Gene:
Gene Symbol:
D6R
Gene Name:
temporal expression: late
Original Clone ID:
VV111-2
Keyword:
Morph, VETF-s (early transcription factor small); 2 or more aa changes
Species:
Vaccinia virus WR
Type:
cDNA
Vector Name:
pDONR222
Format:
FUSION
Source:
University of Utah
Description:
None
Comments:
None
Mutation / Discrepancy:
No / No
Publications:
None
Authors:
University of Utah
Nancy Villa
Nancy Villa
VvCD00543634
Price:
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AVAILABLE
No restriction
Special MTA: SPTA
Special MTA: SPTA
Insert sequence: 1911nts
Open reading frame: 1 to 1911
ATGAATACCGGAATCATAGATTTATTTGATAATCATGTTGATAGTATACCAACTATATTA
CCTCATCAGTTAGCTACTCTAGATTATCTAGTTAGAACTATCATAGATGAGAACAGAAGC
GTGTTATTGTTCCATATTATGGGATCAGGTAAAACAATAATCGCTTTGTTGTTCGCCTTG
GTAGCTTCCAGATTTAAAAAGGTTTACATTCTAGTGCCTAATATCAACATTTTGAAAATT
TTTAATTATAATATGGGTGTAGCTATGAACTTGTTTAATGACGAATTCATAGCTGAGAAT
ATCTTTATTCATTCCACAACAAGTTTTTATTCTCTTAATTATAACGATAACGTCATTAAT
TATAACGGATTATCTCGCTACAATAACTCTATTTTTATCGTTGATGAGGCACATAATATC
TTTGGGAATAATACTGGAGAACTTATGACCGTGATAAAAAATAAAAACAAGATTCCTTTT
CTACTATTGTCTGGATCTCCCATTACTAACACACCTAATACTCTGGGTCATATTATAGAT
TTAATGTCCGAAGAGACGATAGATTTTGGTGAGATTATTAGTCGTGGTAAGAAAGTAATT
CAGACACTTCTTAACGAACGCGGTGTGAATGTACTTAAGGATTTGCTTAAAGGAAGAATA
TCATATTACGAAATGCCTGATAAAGATCTACCAACGATAAGATATCACGGACGTAAGTTT
CTAGATACTAGAGTAGTATATTGTCACATGTCTAAACTTCAAGAGAGAGATTATATGATT
ACTAGACGACAGCTATGTTATCATGAAATGTTTGATAAAAATATGTATAACGTGTCAATG
GCAGTATTGGGACAACTTAATCTGATGAATAATTTAGATACTTTATTTCAGGAACAGGAT
AAGGAATTGTACCCAAATCTGAAAATAAATAATGGCGTGTTATACGGAGAAGAATTGGTA
ACGTTAAACATTAGTTCCAAATTTAAATACTTTATTAATCGGATACAGACACTCAACGGA
AAACATTTTATATACTTTTCTAATTCTACATATGGCGGATTGGTAATTAAATATATCATG
CTCAGTAATGGATATTCTGAATATAATGGTTCTCAGGGAACTAATCCACATATGATAAAC
GGCAAACCAAAAACATTTGCTATCGTTACTAGTAAAATGAAATCGTCTTTAGAGGATCTA
TTAGATGTGTATAATTCTCCTGAAAACGATGATGGTAGTCAATTGATGTTTTTGTTTTCG
TCAAACATTATGTCCGAATCCTATACTCTGAAAGAGGTAAGGCATATTTGGTTTATGACT
ATCCCAGATACTTTTTCTCAATACAACCAAATTCTTGGACGATCTATTAGAAAATTCTCT
TACGCCGATATTTCTGAACCAGTTAATGTATATCTTTTAGCCGCCGTATATTCCGATTTC
AATGACGAAGTAACGTCATTAAACGATTACACACAGGATGAATTGATTAATGTTTTACCA
TTTGACATCAAAAAGCTGTTATATCTAAAATTTAAGACTAAAGAAACGAATAGAATATAC
TCTATTCTTCAAGAGATGTCTGAAACGTATTCTCTTCCACCACATCCATCAATTGTAAAA
GTTTTATTGGGAGAATTGGTCAGACAATTTTTTTATAATAATTCTCGTATTAAGTATAAC
GACTCCAAGTTACTTAAAATGGTTACATCAGTTATAAAAAATAAAGAAGACGCTAGGAAT
TACATAGATGATATTGTAAACGGTCACTTCTTTGTATCGAATAAAGTATTTGATAAATCT
CTTTTATACAAATACGAAAACGATATTATTACAGTACCGTTTAGACTTTCCTACGAACCA
TTTGTTTGGGGAGTTAACTTTCGTAAAGAATATAACGTGGTATCTTCTCCA
Protein sequence predicted based on nucleotide sequence
MNTGIIDLFDNHVDSIPTILPHQLATLDYLVRTIIDENRSVLLFHIMGSGKTIIALLFAL VASRFKKVYILVPNINILKIFNYNMGVAMNLFNDEFIAENIFIHSTTSFYSLNYNDNVIN YNGLSRYNNSIFIVDEAHNIFGNNTGELMTVIKNKNKIPFLLLSGSPITNTPNTLGHIID LMSEETIDFGEIISRGKKVIQTLLNERGVNVLKDLLKGRISYYEMPDKDLPTIRYHGRKF LDTRVVYCHMSKLQERDYMITRRQLCYHEMFDKNMYNVSMAVLGQLNLMNNLDTLFQEQD KELYPNLKINNGVLYGEELVTLNISSKFKYFINRIQTLNGKHFIYFSNSTYGGLVIKYIM LSNGYSEYNGSQGTNPHMINGKPKTFAIVTSKMKSSLEDLLDVYNSPENDDGSQLMFLFS SNIMSESYTLKEVRHIWFMTIPDTFSQYNQILGRSIRKFSYADISEPVNVYLLAAVYSDF NDEVTSLNDYTQDELINVLPFDIKKLLYLKFKTKETNRIYSILQEMSETYSLPPHPSIVK VLLGELVRQFFYNNSRIKYNDSKLLKMVTSVIKNKEDARNYIDDIVNGHFFVSNKVFDKS LLYKYENDIITVPFRLSYEPFVWGVNFRKEYNVVSSP
Coding Sequence Details
Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None
Recommended Growth Condition:
Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:
bacterial
Marker:
kanamycin
Bacterial Selection Condition:
50ug/mL kanamycin
Growth Condition:
Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:
Conditions for Gateway-type vectors in recombined (with insert) form and other kanamycin resistant vectors.
Protein Expression Results:
None
Recommended expression in:
Not Applicable
Vector Name:
pDONR222
Synonyms:
''
Sequencing Primer:
Forward:
Unknown
Reverse:
Unknown
Description:
Gateway®, donor (entry), recombinational cloning clone with rrnB T2 and rrnB T1 and M13 forward and attP1 and ccdB and CmR and cat_promoter-var002 and attP2 and T7 promoter and M13 reverse and KanR and TetR and ori; kanamycin resistance in bacterial;
Comments:
None
Size (bp):
4718
Parent Vector:
None
Properties:
Gateway, donor (entry), recombinational cloning
Author Name:
Invitrogen
Publications:
None
Vector Map:
Vector Sequence:
Sequence:
Vector Features:
Type
Name
Description
Start
End
CDS
KanR
confers resistance to kanamycin in bacteria or G418 (Geneticin) in eukaryotes
2899
3714
CDS
ccdB
CcdB, a bacterial toxin that poisons DNA gyrase
987
1292
CDS
CmR
confers resistance to chloramphenicol
1612
2295
Terminator
rrnB T2
transcription terminator T2 from the E. coli rrnB gene
58
85
Terminator
rrnB T1
transcription terminator T1 from the E. coli rrnB gene
177
263
primer_bind
M13 forward
common sequencing primer, one of multiple similar variants
327
343
primer_bind
M13 reverse
common sequencing primer, one of multiple similar variants
2816
2832
promoter
cat_promoter-var002
promoter of the E. coli cat gene encoding chloramphenicol acetyltransferase
2296
2398
promoter
T7 promoter
promoter for bacteriophage T7 RNA polymerase
2793
2811
promoter
tetR and tetA promoters
overlapping promoters for bacterial tetR and tetA
3722
3777
protein binding site
attP1
recombination site for the Gateway BP reaction
360
591
protein binding site
attP2
recombination site for the Gateway BP reaction
2543
2774
rep_origin
ori
high-copy-number ColE1/pMB1/pBR322/pUC origin of replication
4104
4692
