCTGAAGATTTGCCTGCCCTCAGTGGTTAACTTTTTTGCTGCAATCACAAATAAGTAC
XM_005255375.1      CCCCTGAAGATTTGCCTGCCCTCAGTGGTTAACTTTTTTGCTGCAATCACAAATAAGTAC
                    ************************************************************

HsCD00513525        CAGCTCGTCTTCTGCTACACCATCATTGAGAGGAACAATCGCCAGATGCTGCCAGTCATT
NM_018427.3         CAGCTCGTCTTCTGCTACACCATCATTGAGAGGAACAATCGCCAGATGCTGCCAGTCATT
XM_005255375.1      CAGCTCGTCTTCTGCTACACCATCATTGAGAGGAACAATCGCCAGATGCTGCCAGTCATT
                    ************************************************************

HsCD00513525        AGGAGTACCGCTGGAGGAGACTCAGTGCAGATCTGCACAAACCCGCTGGACACCTTCTTC
NM_018427.3         AGGAGTACCGCTGGAGGAGACTCAGTGCAGATCTGCACAAACCCGCTGGACACCTTCTTC
XM_005255375.1      AGGAGTACCGCTGGAGGAGACTCAGTGCAGATCTGCACAAACCCGCTGGACACCTTCTTC
                    ************************************************************

HsCD00513525        CCCTTTGATCCCTGTGTGCTGAAGAGGTCAAAGAAATTCATTGATCCTATTTATCAGGTG
NM_018427.3         CCCTTTGATCCCTGTGTGCTGAAGAGGTCAAAGAAATTCATTGATCCTATTTATCAGGTG
XM_005255375.1      CCCTTTGATCCCTGTGTGCTGAAGAGGTCAAAGAAATTCATTGATCCTATTTATCAGGTG
                    ************************************************************

HsCD00513525        TGGGAAGACATGAGTGCTGAAGAGCTACAGGAGTTCAAGAAACCCATGAAAAAGGACATA
NM_018427.3         TGGGAAGACATGAGTGCTGAAGAGCTACAGGAGTTCAAGAAACCCATGAAAAAGGACATA
XM_005255375.1      TGGGAAGACATGAGTGCTGAAGAGCTACAGGAGTTCAAGAAACCCATGAAAAAGGACATA
                    ************************************************************

HsCD00513525        GTGGAAGATGAAGATGATGACTTTCTGAAAGGCGAAGTGCCCCAGAATGATACCGTGATT
NM_018427.3         GTGGAAGATGAAGATGATGACTTTCTGAAAGGCGAAGTGCCCCAGAATGATACCGTGATT
XM_005255375.1      GTGGAAGATGAAGATGATGACTTTCTGAAAGGCGAAGTGCCCCAGAATGATACCGTGATT
                    ************************************************************

HsCD00513525        GGGATCACACCAAGCTCCTTTGACACGCATTTCCGAAGTCCTTCAAGTAGTGTGGGCTCC
NM_018427.3         GGGATCACACCAAGCTCCTTTGACACGCATTTCCGAAGTCCTTCAAGTAGTGTGGGCTCC
XM_005255375.1      GGGATCACACCAAGCTCCTTTGACACGCATTTCCGAAGTCCTTCAAGTAGTGTGGGCTCC
                    ************************************************************

HsCD00513525        CCACCCGTGTTGTACATGCAACCCAGTCCCCTC---
NM_018427.3         CCACCCGTGTTGTACATGCAACCCAGTCCCCTCTGA
XM_005255375.1      CCACCCGTGTTGTACATGCAACCCAGTCCCCTCTGA
                    *********************************

Pathways

NCI :

mTOR signaling pathway

Panther :

General transcription by RNA polymerase I

Reactome :

Gene Expression

Reactome :

RNA Polymerase I Promoter Clearance

Reactome :

RNA Polymerase I Promoter Escape

Reactome :

RNA Polymerase I Transcription

Reactome :

RNA Polymerase I Transcription Initiation

Reactome :

RNA Polymerase I, RNA Polymerase III, and Mitochondrial Transcription

Reactome :

Transcription

Protein

HPRD :

12004

Clone

Cloning Information :

604200

Original Clone ID :

ccsbBroadEn_03446

Organism

Species Specific ID:

54700

Genome

Chromosome :

Map Location :

16p12

Ensembl :

ENSG00000085721

Reagents

Labome :

RRN3-antibody