Gene:
Gene Symbol:
Gene Name:
Original Clone ID:
ORFeome_LaBaer-005.0024
Keyword:
Codon optimized
Species:
Homo sapiens
Type:
cDNA
Vector Name:
pDONR221
Format:
FUSION
Source:
Center for Personalized Diagnostics
Description:
None
Comments:
None
Mutation / Discrepancy:
Yes / No
Publications:
None
Authors:
Center for Personalized Diagnostics
HsCD00821054
Price:
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AVAILABLE
No restriction
Special MTA: None
Special MTA: None
Insert sequence: 5178nts
Open reading frame: 1 to 5178
ATGGCTACAGGGAGTGCCCAGGGCAACTTCACTGGACATACCAAGAAGACAAATGGCAAT
AATGGCACCAATGGCGCACTCGTCCAAAGCCCTTCTAATCAGAGTGCCCTTGGAGCAGGG
GGAGCGAACAGTAATGGAAGTGCGGCCAGAGTGTGGGGTGTAGCCACAGGCTCCAGCTCT
GGCCTGGCTCACTGCTCTGTCAGTGGTGGGGATGGAAAAATGGACACTATGATTGGAGAT
GGGAGAAGTCAGAATTGCTGGGGTGCTTCCAACTCCAATGCTGGCATTAATCTTAACCTT
AATCCTAATGCCAACCCAGCTGCCTGGCCTGTACTTGGACATGAAGGAACCGTGGCGACA
GGCAACCCTTCCAGTATTTGCAGTCCAGTCAGTGCCATAGGTCAAAATATGGGCAACCAG
AACGGGAACCCAACAGGCACTTTAGGTGCTTGGGGAAACTTGCTGCCACAAGAGAGCACA
GAACCACAAACGTCCACTTCTCAGAATGTGTCTTTCAGCGCACAACCTCAGAACCTTAAC
ACTGATGGACCAAATAACACTAACCCCATGAACTCTTCACCCAACCCTATCAATGCAATG
CAGACAAATGGACTGCCAAACTGGGGCATGGCTGTTGGTATGGGGGCCATCATCCCGCCC
CACCTTCAAGGCCTTCCTGGTGCTAATGGATCATCAGTTTCTCAAGTCAGTGGGGGCAGT
GCTGAAGGAATAAGCAATTCTGTGTGGGGACTGTCCCCAGGTAACCCTGCCACAGGAAAT
AGCAATTCTGGGTTCAGTCAGGGGAATGGAGACACTGTGAACTCAGCATTAAGTGCTAAA
CAAAATGGATCCAGCAGTGCTGTGCAAAAGGAAGGAAGTGGAGGAAATGCTTGGGATTCA
GGACCTCCTGCTGGTCCTGGAATACTCGCCTGGGGAAGGGGCAGTGGCAACAATGGCGTT
GGTAATATCCATTCAGGAGCTTGGGGCCACCCCAGCCGAAGCACCTCTAACGGTGTGAAT
GGGGAATGGGGAAAGCCCCCAAACCAGCATTCCAACAGTGACATCAATGGGAAAGGATCA
ACAGGGTGGGAGAGTCCTAGTGTCACCAGCCAGAACCCTACCGTACAGCCTGGTGGTGAA
CACATGAACTCCTGGGCCAAAGCGGCATCTTCTGGAACTACAGCAAGTGAAGGAAGTAGT
GATGGTTCTGGCAACCACAATGAAGGAAGCACTGGGAGGGAAGGAACGGGAGAAGGCCGA
AGGCGAGATAAAGGGATTATAGACCAAGGGCACATCCAGTTGCCAAGGAATGATCTTGAC
CCAAGAGTTCTGTCTAATACTGGTTGGGGACAGACTCCTGTAAAGCAAAACACTGCCTGG
GAATTTGAAGAATCCCCTAGGTCTGAAAGGAAAAATGACAATGGGACAGAGGCCTGGGGT
TGTGCAGCTACTCAGGCTTCAAACTCAGGAGGGAAGAACGATGGGTCCATCATGAACAGT
ACAAATACCTCTTCAGTATCTGGGTGGGTCAACGCGCCACCAGCCGCTGTGCCAGCAAAC
ACAGGTTGGGGAGACAGCAACAACAAAGCGCCAAGTGGCCCGGGGGTTTGGGGTGACTCG
ATAAGCTCTACTGCTGTTAGTACTGCTGCTGCTGCCAAGAGTGGCCATGCTTGGAGTGGG
GCCGCAAATCAGGAGGACAAGTCACCCACCTGGGGTGAGCCTCCAAAGCCCAAATCCCAA
CACTGGGGAGATGGACAAAGATCAAATCCAGCCTGGAGTGCAGGAGGGGGAGATTGGGCA
GATTCATCGTCTGTCCTTGGACACTTGGGGGATGGGAAAAAAAATGGATCTGGATGGGAT
GCTGACAGTAATAGGTCAGGGTCTGGTTGGAATGACACCACGAGATCTGGGAACAGTGGC
TGGGGCAACAGCACAAATACAAAGGCCAATCCAGGTACAAACTGGGGTGAGACTTTAAAA
CCTGGCCCCCAACAGAACTGGGCTAGCAAACCCCAAGACAACAATGTGAGTAACTGGGGA
GGAGCTGCTTCTGTGAAACAGACAGGAACAGGGTGGATCGGGGGACCGGTACCGGTCAAA
CAGAAGGACAGCAGTGAAGCAACTGGCTGGGAAGAACCCTCTCCACCGTCCATTCGCCGC
AAAATGGAAATTGATGATGGTACCTCAGCTTGGGGCGACCCAAGCAACTATAACAATAAA
ACTGTAAACATGTGGGATAGAAACAACCCGGTCATCCAGAGCAGTACCACGACCAATACC
ACCACCACCACCACCACTACCACGAGCAACACCACACACAGGGTCGAGACGCCGCCCCCG
CACCAGGCCGGTACTCAGCTGAATCGATCACCGTTGCTTGGTCCAGTTTCATCAGGCTGG
GGAGAAATGCCTAATGTTCACTCAAAGACTGAAAACTCTTGGGGAGAACCATCCTCCCCT
TCTACCCTGGTGGATAATGGCACAGCAGCATGGGGGAAGCCACCCAGCAGTGGCAGCGGG
TGGGGAGATCACCCTGCAGAGCCGCCGGTGGCATTTGGAAGAGCTGGCGCACCTGTTGCT
GCCTCAGCCCTGTGCAAACCAGCTTCAAAATCTATGCAAGAAGGCTGGGGCAGTGGTGGG
GATGAAATGAACCTCAGTACCAGCCAGTGGGAGGATGAAGAAGGGGACGTGTGGAATAAT
GCTGCTTCCCAAGAAAGCACCTCCTCCTGCAGCTCCTGGGGGAACGCCCCCAAAAAAGGA
CTTCAAAAGGGCATGAAGACGTCTGGCAAGCAGGATGAGGCCTGGATCATGAGCCGGCTG
ATCAAACAACTCACAGACATGGGCTTCCCGAGAGAGCCAGCTGAGGAGGCCTTGAAGAGT
AACAATATGAATCTTGATCAGGCCATGAGCGCTCTGCTGGAAAAGAAGGTGGACGTGGAC
AAGCGTGGGCTGGGAGTGACCGACCATAATGGAATGGCCGCCAAGCCCCTCGGCTGCCGC
CCGCCAATCTCCAAAGAGTCTTCCGTGGACCGCCCCACCTTTCTTGACAAGGATGGCGGC
CTCGTGGAAGAGCCCACGCCTTCACCGTTCTTGCCTTCCCCAAGCCTGAAGCTCCCCCTT
TCACACAGTGCACTCCCCAGTCAGGCCCTGGGTGGGATTGCCTCCGGGCTGGGCATGCAA
AACTTGAATTCTTCTAGACAGATACCGAGTGGCAATCTGGGTATGTTTGGCAATAGTGGA
GCAGCACAAGCCAGGACCATGCAGCAGCCGCCACAGCCACCAGTGCAGCCTCTTAACTCT
TCCCAGCCCAGTCTCCGTGCTCAAGTGCCTCAGTTTCTATCCCCTCAGGTTCAAGCACAG
CTTTTGCAGTTTGCAGCAAAAAACATTGGTCTAAACCCTGCACTATTAACCTCGCCAATT
AATCCTCAACATATGACGATGTTGAACCAGCTCTATCAGCTGCAGCTGGCATACCAACGT
TTACAAATCCAGCAGCAGATGTTACAGGCCCAGCGTAATGTGTCCGGATCCATGAGACAA
CAGGAGCAGCAAGTTGCGCGCACAATCACTAATCTGCAGCAGCAGATCCAGCAGCACCAG
CGCCAGCTGGCCCAGGCCCTGCTCGTGAAGCAGCCACCACCGCCACCGCCCCCGCCGCAC
CTGTCTCTGCACCCCTCTGCAGGCAAATCGGCCATGGACAGCTTCCCCTCGCACCCACAG
ACTCCCGGCCTACCTGACCTGCAGACCAAAGAGCAGCAGTCTTCACCCAACACCTTTGCT
CCTTACCCTCTCGCTGGACTGAACCCAAACATGAATGTCAACAGCATGGACATGACCGGT
GGCTTGTCGGTGAAGGACCCATCCCAGTCCCAGTCACGCCTCCCCCAGTGGACGCACCCC
AACTCCATGGATAACTTGCCCAGTGCCGCTTCCCCCCTGGAGCAGAACCCTAGCAAGCAT
GGTGCTATCCCTGGAGGTCTAAGCATTGGGCCTCCAGGTAAGTCCTCCATTGATGACTCC
TATGGCCGGTACGATTTAATCCAGAACAGTGAGTCACCAGCCAGTCCTCCCGTAGCTGTT
CCCCATAGCTGGTCACGTGCCAAATCTGACAGTGATAAAATCTCAAATGGCTCTAGCATC
AACTGGCCCCCAGAATTCCATCCGGGAGTTCCATGGAAAGGACTGCAGAATATTGACCCT
GAGAATGACCCTGACGTCACTCCTGGCAGTGTCCCCACTGGGCCTACCATCAACACCACC
ATCCAGGATGTCAACCGCTACCTCCTCAAGAGTGGAGGGTCCTCCCCGCCATCATCTCAG
AATGCCACGCTGCCTTCTTCGAGTGCCTGGCCACTCAGTGCCTCCGGCTACAGTAGCTCT
TTCAGCAGCATTGCATCCGCACCTAGTGTTGCAGGTAAACTGTCAGACATCAAATCGACG
TGGTCCTCTGGCCCTACCTCCCACACGCAAGCCTCTCTGTCTCATGAACTATGGAAGGTG
CCCAGAAACAGTACTGCACCCACGAGGCCACCTCCAGGGTTAACCAATCCCAAGCCCTCC
TCCACCTGGGGTGCCAGCCCCCTCGGCTGGACCAGCTCCTACTCCTCGGGTTCTGCCTGG
AGCACCGACACCTCAGGAAGAACCAGCAGCTGGCTCGTTCTTCGAAACCTCACTCCCCAG
ATTGATGGTTCTACACTGCGGACATTGTGTTTGCAACATGGGCCTCTTATCACATTCCAC
CTGAATCTGACTCAAGGCAATGCTGTGGTCCGGTACAGCTCCAAGGAGGAGGCTGCCAAG
GCCCAGAAGTCTCTGCACATGTGCGTCCTGGGAAACACTACCATCCTGGCCGAGTTCGCT
GGTGAAGAAGAAGTGAATCGCTTCTTAGCCCAAGGCCAGGCGCTGCCACCCACTTCCAGC
TGGCAGTCCAGCAGCGCGTCCAGCCAGCCGCGGCTCAGCGCAGCGGGCAGCTCCCATGGC
CTGGTACGCAGCGACGCTGGCCACTGGAACGCCCCGTGCCTGGGTGGCAAGGGGAGCAGT
GAGCTGCTGTGGGGCGGGGTGCCCCAGTACTCCAGCAGCCTGTGGGGCCCGCCCAGCGCC
GACGACAGCAGGGTGATAGGCAGCCCCACGCCGCTAACCACCCTGCTGCCTGGGGACCTG
CTCAGCGGGGAGTCCCTG
Protein sequence predicted based on nucleotide sequence
MATGSAQGNFTGHTKKTNGNNGTNGALVQSPSNQSALGAGGANSNGSAARVWGVATGSSS GLAHCSVSGGDGKMDTMIGDGRSQNCWGASNSNAGINLNLNPNANPAAWPVLGHEGTVAT GNPSSICSPVSAIGQNMGNQNGNPTGTLGAWGNLLPQESTEPQTSTSQNVSFSAQPQNLN TDGPNNTNPMNSSPNPINAMQTNGLPNWGMAVGMGAIIPPHLQGLPGANGSSVSQVSGGS AEGISNSVWGLSPGNPATGNSNSGFSQGNGDTVNSALSAKQNGSSSAVQKEGSGGNAWDS GPPAGPGILAWGRGSGNNGVGNIHSGAWGHPSRSTSNGVNGEWGKPPNQHSNSDINGKGS TGWESPSVTSQNPTVQPGGEHMNSWAKAASSGTTASEGSSDGSGNHNEGSTGREGTGEGR RRDKGIIDQGHIQLPRNDLDPRVLSNTGWGQTPVKQNTAWEFEESPRSERKNDNGTEAWG CAATQASNSGGKNDGSIMNSTNTSSVSGWVNAPPAAVPANTGWGDSNNKAPSGPGVWGDS ISSTAVSTAAAAKSGHAWSGAANQEDKSPTWGEPPKPKSQHWGDGQRSNPAWSAGGGDWA DSSSVLGHLGDGKKNGSGWDADSNRSGSGWNDTTRSGNSGWGNSTNTKANPGTNWGETLK PGPQQNWASKPQDNNVSNWGGAASVKQTGTGWIGGPVPVKQKDSSEATGWEEPSPPSIRR KMEIDDGTSAWGDPSNYNNKTVNMWDRNNPVIQSSTTTNTTTTTTTTTSNTTHRVETPPP HQAGTQLNRSPLLGPVSSGWGEMPNVHSKTENSWGEPSSPSTLVDNGTAAWGKPPSSGSG WGDHPAEPPVAFGRAGAPVAASALCKPASKSMQEGWGSGGDEMNLSTSQWEDEEGDVWNN AASQESTSSCSSWGNAPKKGLQKGMKTSGKQDEAWIMSRLIKQLTDMGFPREPAEEALKS NNMNLDQAMSALLEKKVDVDKRGLGVTDHNGMAAKPLGCRPPISKESSVDRPTFLDKDGG LVEEPTPSPFLPSPSLKLPLSHSALPSQALGGIASGLGMQNLNSSRQIPSGNLGMFGNSG AAQARTMQQPPQPPVQPLNSSQPSLRAQVPQFLSPQVQAQLLQFAAKNIGLNPALLTSPI NPQHMTMLNQLYQLQLAYQRLQIQQQMLQAQRNVSGSMRQQEQQVARTITNLQQQIQQHQ RQLAQALLVKQPPPPPPPPHLSLHPSAGKSAMDSFPSHPQTPGLPDLQTKEQQSSPNTFA PYPLAGLNPNMNVNSMDMTGGLSVKDPSQSQSRLPQWTHPNSMDNLPSAASPLEQNPSKH GAIPGGLSIGPPGKSSIDDSYGRYDLIQNSESPASPPVAVPHSWSRAKSDSDKISNGSSI NWPPEFHPGVPWKGLQNIDPENDPDVTPGSVPTGPTINTTIQDVNRYLLKSGGSSPPSSQ NATLPSSSAWPLSASGYSSSFSSIASAPSVAGKLSDIKSTWSSGPTSHTQASLSHELWKV PRNSTAPTRPPPGLTNPKPSSTWGASPLGWTSSYSSGSAWSTDTSGRTSSWLVLRNLTPQ IDGSTLRTLCLQHGPLITFHLNLTQGNAVVRYSSKEEAAKAQKSLHMCVLGNTTILAEFA GEEEVNRFLAQGQALPPTSSWQSSSASSQPRLSAAGSSHGLVRSDAGHWNAPCLGGKGSS ELLWGGVPQYSSSLWGPPSADDSRVIGSPTPLTTLLPGDLLSGESL
Coding Sequence Details
Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None
Recommended Growth Condition:
Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:
bacterial
Marker:
kanamycin
Bacterial Selection Condition:
50ug/mL kanamycin
Growth Condition:
Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:
Conditions for Gateway-type vectors in recombined (with insert) form and other kanamycin resistant vectors.
Protein Expression Results:
None
Recommended expression in:
Not Applicable
Vector Name:
pDONR221
Synonyms:
''
Description:
Gateway®, donor (entry), recombinational cloning clone, bacterial expression expression with rrnB T2 and rrnB T1 and M13 forward and attP1 and ccdB and CmR and cat_promoter-var002 and attP2 and T7 promoter and M13 reverse and KanR and ori; 50ug/mL of Kanamycin resistance in Pichia;
Comments:
The position of features were determined for the unrecombined (empty) form of the vector, which is described in detail on the Invitrogen website.
Size (bp):
4762
Parent Vector:
None
Properties:
Gateway, bacterial expression, donor (entry), recombinational cloning
Author Name:
Invitrogen
Publications:
None
Vector Map:
Vector Sequence:
Sequence:
Vector Features:
Type
Name
Description
Start
End
CDS
ccdB
CcdB, a bacterial toxin that poisons DNA gyrase
1197
1502
CDS
CmR
confers resistance to chloramphenicol
1847
2506
CDS
KanR
confers resistance to kanamycin in bacteria or G418 (Geneticin) in eukaryotes
3156
3965
Terminator
rrnB T2
transcription terminator T2 from the E. coli rrnB gene
268
295
Terminator
rrnB T1
transcription terminator T1 from the E. coli rrnB gene
387
473
primer_bind
M13 forward
common sequencing primer, one of multiple similar variants
537
553
primer_bind
M13 reverse
common sequencing primer, one of multiple similar variants
3027
3043
promoter
cat_promoter-var002
promoter of the E. coli cat gene encoding chloramphenicol acetyltransferase
2507
2609
promoter
T7 promoter
promoter for bacteriophage T7 RNA polymerase
3004
3022
protein binding site
attP1
recombination site for the Gateway BP reaction
570
801
protein binding site
attP2
recombination site for the Gateway BP reaction
2754
2985
rep_origin
ori
high-copy-number ColE1/pMB1/pBR322/pUC origin of replication
4112
4700
