Gene:
Gene Symbol:
CHSY3
Gene Name:
chondroitin sulfate synthase 3
Original Clone ID:
None
Keyword:
partial cds (N-terminal deletion)
Species:
Homo sapiens
Type:
cDNA
Vector Name:
pGEn3-DEST
Format:
CLOSED
Source:
Glyco-enzyme clone collection
Description:
None
Comments:
None
Mutation / Discrepancy:
Yes / No
Publications:
None
Authors:
University of Georgia
Center for Personalized Diagnostics
Arizona State University
Kelley Moremen
Center for Personalized Diagnostics
Arizona State University
Kelley Moremen
HsCD00522526
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AVAILABLE
No restriction
Special MTA: SPTA
Special MTA: SPTA
AGGAAGAGACGTGGCTCCAGCCTCTGCTCCTACTACGGTCGCTCTGCTGCTGGCCCCCGC
GCCGGCGCTCAGCAGCCGCTCCCCCAGCCCCAGTCCCGACCACGGCAGGAGCAGTCGCCG
CCCCCCGCGCGCCAGGATCTCCAGGGGCCACCGCTGCCCGAGGCAGCACCCGGGATCACC
AGTTTTCGAAGCAGCCCCTGGCAGCAGCCACCTCCGCTGCAGCAGCGGCGGCGAGGACGC
GAGCCTGAGGGCGCGACGGGGCTTCCCGGTGCTCCAGCGGCCGAGGGGGAGCCCGAGGAG
GAGGACGGGGGCGCGGCTGGGCAGCGGAGAGACGGCCGGCCGGGGAGTAGCCACAACGGC
AGCGGGGACGGGGGCGCTGCCGCCCCGAGCGCCCGACCCCGGGACTTCCTGTACGTGGGG
GTGATGACCGCGCAGAAGTACCTGGGCAGCCGCGCGCTGGCCGCGCAGCGGACCTGGGCG
CGTTTCATCCCGGGCCGCGTGGAGTTCTTTTCCAGCCAGCAGCCCCCCAACGCCGGCCAG
CCCCCGCCACCCCTGCCTGTCATCGCGCTACCGGGTGTGGACGACTCCTATCCTCCCCAG
AAAAAGTCCTTCATGATGATCAAGTACATGCACGACCACTACCTGGACAAGTATGAGTGG
TTCATGCGCGCCGACGACGATGTCTACATCAAAGGTGATAAATTAGAAGAGTTTCTTAGA
TCGCTAAACAGCAGTAAGCCTCTCTACCTGGGACAGACTGGCCTGGGGAATATTGAAGAG
CTTGGAAAGCTGGGACTGGAGCCTGGGGAAAACTTCTGTATGGGAGGACCTGGCATGATC
TTTAGCCGAGAAGTTCTCAGGAGGATGGTGCCACATATTGGTGAATGCCTTAGAGAAATG
TACACGACTCATGAGGATGTGGAAGTAGGAAGATGCGTTCGCCGTTTTGGTGGGACTCAG
TGTGTCTGGTCTTACGAGATGCAACAACTGTTCCATGAAAATTATGAACACAATCGGAAG
GGTTACATCCAAGACCTTCACAATAGCAAAATCCATGCAGCCATAACACTTCATCCCAAC
AAAAGGCCTGCATACCAATACAGGCTGCATAATTACATGCTCAGCCGCAAAATTTCTGAA
CTTCGCTACCGCACCATCCAGCTCCACAGGGAAAGTGCCCTGATGAGCAAGCTCAGTAAC
ACAGAAGTGAGCAAAGAGGACCAGCAGCTGGGAGTGATACCTTCTTTCAACCACTTCCAG
CCTCGGGAGAGAAATGAAGTGATAGAATGGGAGTTCCTGACAGGGAAGCTTCTATACTCA
GCAGCTGAGAACCAGCCCCCTCGACAGAGCCTCAGTAGCATTTTAAGAACAGCACTGGAT
GATACCGTCCTACAGGTGATGGAGATGATCAATGAGAATGCCAAGAGCAGAGGACGGCTC
ATTGACTTCAAGGAAATTCAGTATGGCTACCGCAGAGTTAACCCCATGCACGGGGTGGAG
TACATTTTGGATTTACTCCTTTTATACAAAAGACACAAGGGAAGGAAACTGACTGTGCCA
GTGAGACGTCATGCCTATCTTCAGCAGTTGTTCAGCAAGCCTTTCTTCAGAGAGACCGAA
GAGCTAGATGTCAACAGTCTTGTGGAGAGTATTAACAGTGAAACTCAGTCATTCTCCTTT
ATATCTAATTCTTTAAAGATATTATCTTCTTTTCAAGGTGCCAAAGAAATGGGAGGGCAC
AATGAAAAGAAAGTACACATTCTCGTTCCTCTCATCGGAAGGTATGACATTTTCTTGAGA
TTCATGGAGAACTTTGAAAACATGTGTCTTATCCCAAAGCAGAATGTAAAGTTGGTCATT
ATCCTTTTCAGTAGGGATTCTGGCCAAGACTCCAGCAAGCATATTGAGCTGATAAAAGGG
TACCAGAACAAGTACCCCAAAGCAGAAATGACCCTGATCCCAATGAAGGGAGAGTTTTCC
AGAGGTCTTGGTCTTGAAATGGCTTCTGCCCAGTTTGACAATGACACTTTGCTGCTATTT
TGTGATGTTGACTTGATCTTCAGAGAAGATTTTCTCCAACGATGTAGAGACAATACAATT
CAGGGACAACAGGTGTACTATCCCATCATCTTTAGCCAGTATGACCCAAAGGTAACAAAC
GGGGGAAATCCTCCCACTGATGATTACTTCATATTCTCAAAAAAGACTGGATTTTGGAGA
GACTATGGATATGGCATCACCTGTATTTACAAAAGTGATCTTCTAGGTGCAGGTGGATTT
GATACCTCAATACAAGGCTGGGGACTAGAAGATGTAGATCTCTACAATAAAGTCATTCTA
TCTGGCTTAAGGCCATTCAGAAGCCAAGAAGTAGGAGTGGTGCATATTTTCCATCCAGTT
CATTGTGATCCTAACTTGGACCCTAAGCAGTATAAGATGTGCTTAGGATCCAAGGCAAGT
ACTTTCGCCTCAACCATGCAACTGGCTGAACTCTGGCTTGAAAAACATTTAGGTGTCAGG
TACAATCGAACTCTCTCCTAG
Protein sequence predicted based on nucleotide sequence
RKRRGSSLCSYYGRSAAGPRAGAQQPLPQPQSRPRQEQSPPPARQDLQGPPLPEAAPGIT SFRSSPWQQPPPLQQRRRGREPEGATGLPGAPAAEGEPEEEDGGAAGQRRDGRPGSSHNG SGDGGAAAPSARPRDFLYVGVMTAQKYLGSRALAAQRTWARFIPGRVEFFSSQQPPNAGQ PPPPLPVIALPGVDDSYPPQKKSFMMIKYMHDHYLDKYEWFMRADDDVYIKGDKLEEFLR SLNSSKPLYLGQTGLGNIEELGKLGLEPGENFCMGGPGMIFSREVLRRMVPHIGECLREM YTTHEDVEVGRCVRRFGGTQCVWSYEMQQLFHENYEHNRKGYIQDLHNSKIHAAITLHPN KRPAYQYRLHNYMLSRKISELRYRTIQLHRESALMSKLSNTEVSKEDQQLGVIPSFNHFQ PRERNEVIEWEFLTGKLLYSAAENQPPRQSLSSILRTALDDTVLQVMEMINENAKSRGRL IDFKEIQYGYRRVNPMHGVEYILDLLLLYKRHKGRKLTVPVRRHAYLQQLFSKPFFRETE ELDVNSLVESINSETQSFSFISNSLKILSSFQGAKEMGGHNEKKVHILVPLIGRYDIFLR FMENFENMCLIPKQNVKLVIILFSRDSGQDSSKHIELIKGYQNKYPKAEMTLIPMKGEFS RGLGLEMASAQFDNDTLLLFCDVDLIFREDFLQRCRDNTIQGQQVYYPIIFSQYDPKVTN GGNPPTDDYFIFSKKTGFWRDYGYGITCIYKSDLLGAGGFDTSIQGWGLEDVDLYNKVIL SGLRPFRSQEVGVVHIFHPVHCDPNLDPKQYKMCLGSKASTFASTMQLAELWLEKHLGVR YNRTLS*
Coding Sequence Details
Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Mutations:
del@1,108
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None
Recommended Growth Condition:
Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:
bacterial
Marker:
ampicillin
Bacterial Selection Condition:
100 ug/mL ampicillin
Growth Condition:
Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:
Commonly used conditions for ampicillin resistant plasmid clones.
Protein Expression Results:
None
Recommended expression in:
Not Applicable
Vector Name:
pGEn3-DEST
Synonyms:
''
Sequencing Primer:
Forward:
pGEn3-DEST-5'F
Reverse:
pGEn1-DEST R
Description:
Mammalian expression vector with a CMV promoter and N-terminal signal sequence, AviTag, superfolder GFP and Fc fragment; ampicillin resistance in bacteria; Gateway recombinational cloning
Comments:
None
Size (bp):
7632
Parent Vector:
Name:
pXKM
Description:
Properties:
Gateway, acceptor (destination), fluorescent marker, mammalian expression, recombinational cloning, with tag/fusion/marker
Author Name:
University of Georgia
Kelley Moremen
Kelley Moremen
Publications:
None
Vector Map:
Vector Sequence:
Sequence:
Vector Features:
Type
Name
Description
Start
End
bacterial origin
ColE
ColE1 origin
1137
1804
death cassette
ccdB
ccdB death cassette (removed in vectors containing an insert)
5774
6079
gene fragment
Fc region
fragment crystallizable region (Fc region)
3832
4527
intron
artificial intron
artificial intron
2828
2960
poly-A signal
BGH pA
bovine growth hormone (BGH) polyadenylation signal
6808
7022
promoter
CMV
CMV promoter
2208
2790
recombination site
attR1
attR1 recombinational cloning site
4540
4556
recombination site
attR2
attR2 recombinational cloning site
6227
6242
recombination site
5'ITR
inverted terminal repeat sequence
1998
2127
recombination site
3'-ITR
inverted terminal repeat sequence
7110
7239
selectable marker
AmpR
Ampicillin resistance
129
1108
selectable marker
CmR
Chloramphenicol resistance (removed in vectors containing an insert)
4773
5429
signal sequence
TCM
TCM signal sequence
2977
3051
tag
His
N-terminal 10xHis tag
3055
3078
tag
AviTag
N-terminal AviTag
3079
3129
tag
GFP
N-terminal superfolder GFP
3130
3825
trxn regulatory element
WPRE
woodchuck hepatitis post-transcriptional regulatory element
6260
6801
