Gene:
Gene Symbol:
Gene Name:
Original Clone ID:
None
Keyword:
Codon optimized
Species:
Homo sapiens
Type:
cDNA
Vector Name:
pDONR221
Format:
FUSION
Source:
None
Description:
None
Comments:
Gene synthesis by Gen9. Codon optimized
Mutation / Discrepancy:
Yes / No
Publications:
None
Authors:
Center for Personalized Diagnostics
HsCD00746299
Price:
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AVAILABLE
No restriction
Special MTA: None
Special MTA: None
Insert sequence: 3630nts
Open reading frame: 1 to 3630
ATGGCATCACAGCTGCAAGTGTTTTCGCCCCCATCAGTGTCGTCGAGTGCCTTCTGCAGT
GCGAAGAAACTGAAAATAGAGCCCTCTGGCTGGGATGTTTCAGGACAGAGTAGCAACGAC
AAATATTATACCCACAGCAAAACCCTGCCAGCCACACAAGGGCAAGCCAACTCCTCTCAC
CAGGTAGCAAATTTCAACATCCCTGCTTACGACCAGGGCCTCCTCCTCCCAGCTCCTGCA
GTGGAGCATATCGTTGTAACAGCCGCTGATAGCTCCGGCAGTGCTGCTACATCAACCTTC
CAAAGCAGCCAGACACTGACTCACAGAAGCAACGTTTCTCTGCTTGAGCCATATCAAAAA
TGTGGATTGAAACGAAAAAGTGAGGAAGTTGACAGCAACGGTAGTGTGCAGATCATAGAA
GAACATCCCCCTCTCATGCTCCAAAACAGGACTGTGGTGGGTGCTGCTGCCACAACCACC
ACTGTGACCACAAAGAGCAGCAGTTCCAGCGGAGAAGGGGATTACCAGCTCGTCCAGCAT
GAGATCCTTTGCTCTATGACCAATAGCTATGAAGTCTTGGAGTTCCTAGGACGGGGGACA
TTTGGACAGGTGGCTAAGTGCTGGAAGAGGAGCACCAAGGAAATTGTGGCCATTAAAATC
TTGAAGAACCACCCCTCCTATGCCAGACAAGGACAGATTGAAGTGAGCATCCTTTCCCGC
CTAAGTAGTGAAAATGCTGATGAGTATAATTTTGTGCGGTCATACGAGTGCTTTCAGCAT
AAGAATCATACCTGCCTTGTTTTTGAAATGTTAGAGCAGAACTTATATGATTTTCTAAAG
CAAAACAAATTTAGCCCACTGCCACTCAAGTACATCAGACCAATCTTGCAACAGGTGGCC
ACAGCCTTGATGAAGCTGAAGAGTCTTGGTCTGATCCACGCTGACCTTAAGCCTGAAAAC
ATCATGCTGGTTGATCCAGTTCGTCAGCCCTACCGAGTGAAGGTCATTGACTTTGGTTCT
GCTAGTCACGTTTCCAAAGCTGTCTGCTCAACCTACTTACAGTCACGTTACTACAGAGCT
CCTGAAATTATTCTTGGGTTGCCATTTTGTGAAGCTATTGATATGTGGTCACTGGGCTGT
GTGATAGCTGAGCTGTTCCTGGGATGGCCTCTTTATCCTGGTGCTTCAGAATATGATCAG
ATTCGTTATATTTCACAAACACAAGGCCTGCCAGCTGAATATCTTCTCAGCGCCGGAACA
AAAACAACAAGGTTTTTCAACAGAGATCCTAATTTGGGGTACCCACTGTGGAGGCTTAAG
ACACCTGAAGAACATGAACTGGAGACTGGAATAAAATCAAAAGAAGCTAGGAAGTACATT
TTTAATTGCTTAGATGACATGGCTCAGGTGAATATGTCTACAGACCTCGAGGGAACAGAC
ATGTTGGCAGAGAAGGCAGACCGAAGAGAATACATTGATCTGTTAAAGAAAATGCTCACA
ATTGATGCAGATAAGAGAATTACCCCTCTAAAAACTCTTAACCATCAGTTTGTGACAATG
ACTCACCTTTTGGATTTTCCACATAGCAATCATGTTAAGTCTTGTTTTCAGAACATGGAG
ATCTGCAAGAGGAGGGTTCACATGTATGATACAGTGAGTCAGATTAAGAGTCCCTTCACT
ACACATGTTGCCCCAAATACAAGCACAAATCTAACCATGAGCTTCAGCAATCAGCTCAAT
ACAGTGCACAATCAGGCCAGTGTTCTGGCTTCCAGTTCTACTGCAGCAGCTGCTACTCTT
TCCCTGGCTAATTCAGATGTCTCACTACTAAACTACCAGTCCGCTTTATACCCATCATCT
GCTGCCCCAGTTCCTGGAGTTGCCCAGCAGGGTGTTTCCTTGCAGCCTGGAACCACCCAG
ATTTGCACTCAGACAGATCCATTCCAACAGACATTTATAGTATGTCCCCCTGCGTTTCAA
ACCGGACTACAAGCAACAACAAAGCATTCTGGATTCCCTGTGAGGATGGATAATGCTGTA
CCGATTGTACCCCAGGCACCAGCTGCTCAGCCACTGCAGATTCAGTCAGGAGTTCTCACG
CAGGGAAGCTGTACACCACTAATGGTAGCAACTCTCCACCCTCAAGTAGCCACCATCACA
CCGCAGTATGCGGTGCCCTTTACTCTGAGTTGCGCAGCCGGCCGGCCGGCGCTGGTTGAA
CAGACTGCAGCTGTACTGCAGGCGTGGCCTGGAGGGACTCAGCAAATTCTCTTGCCTTCA
ACTTGGCAACAGTTGCCTGGGGTAGCTCTACACAACTCTGTCCAGCCCACAGCAATGATT
CCAGAGGCCATGGGGAGTGGACAGCAGCTAGCTGACTGGAGGAATGCCCACTCTCATGGC
AACCAGTACAGCACTATCATGCAGCAGCCATCCTTGCTGACTAACCATGTCACATTGGCC
ACTGCCCAGCCTCTGAATGTTGGTGTTGCTCATGTTGTCAGACAACAACAATCCAGTTCC
CTCCCTTCGAAGAAGAATAAGCAGTCAGCTCCAGTCTCTTCCAAGTCCTCTCTAGATGTT
CTCCCTTCCCAAGTCTATTCTCTGGTTGGGAGCAGTCCCCTCCGCACCACATCCTCTTAT
AATTCCTTGGTCCCTGTCCAAGATCAGCATCAGCCTATCATCATTCCAGATACTCCCAGC
CCTCCTGTGAGTGTGATCACTATCCGAAGTGACACTGATGAGGAAGAGGACAACAAATAC
AAGCCTAGTAGCTCTGGACTGAAGCCAAGGTCTAATGTCATCAGTTATGTCACTGTCAAT
GATTCTCCAGACTCTGACTCTTCTCTGAGCAGTCCATATTCCACTGATACCCTGAGTGCT
CTCCGAGGCAATAGTGGATCCGTTTTGGAGGGGCCTGGCAGAGTTGTGGCAGATGGCACT
GGCACCCGCACTATCATTGTGCCTCCACTGAAAACTCAGCTTGGTGACTGCACTGTAGCA
ACCCAGGCCTCAGGTCTGCTGAGCAATAAGACTAAGCCAGTCGCTTCAGTGAGTGGGCAG
TCATCTGGGTGCTGTATCACCCCCACAGGGTATCGAGCTCAACGCGGGGGCACCAGTGCA
GCACAACCACTCAATCTTAGCCAGAACCAGCAGTCATCGGCGGCTCCAACCTCACAGGAG
AGAAGCAGCAACCCAGCCCCCCGCAGGCAGCAGGCGTTTGTGGCCCCTCTCTCCCAAGCC
CCCTACACCTTCCAGCATGGCAGCCCGCTACACTCGACAGGGCACCCACACCTTGCCCCG
GCCCCTGCCCACCTCCCAAGCCAGGCTCATCTGTATACGTATGCTGCCCCGACTTCTGCT
GCTGCACTGGGCTCAACCAGCTCTATTGCTCATCTTTTCTCCCCACAGGGTTCCTCAAGG
CATGCTGCAGCCTATACCACTCACCCTAGCACTTTGGTGCACCAGGTCCCTGTCAGTGTT
GGGCCCAGCCTCCTCACTTCCGCCAGTGTGGCCCCTGCTCAGTACCAACACCAGTTTGCC
ACCCAATCCTACATTGGGTCTTCCCGAGGCTCAACAATTTACACTGGATACCCGCTGAGT
CCTACCAAGATCAGCCAGTATTCCTACTTA
Protein sequence predicted based on nucleotide sequence
MASQLQVFSPPSVSSSAFCSAKKLKIEPSGWDVSGQSSNDKYYTHSKTLPATQGQANSSH QVANFNIPAYDQGLLLPAPAVEHIVVTAADSSGSAATSTFQSSQTLTHRSNVSLLEPYQK CGLKRKSEEVDSNGSVQIIEEHPPLMLQNRTVVGAAATTTTVTTKSSSSSGEGDYQLVQH EILCSMTNSYEVLEFLGRGTFGQVAKCWKRSTKEIVAIKILKNHPSYARQGQIEVSILSR LSSENADEYNFVRSYECFQHKNHTCLVFEMLEQNLYDFLKQNKFSPLPLKYIRPILQQVA TALMKLKSLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCSTYLQSRYYRA PEIILGLPFCEAIDMWSLGCVIAELFLGWPLYPGASEYDQIRYISQTQGLPAEYLLSAGT KTTRFFNRDPNLGYPLWRLKTPEEHELETGIKSKEARKYIFNCLDDMAQVNMSTDLEGTD MLAEKADRREYIDLLKKMLTIDADKRITPLKTLNHQFVTMTHLLDFPHSNHVKSCFQNME ICKRRVHMYDTVSQIKSPFTTHVAPNTSTNLTMSFSNQLNTVHNQASVLASSSTAAAATL SLANSDVSLLNYQSALYPSSAAPVPGVAQQGVSLQPGTTQICTQTDPFQQTFIVCPPAFQ TGLQATTKHSGFPVRMDNAVPIVPQAPAAQPLQIQSGVLTQGSCTPLMVATLHPQVATIT PQYAVPFTLSCAAGRPALVEQTAAVLQAWPGGTQQILLPSTWQQLPGVALHNSVQPTAMI PEAMGSGQQLADWRNAHSHGNQYSTIMQQPSLLTNHVTLATAQPLNVGVAHVVRQQQSSS LPSKKNKQSAPVSSKSSLDVLPSQVYSLVGSSPLRTTSSYNSLVPVQDQHQPIIIPDTPS PPVSVITIRSDTDEEEDNKYKPSSSGLKPRSNVISYVTVNDSPDSDSSLSSPYSTDTLSA LRGNSGSVLEGPGRVVADGTGTRTIIVPPLKTQLGDCTVATQASGLLSNKTKPVASVSGQ SSGCCITPTGYRAQRGGTSAAQPLNLSQNQQSSAAPTSQERSSNPAPRRQQAFVAPLSQA PYTFQHGSPLHSTGHPHLAPAPAHLPSQAHLYTYAAPTSAAALGSTSSIAHLFSPQGSSR HAAAYTTHPSTLVHQVPVSVGPSLLTSASVAPAQYQHQFATQSYIGSSRGSTIYTGYPLS PTKISQYSYL
Coding Sequence Details
Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None
Recommended Growth Condition:
Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:
bacterial
Marker:
kanamycin
Bacterial Selection Condition:
50ug/mL kanamycin
Growth Condition:
Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:
Conditions for Gateway-type vectors in recombined (with insert) form and other kanamycin resistant vectors.
Protein Expression Results:
None
Recommended expression in:
Not Applicable
Vector Name:
pDONR221
Synonyms:
''
Description:
Gateway®, donor (entry), recombinational cloning clone, bacterial expression expression with rrnB T2 and rrnB T1 and M13 forward and attP1 and ccdB and CmR and cat_promoter-var002 and attP2 and T7 promoter and M13 reverse and KanR and ori; 50ug/mL of Kanamycin resistance in Pichia;
Comments:
The position of features were determined for the unrecombined (empty) form of the vector, which is described in detail on the Invitrogen website.
Size (bp):
4762
Parent Vector:
None
Properties:
Gateway, bacterial expression, donor (entry), recombinational cloning
Author Name:
Invitrogen
Publications:
None
Vector Map:
Vector Sequence:
Sequence:
Vector Features:
Type
Name
Description
Start
End
CDS
ccdB
CcdB, a bacterial toxin that poisons DNA gyrase
1197
1502
CDS
CmR
confers resistance to chloramphenicol
1847
2506
CDS
KanR
confers resistance to kanamycin in bacteria or G418 (Geneticin) in eukaryotes
3156
3965
Terminator
rrnB T2
transcription terminator T2 from the E. coli rrnB gene
268
295
Terminator
rrnB T1
transcription terminator T1 from the E. coli rrnB gene
387
473
primer_bind
M13 forward
common sequencing primer, one of multiple similar variants
537
553
primer_bind
M13 reverse
common sequencing primer, one of multiple similar variants
3027
3043
promoter
cat_promoter-var002
promoter of the E. coli cat gene encoding chloramphenicol acetyltransferase
2507
2609
promoter
T7 promoter
promoter for bacteriophage T7 RNA polymerase
3004
3022
protein binding site
attP1
recombination site for the Gateway BP reaction
570
801
protein binding site
attP2
recombination site for the Gateway BP reaction
2754
2985
rep_origin
ori
high-copy-number ColE1/pMB1/pBR322/pUC origin of replication
4112
4700
