Gene:
Gene Symbol:
Gene Name:
Original Clone ID:
ORFeome_LaBaer-011.0104
Keyword:
Codon optimized
Species:
Homo sapiens
Type:
cDNA
Vector Name:
pDONR221
Format:
FUSION
Source:
Center for Personalized Diagnostics
Description:
None
Comments:
None
Mutation / Discrepancy:
Yes / No
Publications:
None
Authors:
Center for Personalized Diagnostics
HsCD00820752
Price:
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AVAILABLE
No restriction
Special MTA: None
Special MTA: None
Insert sequence: 5277nts
Open reading frame: 1 to 5277
ATGGATCTTGGAACAGCTGAGGGTACCAGGTGCACGGACCCGCCTGCAGGAAAGCCCGCT
ATGGCGCCCAAACGCAAGGGTGGCCTGAAACTGAACGCCATCTGCGCCAAGTTGAGCCGG
CAAGTGGTGGTGGAGAAGCGAGCTGATGCCGGATCCCACACTGAGGGAAGTCCCTCTCAG
CCACGGGACCAAGAGCGCAGCGGACCTGAATCAGGAGCAGCACGCGCCCCCCGGAGTGAG
GAAGACAAGCGTCGCGCTGTGATTGAGAAGTGGGTCAACGGGGAGTACAGTGAAGAGCCA
GCCCCCACACCAGTGTTGGGGCGGATTGCCCGTGAGGGACTGGAGCTTCCTCCCGAGGGT
GTCTACATGGTGCAGCCCCAAGGGTGCAGCGACGAGGAGGACCACGCGGAAGAACCCTCC
AAGGATGGCGGTGCCCTGGAGGAGAAGGATTCGGACGGCGCAGCTTCCAAGGAGGACAGC
GGTCCATCCACTAGGCAGGCTTCCGGAGAGGCCTCCTCTCTGCGGGACTACGCGGCCTCT
ACCATGACTGAGTTCCTCGGCATGTTTGGCTATGATGACCAGAACACGCGGGACGAGCTG
GCCAGAAAGATCAGTTTTGAGAAGCTGCACGCGGGCTCCACACCTGAGGCAGCCACCTCC
TCCATGCTCCCCACCTCCGAGGATACCCTTAGCAAGCGGGCGCGGTTCTCTAAGTACGAG
GAGTACATCCGCAAGCTCAAGGCTGGCGAGCAGCTCTCCTGGCCGGCTCCCAGCACCAAA
ACCGAGGAGAGGGTTGGCAAGGAGGTTGTGGGAACCCTGCCCGGACTTCGGCTGCCTAGC
TCTACGGCACACCTTGAGACTAAGGCCACCATCCTGCCCCTACCGTCGCACAGCAGTGTC
CAGATGCAGAACCTGGTAGCACGGGCCTCCAAGTACGACTTCTTCATCCAAAAACTGAAG
ACCGGCGAGAACCTGCGGCCCCAGAACGGGAGCACCTACAAGAAGCCATCCAAATACGAC
CTGGAAAATGTCAAGTACCTGCACCTCTTCAAACCTGGGGAGGGCAGCCCCGACATGGGC
GGCGCCATCGCCTTCAAAACCGGCAAGGTGGGCCGCCCTTCAAAGTACGATGTCCGGGGC
ATTCAGAAGCCAGGACCAGCTAAGGTTCCGCCTACACCCAGTCTGGCTCCAGCACCCCTT
GCTAGCGTGCCAAGTGCCCCATCTGCCCCCGGGCCAGGGCCAGAACCTCCAGCTTCCCTG
TCTTTCAACACTCCCGAGTACCTGAAGTCCACCTTCTCTAAAACCGACTCCATCACCACA
GGGACCGTTTCAACTGTGAAGAACGGTCTGCCCACAGATAAACCAGCCGTCACTGAGGAT
GTAAACATCTACCAGAAATATATTGCCAGATTCTCGGGCAGCCAGCACTGCGGCCACATC
CACTGTGCCTACCAGTACCGGGAACACTATCATTGCCTAGACCCTGAGTGTAACTACCAG
AGGTTCACGAGCAAGCAGGACGTCATCCGGCACTACAACATGCATAAGAAGCGCGACAAC
TCACTGCAGCACGGCTTTATGCGTTTCAGCCCGTTGGACGACTGCTCTGTCTACTACCAC
GGATGCCACCTCAATGGGAAGAGCACCCACTACCACTGTATGCAGGTTGGCTGTAACAAG
GTCTACACGAGTACGTCTGACGTGATGACCCACGAGAACTTCCACAAGAAAAATACCCAG
CTCATTAACGACGGCTTCCAGCGGTTCCGAGCCACCGAAGACTGTGGCACAGCCGACTGT
CAGTTCTACGGACAGAAGACCACGCATTTTCATTGCAGGCGCCCCGGCTGCACATTCACA
TTCAAGAACAAGTGTGACATCGAGAAGCACAAGAGCTACCACATCAAGGACGATGCCTAC
GCCAAGGACGGTTTCAAGAAGTTCTACAAGTATGAGGAGTGTAAATACGAGGGATGCGTG
TACAGCAAGGCTACCAACCACTTTCACTGCATTCGCGCCGGGTGCGGCTTCACATTTACC
TCCACCAGCCAGATGACCTCCCATAAGCGCAAACACGAGCGACGGCACATTCGCTCGTCT
GGCGCGCTGGGTCTGCCGCCCTCGCTGCTCGGGGCAAAGGACACGGAGCACGAGGAATCT
TCCAACGACGACCTAGTTGACTTCTCCGCCCTGAGCAGCAAGAATTCCAGTCTGAGTGCC
TCCCCTACATCCCAGCAGTCCTCAGCGTCTCTGGCGGCTGCCACTGCTGCAACCGAGGCC
GGGCCCAGTGCAACGAAACCTCCCAACAGCAAGATCTCGGGCCTGCTTCCTCAGGGCTTG
CCTGGCTCAATCCCGCTGGCACTGGCCCTATCCAACTCCGGACTGCCCACCCCTACGCCC
TACTTCCCCATATTGGCTGGCCGCGGGAGTACTTCCCTTCCCGTGGGCACCCCCAGTCTC
CTGGGCGCTGTGTCTTCTGGGTCAGCAGCATCTGCTACCCCTGACACACCTACACTGGTT
GCATCGGGCGCTGGAGACTCAGCACCAGTGGCCGCCGCATCGGTCCCGGCTCCTCCCGCT
TCTATCATGGAGAGGATCTCTGCCAGCAAGGGCCTCATCTCGCCCATGATGGCTAGGCTC
GCCGCAGCGGCCCTCAAGCCCTCGGCAACCTTTGACCCAGGAAGCGGGCAACAGGTTACC
CCAGCCAGGTTTCCCCCAGCCCAAGTTAAGCCGGAGCCCGGTGAGAGCACCGGAGCTCCA
GGCCCCCATGAAGCCTCCCAGGACCGCAGTCTGGACTTGACCGTGAAGGAGCCAAGCAAC
GAATCAAATGGCCACGCAGTCCCGGCAAATTCATCTCTTTTATCATCGCTTATGAATAAG
ATGTCTCAGGGCAACCCTGGACTCGGAAGCTTGCTGAACATTAAGGCGGAAGCGGAAGGG
AGCCCCGCTGCCGAGCCTTCGCCTTTCCTGGGCAAGGCCGTCAAGGCGCTGGTTCAGGAG
AAGTTGGCAGAGCCCTGGAAGGTGTACCTGCGGAGGTTTGGTACAAAGGACTTCTGTGAC
GGCCAGTGTGACTTCCTCCACAAGGCTCACTTCCACTGCGTCGTGGAAGAATGCGGCGCG
CTCTTCAGTACCTTGGACGGGGCCATCAAGCACGCAAACTTTCATTTCCGGACAGAGGGA
GGGGCAGCAAAAGGAAACACAGAGGCTGCCTTTCCAGCCTCGGCCGCCGAAACCAAACCC
CCCATGGCACCATCGTCACCTCCGGTCCCTCCTGTCACCACGGCCACAGTTTCTTCTCTG
GAGGGGCCCGCTCCAAGTCCGGCCTCCGTGCCATCTACCCCCACCCTTCTGGCCTGGAAG
CAGTTGGCTTCCACCATACCCCAGATGCCTCAGATCCCAGCGTCCGTGCCTCACCTTCCC
GCCTCGCCCTTGGCTACCACTTCCCTAGAGAACGCCAAGCCCCAGGTCAAACCCGGATTC
CTCCAGTTCCAGGAGAACGATCCCTGCCTGGCCACGGACTGCAAGTACGCCAACAAGTTC
CATTTTCACTGTCTGTTTGGGAACTGCAAATACGTGTGCAAAACGTCTGGTAAGGCCGAA
TCCCACTGCCTGGACCATATCAACCCCAACAACAACCTAGTCAACGTGCGGGACCAGTTT
GCATACTACTCCCTGCAGTGTCTCTGTCCCAATCAGCACTGTGAGTTCCGAATGCGCGGG
CACTATCACTGCCTCCGAACCGGCTGCTATTTTGTGACCAACATCACTACCAAGCTGCCC
TGGCACATTAAGAAGCATGAGAAGGCGGAGCGACGTGCAGCCAATGGCTTCAAATACTTC
ACCAAGCGCGAGGAATGTGGGAGACTAGGATGCAAATATAACCAGGTGAACAGCCATTTC
CACTGCATCCGCGAGGGCTGCCAGTTCTCCTTCCTCCTGAAGCATCAGATGACATCCCAC
GCCCGGAAGCACATGAGGCGGATGCTCGGCAAGAACTTCGACCGTGTCCCCCCCTCCCAA
GGCCCCCCAGGCCTGATGGATGCTGAGACAGATGAGTGCATGGACTATACTGGCTGCAGT
CCAGGCGCTATGTCCTCTGAGTCATCCACAATGGATCGGAGTTGCTCTAGCACCCCAGTG
GGTAACGAGAGCACTGCCGCAGGCAATACCATCTCCATGCCGACCGCCTCAGGGGCCAAA
AAGCGATTCTGGATCATCGAGGACATGTCGCCCTTCGGCAAGCGGCGGAAGACGGCGTCT
TCCCGGAAGATGCTCGACGAGGGAATGATGCTGGAGGGCTTCAGGCGCTTCGACCTTTAC
GAGGACTGTAAGGACGCAGCTTGTCAGTTTTCGCTCAAGGTCACCCATTACCACTGCACT
CGAGAGAACTGCGGCTACAAGTTCTGCGGGCGCACGCACATGTACAAACACGCGCAGCAC
CACGACCGGGTGGACAACTTGGTGCTTGACGACTTCAAGCGCTTCAAGGCCTCACTCAGT
TGCCACTTCGCCGACTGCCCCTTCTCGGGAACAAGCACACATTTCCATTGCCTTCGCTGT
CGCTTCCGATGCACCGACAGTACCAAGGTGACCGCGCATCGCAAGCATCACGGCAAACAG
GACGTGATCAGCGCCGCGGGCTTCTGCCAATTCAGCTCCTCCGCGGACTGCGCTGTGCCC
GATTGCAAGTATAAGCTGAAGTGCTCACACTTCCATTGTACCTTCCCAGGCTGCCGCCAC
ACGGTGGTGGGCATGTCACAGATGGACTCTCACAAGCGCAAGCACGAGAAACAGGAGCGC
GGGGAGCCAGCTGCTGAGGGCCCTGCCCCAGGGCCTCCCATTAGTTTAGACGGCTCCTTG
TCGCTCGGAGCTGAGCCGGGTTCCCTGCTATTCCTTCAGTCAGCGGCGGCTGGACTAGGA
CTGGCTTTAGGAGATGCTGGCGATCCCGGACCTCCTGATGCAGCTGCTCCAGGTCCGAGA
GAGGGAGCGGCTGCGGCTGCTGCTGCAGCTGGGGAGTCCTCTCAAGAAGACGAGGAAGAG
GAGCTTGAGCTGCCGGAGGAGGAGGCTGAAGATGACGAGGACGAGGATGACGACGAAGAT
GATGATGACGAAGACGACGATGAAGACGATGACGATGAGGACCTGCGCACCGATTCGGAG
GAGTCGCTACCCGAAGCTGCTGCGGAAGCAGCAGGCGCGGGAGCGCGAACACCAGCATTA
GCAGCTTTGGCAGCCTTAGGCGCACCTGGCCCAGCTCCAACCGCAGCCTCATCGCCA
Protein sequence predicted based on nucleotide sequence
MDLGTAEGTRCTDPPAGKPAMAPKRKGGLKLNAICAKLSRQVVVEKRADAGSHTEGSPSQ PRDQERSGPESGAARAPRSEEDKRRAVIEKWVNGEYSEEPAPTPVLGRIAREGLELPPEG VYMVQPQGCSDEEDHAEEPSKDGGALEEKDSDGAASKEDSGPSTRQASGEASSLRDYAAS TMTEFLGMFGYDDQNTRDELARKISFEKLHAGSTPEAATSSMLPTSEDTLSKRARFSKYE EYIRKLKAGEQLSWPAPSTKTEERVGKEVVGTLPGLRLPSSTAHLETKATILPLPSHSSV QMQNLVARASKYDFFIQKLKTGENLRPQNGSTYKKPSKYDLENVKYLHLFKPGEGSPDMG GAIAFKTGKVGRPSKYDVRGIQKPGPAKVPPTPSLAPAPLASVPSAPSAPGPGPEPPASL SFNTPEYLKSTFSKTDSITTGTVSTVKNGLPTDKPAVTEDVNIYQKYIARFSGSQHCGHI HCAYQYREHYHCLDPECNYQRFTSKQDVIRHYNMHKKRDNSLQHGFMRFSPLDDCSVYYH GCHLNGKSTHYHCMQVGCNKVYTSTSDVMTHENFHKKNTQLINDGFQRFRATEDCGTADC QFYGQKTTHFHCRRPGCTFTFKNKCDIEKHKSYHIKDDAYAKDGFKKFYKYEECKYEGCV YSKATNHFHCIRAGCGFTFTSTSQMTSHKRKHERRHIRSSGALGLPPSLLGAKDTEHEES SNDDLVDFSALSSKNSSLSASPTSQQSSASLAAATAATEAGPSATKPPNSKISGLLPQGL PGSIPLALALSNSGLPTPTPYFPILAGRGSTSLPVGTPSLLGAVSSGSAASATPDTPTLV ASGAGDSAPVAAASVPAPPASIMERISASKGLISPMMARLAAAALKPSATFDPGSGQQVT PARFPPAQVKPEPGESTGAPGPHEASQDRSLDLTVKEPSNESNGHAVPANSSLLSSLMNK MSQGNPGLGSLLNIKAEAEGSPAAEPSPFLGKAVKALVQEKLAEPWKVYLRRFGTKDFCD GQCDFLHKAHFHCVVEECGALFSTLDGAIKHANFHFRTEGGAAKGNTEAAFPASAAETKP PMAPSSPPVPPVTTATVSSLEGPAPSPASVPSTPTLLAWKQLASTIPQMPQIPASVPHLP ASPLATTSLENAKPQVKPGFLQFQENDPCLATDCKYANKFHFHCLFGNCKYVCKTSGKAE SHCLDHINPNNNLVNVRDQFAYYSLQCLCPNQHCEFRMRGHYHCLRTGCYFVTNITTKLP WHIKKHEKAERRAANGFKYFTKREECGRLGCKYNQVNSHFHCIREGCQFSFLLKHQMTSH ARKHMRRMLGKNFDRVPPSQGPPGLMDAETDECMDYTGCSPGAMSSESSTMDRSCSSTPV GNESTAAGNTISMPTASGAKKRFWIIEDMSPFGKRRKTASSRKMLDEGMMLEGFRRFDLY EDCKDAACQFSLKVTHYHCTRENCGYKFCGRTHMYKHAQHHDRVDNLVLDDFKRFKASLS CHFADCPFSGTSTHFHCLRCRFRCTDSTKVTAHRKHHGKQDVISAAGFCQFSSSADCAVP DCKYKLKCSHFHCTFPGCRHTVVGMSQMDSHKRKHEKQERGEPAAEGPAPGPPISLDGSL SLGAEPGSLLFLQSAAAGLGLALGDAGDPGPPDAAAPGPREGAAAAAAAAGESSQEDEEE ELELPEEEAEDDEDEDDDEDDDDEDDDEDDDDEDLRTDSEESLPEAAAEAAGAGARTPAL AALAALGAPGPAPTAASSP
Coding Sequence Details
Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None
Recommended Growth Condition:
Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:
bacterial
Marker:
kanamycin
Bacterial Selection Condition:
50ug/mL kanamycin
Growth Condition:
Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:
Conditions for Gateway-type vectors in recombined (with insert) form and other kanamycin resistant vectors.
Protein Expression Results:
None
Recommended expression in:
Not Applicable
Vector Name:
pDONR221
Synonyms:
''
Description:
Gateway®, donor (entry), recombinational cloning clone, bacterial expression expression with rrnB T2 and rrnB T1 and M13 forward and attP1 and ccdB and CmR and cat_promoter-var002 and attP2 and T7 promoter and M13 reverse and KanR and ori; 50ug/mL of Kanamycin resistance in Pichia;
Comments:
The position of features were determined for the unrecombined (empty) form of the vector, which is described in detail on the Invitrogen website.
Size (bp):
4762
Parent Vector:
None
Properties:
Gateway, bacterial expression, donor (entry), recombinational cloning
Author Name:
Invitrogen
Publications:
None
Vector Map:
Vector Sequence:
Sequence:
Vector Features:
Type
Name
Description
Start
End
CDS
ccdB
CcdB, a bacterial toxin that poisons DNA gyrase
1197
1502
CDS
CmR
confers resistance to chloramphenicol
1847
2506
CDS
KanR
confers resistance to kanamycin in bacteria or G418 (Geneticin) in eukaryotes
3156
3965
Terminator
rrnB T2
transcription terminator T2 from the E. coli rrnB gene
268
295
Terminator
rrnB T1
transcription terminator T1 from the E. coli rrnB gene
387
473
primer_bind
M13 forward
common sequencing primer, one of multiple similar variants
537
553
primer_bind
M13 reverse
common sequencing primer, one of multiple similar variants
3027
3043
promoter
cat_promoter-var002
promoter of the E. coli cat gene encoding chloramphenicol acetyltransferase
2507
2609
promoter
T7 promoter
promoter for bacteriophage T7 RNA polymerase
3004
3022
protein binding site
attP1
recombination site for the Gateway BP reaction
570
801
protein binding site
attP2
recombination site for the Gateway BP reaction
2754
2985
rep_origin
ori
high-copy-number ColE1/pMB1/pBR322/pUC origin of replication
4112
4700
