Gene:
Gene Symbol:
SNCAIP
Gene Name:
synuclein, alpha interacting protein
Original Clone ID:
None
Keyword:
None
Species:
Homo sapiens
Type:
cDNA
Vector Name:
pANT7_cGST
Format:
FUSION
Source:
Center for Personalized Diagnostics
Description:
None
Comments:
None
Mutation / Discrepancy:
No / No
Publications:
None
Authors:
Center for Personalized Diagnostics
HsCD00631196
Price:
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AVAILABLE
No restriction
Special MTA: None
Special MTA: None
Insert sequence: 3048nts
Open reading frame: 1 to 3048
ATGGAAGCCCCTGAATACCTTGATTTGGATGAAATTGACTTTAGTGATGACATATCTGAC
AATAGGAGTCAAGGGAACAGGCTACAAAAGCTTGGATTGGAGGACACAGACAGGGAAGAT
GCAATGGGCTTTGGTTCCCATAGGGCCAAACTGACAGTAGTTGCTGCCCTGGGAGCTTGC
CATTGTCCTGAGAATGAGTATTCAGTCACATCACTCAAGACGATCCCAGAACTGTGCCGA
AGATGTGATACGCAAAACGAAGACAGATCAGTTTCTAGCTCTAGCTGGAATTGTGGCATC
TCAACTCTTATTACAAACACGCAAAAGCCCACAGGAATCGCTGATGTGTACAGTAAGTTC
CGCCCAGTGAAGCGGGTTTCGCCACTGAAACATCAGCCAGAGACTCTGGAGAACAATGAA
AGTGATGACCAAAAGAACCAGAAAGTGGTTGAGTACCAGAAAGGGGGTGAGTCTGACCTG
GGCCCCCAGCCTCAGGAGCTTGGCCCTGGAGATGGAGTGGGCGGCCCACCAGGTAAGAGC
TCTGAGCCCAGCACATCGCTGGGTGAACTGGAGCACTACGACCTCGACATGGATGAGATT
CTGGATGTGCCTTATATTAAATCCAGTCAGCAGCTTGCCTCTTTTACCAAGGTGACTTCA
GAAAAAAGAATTTTGGGCTTATGCACAACCATCAATGGCCTTTTTGGCAAAGCCTGCTCT
ACAGGAAGTTCTGAGAGCTCATCATCCAACATGGCACCATTTTGTGTTCTTTCTCCCGTG
AAAAGCCCTCACTTGAGAAAAGCATCAGCTGTCATCCACGACCAGCACAAGCTGTCCACT
GAAGAAACCGAGATCTCACCTCCTCTGGTTAAATGTGGCTCTGCATATGAGCCTGAAAAC
CAGAGTAAAGACTTCCTAAACAAGACATTTAGTGATCCTCATGGTCGAAAAGTTGAGAAG
ACAACACCAGACTGCCAGCTCAGGGCCTTCCACCTACAATCCTCAGCAGCAGAATCCAAA
CCAGAAGAGCAGGTCAGTGGCCTAAACCGGACCAGCTCCCAAGGCCCAGAAGAAAGGAGT
GAGTATCTGAAAAAAGTGAAAAGCATCTTGAACATTGTTAAAGAAGGACAGATCTCTCTC
CTGCCACACCTAGCTGCAGACAATCTAGACAAAATTCACGACGAAAATGGAAACAATCTA
TTACATATTGCGGCGTCACAGGGACACGCAGAGTGTCTACAGCACCTCACTTCTTTGATG
GGAGAAGACTGCCTCAATGAGCGCAACACTGAGAAGTTGACTCCAGCAGGCCTGGCCATT
AAGAATGGTCAGTTGGAGTGCGTACGCTGGATGGTGAGCGAAACAGAAGCCATTGCAGAA
CTGAGTTGTTCTAAGGATTTTCCAAGCCTTATTCATTACGCAGGTTGCTATGGCCAGGAA
AAGATTCTTCTGTGGCTTCTTCAGTTTATGCAAGAGCAGGGCATCTCGTTGGATGAAGTA
GACCAGGATGGCAACAGTGCCGTTCACGTAGCCTCACAGCATGGCTACCTTGGATGCATA
CAGACCTTGGTTGAATATGGAGCAAATGTCACCATGCAGAACCACGCTGGGGAAAAGCCC
TCCCAGAGCGCCGAGCGGCAGGGGCACACCCTGTGCTCCAGGTACCTGGTGGTGGTGGAG
ACCTGCATGTCGCTGGCCTCTCAAGTGGTGAAGTTAACCAAGCAGCTAAAGGAACAAACA
GTAGAACGTGTCACGCTGCAGAACCAACTCCAACAATTTCTAGAAGCCCAGAAATCAGAG
GGCAAGTCACTCCCTTCTTCACCCAGTTCACCATCCTCACCTGCCTCCAGAAAGTCCCAG
TGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGAG
GGGATTCAGGTTCTTGGAAGCCTGTCAGCCTCCAGCCGGGCTAGACCCAAAGCAAAAGAT
GGAGATTCTGATAAAATCTTACGCCAGTTATTGGGAAAGGAAATCTCAGAAAATGTCTGC
ACCCAGGAAAAACTGTCCTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAA
AAGATCCCACTGGAGAAGAGGGAACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGG
TCACTGAGTGAGTCTGACACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCAGTG
AGGAAGGGTGACCGACCAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGC
GCAGAAAGCCTGCACCTGATGATTAAGAAACACACCTTGGCATCAGGGGGACGCAGGTTT
CCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCACAGCCCATCTCCCACCTCAGAG
AGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAG
CCCTCTGGTGACCCTCAGCAGCCCAGCCCTGACAGTACTGCTGCCCAGAAAGTTGCCACA
AGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCAAGCGTAGGACATCTCAGAACTTAAAA
CTGAGAGTTACCTTTGAGGAGCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACTGAAT
GGAGAAAAAGACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCG
GGGGATCAACTGAAAAGGCCTTTTGGAGCCTTTCGATCTATCATGGAGACACTAAGTGGC
AACCAAAACAATAATAATAACTACCAGGCAGCCAACCAGCTGAAAACCTCTACATTGCCC
TTGACCTCACTTGGGAGGAAGACAGATGCCAAGGGAAACCCTGCCAGCTCCGCTAGCAAA
GGAAAGAATAAGGCAGAAATGTACAGCAGCTGCATCAATCTTTCCTCTAACATGCTGATT
GAAGAGCATCTGTGTAACGACACACGGCATAATGACATCAATAGAAAAATGAAGAAATCC
TACAGCATAAAGCACATTGCTGAGCCAGAGTCAAAAGAACTCTTCTTG
Protein sequence predicted based on nucleotide sequence
MEAPEYLDLDEIDFSDDISDNRSQGNRLQKLGLEDTDREDAMGFGSHRAKLTVVAALGAC HCPENEYSVTSLKTIPELCRRCDTQNEDRSVSSSSWNCGISTLITNTQKPTGIADVYSKF RPVKRVSPLKHQPETLENNESDDQKNQKVVEYQKGGESDLGPQPQELGPGDGVGGPPGKS SEPSTSLGELEHYDLDMDEILDVPYIKSSQQLASFTKVTSEKRILGLCTTINGLFGKACS TGSSESSSSNMAPFCVLSPVKSPHLRKASAVIHDQHKLSTEETEISPPLVKCGSAYEPEN QSKDFLNKTFSDPHGRKVEKTTPDCQLRAFHLQSSAAESKPEEQVSGLNRTSSQGPEERS EYLKKVKSILNIVKEGQISLLPHLAADNLDKIHDENGNNLLHIAASQGHAECLQHLTSLM GEDCLNERNTEKLTPAGLAIKNGQLECVRWMVSETEAIAELSCSKDFPSLIHYAGCYGQE KILLWLLQFMQEQGISLDEVDQDGNSAVHVASQHGYLGCIQTLVEYGANVTMQNHAGEKP SQSAERQGHTLCSRYLVVVETCMSLASQVVKLTKQLKEQTVERVTLQNQLQQFLEAQKSE GKSLPSSPSSPSSPASRKSQWKSPDADDDSVAKSKPGVQEGIQVLGSLSASSRARPKAKD GDSDKILRQLLGKEISENVCTQEKLSLEFQDAQASSRNSKKIPLEKRELKLARLRQLMQR SLSESDTDSNNSEDPKTTPVRKGDRPRPQPIVESVESMDSAESLHLMIKKHTLASGGRRF PFSIKASKSLDGHSPSPTSESSEPDLESQYPGSGSIPPNQPSGDPQQPSPDSTAAQKVAT SPKSALKSPSSKRRTSQNLKLRVTFEEPVVQMEQPSLELNGEKDKDKGRTLQRTSTSNES GDQLKRPFGAFRSIMETLSGNQNNNNNYQAANQLKTSTLPLTSLGRKTDAKGNPASSASK GKNKAEMYSSCINLSSNMLIEEHLCNDTRHNDINRKMKKSYSIKHIAEPESKELFL
Coding Sequence Details
Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None
Recommended Growth Condition:
Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:
bacterial
Marker:
ampicillin
Bacterial Selection Condition:
100 ug/mL ampicillin
Growth Condition:
Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:
Commonly used conditions for ampicillin resistant plasmid clones.
Protein Expression Results:
None
Recommended expression in:
Not Applicable
Vector Name:
pANT7_cGST
Synonyms:
pANT7-cGST
Description:
with tag/fusion/marker assay, Gateway and reg, acceptor (destination), recombinational cloning clone, in vitro transcription expression with attR1 and NAP150 and ccdB and attR2 and GST and CmR and T7 and NAP138 and ColE and AmpR ampicillin resistance in bacterial
Comments:
One in a series of pANT7 vectors made by A. Lau and N. Ramachandran for use with NAPPA arrays. Can be used for cell free expression of the gene insert using human IVTT from Thermo Fisher or rabbit reticulocyte systems
Size (bp):
5964
Parent Vector:
None
Properties:
Gateway, acceptor (destination), in vitro transcription, recombinational cloning, with tag/fusion/marker
Author Name:
Joshua LaBaer
Al Lau
Niroshan Ramachandran
Al Lau
Niroshan Ramachandran
Publications:
PMID:
15232106
Title: Self-assembling protein microarrays
Vector Map:
Vector Sequence:
Sequence:
Vector Features:
Type
Name
Description
Start
End
bacterial origin
ColE
ColE1 bacterial origin of replication
3931
3249
death cassette
ccdB
ccdB death cassette present in 'empty vector' form only (replace with gene of interest)
1876
2085
primer
NAP138
NAP138 reverse sequencing primer 5? TGTTTCGCCATTTATCACCTTC 3?
2405
2384
primer
NAP150
Forward sequencing primer NAP150 5?-CCC ATT GTA TGG GAT CTG ATC-3?
388
408
promoter
T7
T7 transcriptional start sequence
5940
5964
recombination site
attR1
AttR1 site for recombination in empty vector
549
565
recombination site
attR2
AttR2 site for recombination in empty vector
2236
2251
selectable marker
CmR
chloramphenicol resistance
782
1438
selectable marker
AmpR
ampicillin resistance gene
4688
4029
tag
GST
Glutathione transferase (GST) tag
2282
2950
