Gene:
Gene Symbol:
Gene Name:
Original Clone ID:
None
Keyword:
Codon optimized
Species:
Homo sapiens
Type:
cDNA
Vector Name:
pDONR221
Format:
FUSION
Source:
None
Description:
None
Comments:
Gene synthesis by Gen9. Codon optimized
Mutation / Discrepancy:
Yes / No
Publications:
None
Authors:
Center for Personalized Diagnostics
HsCD00746370
Price:
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AVAILABLE
No restriction
Special MTA: None
Special MTA: None
Insert sequence: 5286nts
Open reading frame: 1 to 5286
ATGGAATGCTGCCGTCGGGCAACTCCAGGCACACTTCTCCTCTTTCTGGCTTTCCTGCTC
CTGAGTTCCAGGACCGCAAGATCGGAAGAGGACCGGGACGGCCTGTGGGATGCCTGGGGC
CCATGGAGTGAATGCTCACGCACCTGTGGGGGTGGGGCCTCCTACTCCCTGAGGCGTTGC
CTGAGCAGTAAGAGCTGTGAAGGAAGAAACATCCGATACAGAACATGCAGTAATGTGGAC
TGCCCACCAGAAGCAGGCGATTTCCGAGCTCAGCAATGCTCAGCTCATAATGATGTCAAG
CACCACGGCCAGTTTTATGAATGGCTTCCTGTGTCCAATGACCCTGACAACCCATGTTCA
CTTAAGTGCCAAGCCAAAGGCACAACACTGGTTGTTGAACTAGCACCAAAGGTCTTAGAT
GGTACGCGTTGCTATACCGAGTCTTTGGATATGTGCATCAGTGGTTTATGCCAAATTGTT
GGATGCGATCACCAGCTGGGAAGCACCGTCAAGGAAGATAACTGTGGGGTCTGCAACGGA
GATGGGTCCACATGCCGGCTGGTGCGAGGGCAGTATAAATCCCAGCTCTCCGCAACCAAA
TCGGATGATACCGTGGTTGCAATTCCTTATGGAAGTAGGCATATACGCCTAGTCTTGAAA
GGTCCTGATCACTTATATCTGGAAACCAAAACACTGCAGGGGACTAAAGGTGAAAACTCC
CTCAGCTCAACAGGAACTTTCCTTGTGGACAATTCATCTGTCGACTTCCAGAAATTTCCA
GATAAAGAGATCCTGAGAATGGCTGGACCTCTCACAGCAGATTTCATTGTTAAGATTCGT
AACTCGGGCTCCGCAGACAGTACAGTTCAGTTCATCTTCTATCAACCTATCATCCACCGA
TGGAGGGAGACGGATTTCTTTCCTTGTTCAGCAACCTGTGGAGGAGGTTATCAGCTGACC
TCGGCTGAGTGCTACGATCTGAGGAGTAACCGTGTGGTTGCTGACCAATACTGTCACTAT
TACCCCGAGAACATCAAACCCAAACCTAAGCTTCAGGAGTGCAACTTGGACCCTTGTCCA
GCTAGTGACGGATACAAGCAGATTATGCCTTATGACCTCTACCATCCCCTTCCTCGGTGG
GAAGCCACCCCATGGACCGCGTGCTCGTCCTCGTGTGGGGGCGGAATTCAGAGCCGGGCA
GTTTCCTGTGTGGAGGAGGACATCCAGGGGCATGTCACTTCAGTAGAAGAGTGGAAATGT
ATGTATACCCCTAAGATGCCCATCGCGCAGCCCTGCAACATTTTTGACTGCCCCAAATGG
CTGGCACAAGAGTGGTCCCCGTGCACAGTGACCTGTGGCCAGGGCCTCAGATACCGTGTG
GTGCTCTGCATCGACCATCGAGGCATGCACACCGGAGGCTGTAGCCCAAAAACAAAGCCA
CACATAAAAGAGGAATGCATCGTACCCACCCCCTGCTATAAACCCAAAGAGAAACTTCCA
GTCGAGGCCAAGTTACCATGGTTCAAACAAGCTCAAGAGCTGGAAGAAGGAGCCGCTGTG
TCAGAGGAGCCCTCGTTCATCCCAGAGGCCTGGTCGGCCTGCACAGTAACCTGTGGAGTG
GGCACCCAGGTGCGAATAGTCAGGTGCCAGGTGCTGCTGTCTTTCTCTCAGTCCGTGGCT
GACCTGCCTATTGACGAGTGTGAAGGGCCCAAGCCAGCATCCCAGCGTGCCTGTTATGCA
GGCCCATGCAGCGGGGAAATTCCCGAGTTCAACCCCGACGAGACAGATGGCCTCTTTGGT
GGCCTCCAGGATTTCGACGAGCTGTATGACTGGGAGTATGAGGGGTTCACTAAGTGCTCC
GAGTCCTGTGGAGGCGGTGTCCAGGAGGCCGTTGTGAGCTGCTTGAACAAACAGACCCGC
GAGCCTGCTGAGGAGAACCTGTGCGTGACCAGCCGCCGGCCCCCACAGCTACTGAAGTCT
TGCAATTTGGATCCCTGCCCAGCCAGGTGGGAAATCGGCAAGTGGAGTCCATGTAGTCTC
ACATGTGGGGTGGGCCTCCAGACCAGAGACGTCTTCTGCAGCCATCTGCTGTCCAGAGAG
ATGAATGAAACCGTCATCCTCGCTGATGAGCTGTGTCGCCAGCCTAAGCCCAGTACAGTT
CAAGCTTGTAACCGGTTTAATTGCCCCCCAGCCTGGTACCCCGCACAGTGGCAGCCGTGT
TCCAGAACGTGTGGTGGGGGTGTTCAAAAACGTGAGGTTCTTTGCAAGCAGCGGATGGCT
GATGGCTCCTTCCTGGAGCTGCCTGAGACATTCTGTTCAGCTTCAAAACCTGCCTGCCAG
CAAGCCTGCAAGAAAGATGACTGTCCCAGCGAATGGCTTCTCTCAGACTGGACAGAGTGT
TCCACATCCTGCGGGGAAGGCACCCAGACTCGAAGCGCCATTTGCCGAAAGATGCTGAAA
ACCGGGCTCTCAACGGTTGTCAATTCCACCCTTTGCCCGCCCCTGCCTTTCTCCTCCTCC
ATCAGGCCCTGTATGCTGGCAACGTGTGCAAGGCCCGGGCGGCCATCTACAAAGCATAGC
CCGCACATCGCGGCCGCCAGGAAGGTCTACATACAGACTCGGAGGCAGAGGAAGCTCCAT
TTCGTCGTTGGGGGTTTTGCCTACCTGCTTCCCAAGACCGCGGTGGTGCTGCGCTGTCCG
GCCCGCAGGGTGCGCAAGCCCCTCATCACCTGGGAGAAGGACGGGCAGCACCTTATCAGC
TCGACGCACGTCACAGTGGCCCCCTTCGGCTATCTCAAGATCCACCGCCTCAAGCCCTCG
GATGCAGGCGTGTACACCTGTTCTGCCGGACCGGCCCGGGAGCACTTTGTCATCAAGCTC
ATCGGAGGCAACCGCAAGCTCGTGGCCCGGCCATTGTCACCGAGGAGTGAGGAAGAGGTG
CTTGCGGGTAGGAAGGGCGGCCCGAAGGAGGCCCTGCAGACCCACAAACACCAGAACGGG
ATTTTCTCCAACGGCAGCAAGGCCGAGAAGCGGGGCTTAGCCGCCAACCCGGGGAGCCGC
TATGACGACCTCGTTTCCAGGCTGCTAGAGCAGGGCGGCTGGCCTGGAGAGCTTCTCGCC
TCGTGGGAGGCGCAGGACTCTGCGGAAAGAAACACAACCTCCGAGGAGGACCCGGGTGCA
GAGCAAGTGCTCCTGCACCTACCCTTCACCATGGTGACCGAGCAGCGGCGCCTGGACGAC
ATCCTGGGAAACCTGTCCCAGCAGCCCGAAGAGCTGCGCGACCTGTACAGCAAGCACCTG
GTGGCCCAGCTCGCCCAGGAGATTTTCCGCAGCCACCTTGAGCACCAGGACACGCTCCTG
AAGCCCTCGGAGCGCCGGACTTCCCCAGTGACACTCTCGCCCCATAAACATGTGTCTGGG
TTCAGCAGTTCCCTGCGGACCTCCTCTACCGGGGACGCCGGCGGAGGATCTCGGAGGCCA
CACCGCAAGCCTACCATCCTGCGCAAGATCTCAGCGGCCCAGCAGCTCTCAGCCTCGGAG
GTGGTTACCCACCTGGGGCAGACGGTCGCCCTGGCCAGCGGGACACTCAGTGTTCTGCTG
CACTGTGAGGCCATCGGCCACCCAAGACCTACCATCAGCTGGGCTAGGAATGGAGAAGAA
GTTCAGTTCAGTGACAGGATTCTGCTACAGCCAGATGATTCCTTACAGATCTTGGCCCCC
GTGGAAGCAGATGTTGGTTTTTACACTTGTAATGCCACCAATGCCCTGGGATACGACTCT
GTCTCCATTGCCGTCACATTAGCAGGAAAGCCACTAGTGAAAACGTCACGAATGACAGTT
ATTAACACCGAGAAGCCTGCAGTCACAGTGGATATAGGAAGCACCATCAAAACAGTGCAG
GGAGTGAATGTGACAATTAACTGCCAGGTTGCCGGCGTGCCTGAAGCTGAAGTCACTTGG
TTCAGGAATAAATCGAAACTGGGCTCCCCCCACCATCTGCACGAAGGGTCCTTACTGCTG
ACAAACGTCTCTTCCTCCGATCAGGGACTGTACTCATGCAGGGCGGCGAATCTTCATGGA
GAGCTTACTGAGAGCACCCAGCTGCTGATCCTAGATCCCCCCCAAGTGCCCACACAGTTG
GAAGACATCAGGGCCTTGCTCGCTGCCACTGGACCGAACCTGCCTTCAGTCCTGACCTCT
CCTCTGGGAACACAGCTCGTGCTGGACCCTGGGAATTCCGCTCTCCTTGGCTGCCCCATC
AAAGGCCACCCTGTCCCTAATATCACCTGGTTTCATGGCGGGCAGCCAATTGTCACTGCC
ACGGGACTGACGCATCACATCTTGGCAGCTGGACAGATCCTTCAAGTTGCTAACCTTAGC
GGTGGGTCGCAAGGGGAATTCAGCTGTCTTGCTCAGAATGAGGCAGGGGTGCTCATGCAG
AAGGCGTCTTTAGTGATCCAAGATTACTGGTGGTCTGTGGACAGACTGGCAACCTGCTCA
GCCTCTTGTGGTAACAGGGGCGTTCAACAGCCACGCTTGAGGTGCCTGCTGAACAGCACG
GAGGTGAACCCTGCCCACTGCGCAGGGAAGGTTCGACCTGCGGTGCAGCCCATCGCGTGC
AACCGACGCGACTGCCCTTCTAGGTGGATGGTGACCTCCTGGTCTGCCTGTACACGGAGC
TGTGGGGGCGGCGTCCAGACCCGCAGAGTGACCTGTCAAAAGCTGAAAGCCTCTGGGATC
TCCACCCCTGTTTCCAATGATATGTGCACCCAGGTCGCCAAGCGGCCTGTGGACACCCAG
GCCTGTAACCAGCAGCTGTGCGTGGAATGGGCCTTCTCCAGCTGGGGCCAGTGTAATGGG
CCTTGCATCGGCCCTCACCTCGCTGTGCAACACAGACAAGTCTTCTGTCAAACACGGGAT
GGCATCACCTTACCATCCGAGCAATGCAGTGCTCTTCCGAGGCCTGTGAGCACCCAGAAC
TGCTGGTCAGAGGCCTGCAGTGTACACTGGAGAGTCAGCCTGTGGACCCTGTGCACCGCT
ACATGCGGCAACTACGGCTTCCAGTCACGGCGTGTGGAGTGCGTGCATGCCCGCACCAAC
AAGGCAGTGCCCGAGCACCTTTGCTCCTGGGGCCCCCGGCCTGCCAACTGGCAGCGATGC
AACATCACCCCATGTGAAAACATGGAGTGCAGAGACACCACCAGGTATTGCGAGAAGGTG
AAACAGCTGAAACTCTGCCAACTCAGCCAGTTCAAATCTCGCTGCTGTGGAACCTGTGGC
AAGGCG
Protein sequence predicted based on nucleotide sequence
MECCRRATPGTLLLFLAFLLLSSRTARSEEDRDGLWDAWGPWSECSRTCGGGASYSLRRC LSSKSCEGRNIRYRTCSNVDCPPEAGDFRAQQCSAHNDVKHHGQFYEWLPVSNDPDNPCS LKCQAKGTTLVVELAPKVLDGTRCYTESLDMCISGLCQIVGCDHQLGSTVKEDNCGVCNG DGSTCRLVRGQYKSQLSATKSDDTVVAIPYGSRHIRLVLKGPDHLYLETKTLQGTKGENS LSSTGTFLVDNSSVDFQKFPDKEILRMAGPLTADFIVKIRNSGSADSTVQFIFYQPIIHR WRETDFFPCSATCGGGYQLTSAECYDLRSNRVVADQYCHYYPENIKPKPKLQECNLDPCP ASDGYKQIMPYDLYHPLPRWEATPWTACSSSCGGGIQSRAVSCVEEDIQGHVTSVEEWKC MYTPKMPIAQPCNIFDCPKWLAQEWSPCTVTCGQGLRYRVVLCIDHRGMHTGGCSPKTKP HIKEECIVPTPCYKPKEKLPVEAKLPWFKQAQELEEGAAVSEEPSFIPEAWSACTVTCGV GTQVRIVRCQVLLSFSQSVADLPIDECEGPKPASQRACYAGPCSGEIPEFNPDETDGLFG GLQDFDELYDWEYEGFTKCSESCGGGVQEAVVSCLNKQTREPAEENLCVTSRRPPQLLKS CNLDPCPARWEIGKWSPCSLTCGVGLQTRDVFCSHLLSREMNETVILADELCRQPKPSTV QACNRFNCPPAWYPAQWQPCSRTCGGGVQKREVLCKQRMADGSFLELPETFCSASKPACQ QACKKDDCPSEWLLSDWTECSTSCGEGTQTRSAICRKMLKTGLSTVVNSTLCPPLPFSSS IRPCMLATCARPGRPSTKHSPHIAAARKVYIQTRRQRKLHFVVGGFAYLLPKTAVVLRCP ARRVRKPLITWEKDGQHLISSTHVTVAPFGYLKIHRLKPSDAGVYTCSAGPAREHFVIKL IGGNRKLVARPLSPRSEEEVLAGRKGGPKEALQTHKHQNGIFSNGSKAEKRGLAANPGSR YDDLVSRLLEQGGWPGELLASWEAQDSAERNTTSEEDPGAEQVLLHLPFTMVTEQRRLDD ILGNLSQQPEELRDLYSKHLVAQLAQEIFRSHLEHQDTLLKPSERRTSPVTLSPHKHVSG FSSSLRTSSTGDAGGGSRRPHRKPTILRKISAAQQLSASEVVTHLGQTVALASGTLSVLL HCEAIGHPRPTISWARNGEEVQFSDRILLQPDDSLQILAPVEADVGFYTCNATNALGYDS VSIAVTLAGKPLVKTSRMTVINTEKPAVTVDIGSTIKTVQGVNVTINCQVAGVPEAEVTW FRNKSKLGSPHHLHEGSLLLTNVSSSDQGLYSCRAANLHGELTESTQLLILDPPQVPTQL EDIRALLAATGPNLPSVLTSPLGTQLVLDPGNSALLGCPIKGHPVPNITWFHGGQPIVTA TGLTHHILAAGQILQVANLSGGSQGEFSCLAQNEAGVLMQKASLVIQDYWWSVDRLATCS ASCGNRGVQQPRLRCLLNSTEVNPAHCAGKVRPAVQPIACNRRDCPSRWMVTSWSACTRS CGGGVQTRRVTCQKLKASGISTPVSNDMCTQVAKRPVDTQACNQQLCVEWAFSSWGQCNG PCIGPHLAVQHRQVFCQTRDGITLPSEQCSALPRPVSTQNCWSEACSVHWRVSLWTLCTA TCGNYGFQSRRVECVHARTNKAVPEHLCSWGPRPANWQRCNITPCENMECRDTTRYCEKV KQLKLCQLSQFKSRCCGTCGKA
Coding Sequence Details
Insert Sequence Verified?:
Y
Verification Method:
NGS Verification
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None
Recommended Growth Condition:
Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:
bacterial
Marker:
kanamycin
Bacterial Selection Condition:
50ug/mL kanamycin
Growth Condition:
Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:
Conditions for Gateway-type vectors in recombined (with insert) form and other kanamycin resistant vectors.
Protein Expression Results:
None
Recommended expression in:
Not Applicable
Vector Name:
pDONR221
Synonyms:
''
Description:
Gateway®, donor (entry), recombinational cloning clone, bacterial expression expression with rrnB T2 and rrnB T1 and M13 forward and attP1 and ccdB and CmR and cat_promoter-var002 and attP2 and T7 promoter and M13 reverse and KanR and ori; 50ug/mL of Kanamycin resistance in Pichia;
Comments:
The position of features were determined for the unrecombined (empty) form of the vector, which is described in detail on the Invitrogen website.
Size (bp):
4762
Parent Vector:
None
Properties:
Gateway, bacterial expression, donor (entry), recombinational cloning
Author Name:
Invitrogen
Publications:
None
Vector Map:
Vector Sequence:
Sequence:
Vector Features:
Type
Name
Description
Start
End
CDS
ccdB
CcdB, a bacterial toxin that poisons DNA gyrase
1197
1502
CDS
CmR
confers resistance to chloramphenicol
1847
2506
CDS
KanR
confers resistance to kanamycin in bacteria or G418 (Geneticin) in eukaryotes
3156
3965
Terminator
rrnB T2
transcription terminator T2 from the E. coli rrnB gene
268
295
Terminator
rrnB T1
transcription terminator T1 from the E. coli rrnB gene
387
473
primer_bind
M13 forward
common sequencing primer, one of multiple similar variants
537
553
primer_bind
M13 reverse
common sequencing primer, one of multiple similar variants
3027
3043
promoter
cat_promoter-var002
promoter of the E. coli cat gene encoding chloramphenicol acetyltransferase
2507
2609
promoter
T7 promoter
promoter for bacteriophage T7 RNA polymerase
3004
3022
protein binding site
attP1
recombination site for the Gateway BP reaction
570
801
protein binding site
attP2
recombination site for the Gateway BP reaction
2754
2985
rep_origin
ori
high-copy-number ColE1/pMB1/pBR322/pUC origin of replication
4112
4700
