Gene:
Gene Symbol:
Gene Name:
Original Clone ID:
None
Keyword:
Full length: Yes; NT position: 1--4125; aa position: 1-1375; copied from sequenceID: 507138
Species:
Human alphaherpesvirus 1
Type:
cDNA
Vector Name:
pDONR221
Format:
FUSION
Source:
CPD
Description:
None
Comments:
None
Mutation / Discrepancy:
No / No
Publications:
None
Authors:
Center for Personalized Diagnostics
HaCD00816268
Price:
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AVAILABLE
No restriction
Special MTA: None
Special MTA: None
Insert sequence: 4122nts
Open reading frame: 1 to 4122
ATGGCCGCTCCCAACCGCGACCCTCCGGGATACCGGTATGCCGCGGCCATGGTGCCGACC
GGGTCCCTCCTTAGCACGATCGAGGTGGCGTCGCATCGACGCCTGTTTGATTTTTTTTCC
CGCGTGCGCTCCGATGCAAACAGCCTGTACGACGTCGAGTTCGACGCCCTGCTGGGGTCG
TATTGCAACACCCTGTCGCTCGTGCGCTTTCTGGAGCTCGGGTTGTCGGTGGCGTGCGTG
TGTACCAAGTTTCCGGAGCTGGCCTACATGAACGAGGGGCGCGTACAGTTCGAGGTCCAC
CAGCCGCTGATTGCCCGCGACGGCCCGCACCCCATCGAGCAACCCACACACAATTACATG
ACCAAGATTATCGACCGCCGGGCCCTGAACGCCGCCTTCAGCCTGGCCACCGAGGCCATC
GCCCTGCTCACGGGGGAGGCCCTGGACGGGACGGGTATCGGCGCGCATCGCCAGTTGCGC
GCCATCCAACAGCTCGCTCGCAACGTCCAGGCCGTCCTCGGGGCGTTTGAGCGCGGCACG
GCCGACCAGATGCTGCACGTGCTGCTGGAAAAGGCGCCGCCCCTGGCTTTGTTGTTGCCG
ATGCAACGATACCTGGACAACGGCCGCCTGGCCACCAGGGTGGCCCGGGCGACCCTGGTC
GCCGAGCTAAAGCGAAGCTTCTGCGAGACGAGCTTTTTCCTGGGCAAGGCGGGCCACCGC
CGGGAGGCCGTCGAGGCCTGGCTCGTGGACCTCACCACGGCCACGCAGCCCTCCGTGGCC
GTGCCCCGTCTGACGCATGCCGACACGCGCGGGCGGCCGGTCGACGGGGTGCTCGTCACC
ACCGCCCCGATCAAACAGCGCCTCCTGCAGTCCTTCCTGAAAGTGGAGGACACCGAAGCC
GACGTGCCGGTGACGTACGGCGAGATGGTCCTGAACGGGGCCAACCTGGTCACGGCGCTC
GTGATGGGCAAGGCCGTGCGAAGTCTGGACGACGTGGGCCGCCACCTGCTGGAGATGCAG
GAGGAGCAGCTCGACCTGAACCGGCAGACGCTGGACGAGCTCGAGAGCGCCCCCCAGACG
ACGCGCGTGCGCGCGGATCTGGTGTCCATCGGCGAGAAGCTGGTCTTTCTGGAGGCCCTG
GAGAAGCGCATCTACGCCGCCACCAACGTTCCCTACCCCCTGGTGGGCGCCATGGACCTG
ACGTTCGTCCTGCCCCTGGGCCTGTTCAATCCGGTCATGGAACGGTTTGCCGCGCACGCC
GGGGACCTAGTCCCCGCCCCCGGCCACCCGGATCCCCGCGCCTTCCCGCCCCGCCAGCTG
TTTTTTTGGGGGAAGGACCGCCAGGTGCTGCGCCTGTCTCTGGAACACGCGATCGGGACC
GTGTGCCACCCTTCGCTGATGAACGTTGACGCGGCGGTCGGGGGCCTTAACCGCGACCCC
GTCGAAGCCGCCAATCCGTACGGGGCGTACGTGGCGGCCCCGGCCGGCCCCGCCGCAGAC
ATGCAGCAGCTGTTTTTGAACGCCTGGGGGCAGCGCCTGGCCCACGGGCGGGTCCGATGG
GTCGCGGAAGGCCAGATGACCCCGGAGCAGTTTATGCAGCCCGACAACGCCAACCTGGCT
CTTGAGCTGCACCCCGCGTTCGACTTCTTTGTGGGGGTGGCCGACGTGGAGCTGCCGGGG
GGGGACGTTCCCCCGGCCGGCCCGGGGGAGATCCAGGCCACCTGGCGCGTGGTGAACGGC
AACTTGCCCCTGGCGCTATGTCCGGCGGCGTTCCGGGACGCCCGGGGCCTGGAGCTGGGG
GTGGGACGCCACGCCATGGCCCCCGCCACCATCGCCGCCGTTCGCGGGGCGTTCGACGAC
CGCAACTACCCGGCGGTGTTTTACCTGCTGCAGGCCGCCATACACGGCAGCGAGCACGTC
TTCTGCGCCCTGGCCCGGCTCGTGGTCCAGTGCATCACCAGCTACTGGAACAACACGCGG
TGCGCGGCGTTCGTGAACGACTACTCGCTGGTCTCGTACGTCGTGACCTACCTCGGGGGA
GACCTTCCCGAGGAGTGCATGGCCGTGTACCGGGACCTGGTGGCGCACGTCGAGGCCCTG
GCCCAGCTGGTTGATGACTTTACCCTGACCGGCCCGGAGCTGGGCGGGCAGGCGCAAGCC
GAGCTGAATCACCTAATGCGAGACCCGGCGCTGCTGCCACCCCTCGTGTGGGACTGTGAC
GCCCTGATGCGGCGCGCGGCCCTGGACCGCCATCGCGACTGCCGGGTTAGCGCGGGGGGC
CACGACCCCGTGTACGCGGCGGCATGTAACGTGGCGACCGCGGACTTCAACCGCAACGAC
GGCCAGCTGCTGCACAACACCCAGGCCCGAGCCGCGGACGCCGCGGATGACCGGCCGCAC
CGGGGGGCGGACTGGACCGTGCACCACAAGATTTACTACTACGTGATGGTGCCCGCCTTC
TCGCGGGGCCGCTGCTGCACCGCGGGGGTTCGCTTCGACCGCGTATACGCCACCCTGCAG
AACATGGTGGTCCCGGAGATCGCCCCCGGCGAGGAGTGCCCCAGCGACCCCGTGACGGAC
CCCGCGCACCCCCTGCACCCGGCCAATCTGGTGGCCAACACGGTCAACGCCATGTTTCAC
AACGGGCGCGTGGTAGTGGACGGGCCCGCCATGCTCACGCTGCAGGTGCTGGCCCACAAC
ATGGCCGAACGCACAACGGCGCTGCTCTGCTCGGCGGCGCCCGACGCGGGCGCCAACACC
GCGTCCACCACCAACATGCGCATATTCGACGGGGCGTTGCACGCCGGAATCCTGCTGATG
GCCCCCCAGCATCTGGACCATACCATCCAAAATGGCGACTATTTTTACCCCCTCCCCGTC
CACGCGCTGTTCGCCGGGGCCGACCACGTGGCGAACGCGCCCAATTTCCCCCCGGCCCTG
CGCGACCTGTCGCGGCAGGTCCCCCTGGTCCCCCCGGCTCTGGGGGCCAACTACTTTTCG
TCGATCCGACAGCCCGTCGTGCAGCACGTCCGCGAGAGCGCGGCCGGGGAGAACGCGCTG
ACCTACGCGCTCATGGCGGGGTACTTCAAGATCAGTCCCGTGGCCTTGCATCATCAGCTC
AAGACGGGCCTCCATCCCGGGTTTGGGTTCACCGTCGTCCGACAGGACCGCTTTGTGACT
GAGAACGTGCTGTTCTCGGAGCGCGCGTCGGAGGCGTACTTCCTGGGCCAGCTCCAGGTG
GCCCGGCACGAAACTGGCGGGGGGGTAAACTTCACGCTCACCCAGCCGCGCGCGAACGTG
GACCTGGGCGTGGGCTACACCGCCGTCGTGGCCACGGCAACCGTCCGCAACCCCGTCACC
GACATGGGCAACCTTCCCCAAAACTTTTACCTGGGCCGCGGGGCTCCCCCTCTCCTGGAC
AACGCGGCAGCCGTGTACCTGCGGAACGCGGTCGTGGCGGGAAACCGCCTGGGGCCGGCC
CAGCCCGTCCCCGTGTTCGGGTGCGCCCAGGTGCCGCGGCGCGCAGGGATGGACCACGGC
CAGGACGCCGTGTGTGAGTTTATCGCCACCCCCGTGTCGACCGACGTCAACTACTTCCGC
CGGCCCTGCAACCCCCGGGGACGCGCCGCCGGGGGCGTTTACGCGGGGGACAAGGAGGGG
GATGTCACCGCCCTCATGTACGACCACGGCCAGAGCGACCCGTCCCGGGCCTTCGCGGCC
ACGGCCAACCCGTGGGCGTCGCAGCGATTTTCGTACGGGGACCTGCTCTATAACGGGGCC
TACCACCTCAACGGGGCCTCGCCGGTGCTCAGCCCCTGCTTTAAGTTCTTTACGTCGGCC
GACATCGCCGCCAAACATCGCTGCCTGGAGCGCCTGATCGTGGAGACGGGTTCGGCGGTG
TCCACGGCCACCGCCGCCAGCGACGTACAGTTTAAGCGCCCCCCGGGGTGCCGCGAACTC
GTGGAGGACCCGTGTGGCCTGTTTCAGGAGGCCTACCCGCTCACCTGCGCCAGCGACCCC
GCCCTCCTCCGCAGTGCCCGCAACGGGGAAGCCCACGCGCGGGAGACCCACTTCGCGCAG
TATCTCGTCTATGACGCATCCCCGCTCAAGGGACTGGCTCTG
Protein sequence predicted based on nucleotide sequence
MAAPNRDPPGYRYAAAMVPTGSLLSTIEVASHRRLFDFFSRVRSDANSLYDVEFDALLGS YCNTLSLVRFLELGLSVACVCTKFPELAYMNEGRVQFEVHQPLIARDGPHPIEQPTHNYM TKIIDRRALNAAFSLATEAIALLTGEALDGTGIGAHRQLRAIQQLARNVQAVLGAFERGT ADQMLHVLLEKAPPLALLLPMQRYLDNGRLATRVARATLVAELKRSFCETSFFLGKAGHR REAVEAWLVDLTTATQPSVAVPRLTHADTRGRPVDGVLVTTAPIKQRLLQSFLKVEDTEA DVPVTYGEMVLNGANLVTALVMGKAVRSLDDVGRHLLEMQEEQLDLNRQTLDELESAPQT TRVRADLVSIGEKLVFLEALEKRIYAATNVPYPLVGAMDLTFVLPLGLFNPVMERFAAHA GDLVPAPGHPDPRAFPPRQLFFWGKDRQVLRLSLEHAIGTVCHPSLMNVDAAVGGLNRDP VEAANPYGAYVAAPAGPAADMQQLFLNAWGQRLAHGRVRWVAEGQMTPEQFMQPDNANLA LELHPAFDFFVGVADVELPGGDVPPAGPGEIQATWRVVNGNLPLALCPAAFRDARGLELG VGRHAMAPATIAAVRGAFDDRNYPAVFYLLQAAIHGSEHVFCALARLVVQCITSYWNNTR CAAFVNDYSLVSYVVTYLGGDLPEECMAVYRDLVAHVEALAQLVDDFTLTGPELGGQAQA ELNHLMRDPALLPPLVWDCDALMRRAALDRHRDCRVSAGGHDPVYAAACNVATADFNRND GQLLHNTQARAADAADDRPHRGADWTVHHKIYYYVMVPAFSRGRCCTAGVRFDRVYATLQ NMVVPEIAPGEECPSDPVTDPAHPLHPANLVANTVNAMFHNGRVVVDGPAMLTLQVLAHN MAERTTALLCSAAPDAGANTASTTNMRIFDGALHAGILLMAPQHLDHTIQNGDYFYPLPV HALFAGADHVANAPNFPPALRDLSRQVPLVPPALGANYFSSIRQPVVQHVRESAAGENAL TYALMAGYFKISPVALHHQLKTGLHPGFGFTVVRQDRFVTENVLFSERASEAYFLGQLQV ARHETGGGVNFTLTQPRANVDLGVGYTAVVATATVRNPVTDMGNLPQNFYLGRGAPPLLD NAAAVYLRNAVVAGNRLGPAQPVPVFGCAQVPRRAGMDHGQDAVCEFIATPVSTDVNYFR RPCNPRGRAAGGVYAGDKEGDVTALMYDHGQSDPSRAFAATANPWASQRFSYGDLLYNGA YHLNGASPVLSPCFKFFTSADIAAKHRCLERLIVETGSAVSTATAASDVQFKRPPGCREL VEDPCGLFQEAYPLTCASDPALLRSARNGEAHARETHFAQYLVYDASPLKGLAL
Coding Sequence Details
Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None
Recommended Growth Condition:
Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:
bacterial
Marker:
kanamycin
Bacterial Selection Condition:
50ug/mL kanamycin
Growth Condition:
Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:
Conditions for Gateway-type vectors in recombined (with insert) form and other kanamycin resistant vectors.
Protein Expression Results:
None
Recommended expression in:
Not Applicable
Vector Name:
pDONR221
Synonyms:
''
Description:
Gateway®, donor (entry), recombinational cloning clone, bacterial expression expression with rrnB T2 and rrnB T1 and M13 forward and attP1 and ccdB and CmR and cat_promoter-var002 and attP2 and T7 promoter and M13 reverse and KanR and ori; 50ug/mL of Kanamycin resistance in Pichia;
Comments:
The position of features were determined for the unrecombined (empty) form of the vector, which is described in detail on the Invitrogen website.
Size (bp):
4762
Parent Vector:
None
Properties:
Gateway, bacterial expression, donor (entry), recombinational cloning
Author Name:
Invitrogen
Publications:
None
Vector Map:
Vector Sequence:
Sequence:
Vector Features:
Type
Name
Description
Start
End
CDS
ccdB
CcdB, a bacterial toxin that poisons DNA gyrase
1197
1502
CDS
CmR
confers resistance to chloramphenicol
1847
2506
CDS
KanR
confers resistance to kanamycin in bacteria or G418 (Geneticin) in eukaryotes
3156
3965
Terminator
rrnB T2
transcription terminator T2 from the E. coli rrnB gene
268
295
Terminator
rrnB T1
transcription terminator T1 from the E. coli rrnB gene
387
473
primer_bind
M13 forward
common sequencing primer, one of multiple similar variants
537
553
primer_bind
M13 reverse
common sequencing primer, one of multiple similar variants
3027
3043
promoter
cat_promoter-var002
promoter of the E. coli cat gene encoding chloramphenicol acetyltransferase
2507
2609
promoter
T7 promoter
promoter for bacteriophage T7 RNA polymerase
3004
3022
protein binding site
attP1
recombination site for the Gateway BP reaction
570
801
protein binding site
attP2
recombination site for the Gateway BP reaction
2754
2985
rep_origin
ori
high-copy-number ColE1/pMB1/pBR322/pUC origin of replication
4112
4700
