Gene:
Gene Symbol:
Gene Name:
Original Clone ID:
ORFeome_LaBaer-011.0057
Keyword:
Codon optimized
Species:
Homo sapiens
Type:
cDNA
Vector Name:
pDONR221
Format:
FUSION
Source:
Center for Personalized Diagnostics
Description:
None
Comments:
None
Mutation / Discrepancy:
Yes / No
Publications:
None
Authors:
Center for Personalized Diagnostics
HsCD00821104
Price:
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AVAILABLE
No restriction
Special MTA: None
Special MTA: None
Insert sequence: 4134nts
Open reading frame: 1 to 4134
ATGTCACTTGAGCGCGAGCTACGCCAGCTGAGCAAGGCCAAAGCCAAAGCGCAGCGGGCC
GGACAGCGGCGAGAAGAAGCCGCGTTATGCCATCAACTCGGGGAGCTGCTGGCTGGTCAT
GGCCGCTACGCCGAGGCTCTTGAGCAGCACTGGCAGGAACTGCAGCTGCGAGAGCGCGCT
GACGACCCTCTGGGCTGTGCAGTGGCACACCGCAAGATCGGAGAGCGCCTGGCGGAGATG
GAGGACTACCCGGCTGCTCTGCAACACCAGCACCAGTACCTGGAGCTGGCACATTCCCTG
CGCAACCACACGGAGCTTCAGAGGGCCTGGGCCACCATCGGCCGCACCCACCTCGACATC
TATGACCACTGCCAGTCGAGGGATGCTTTACTGCAGGCACAGGCAGCTTTTGAGAAAAGC
TTGGCTATTGTGGATGAGGAGCTAGAGGGGACACTCGCACAGGGAGAGCTGAATGAGATG
CGGACCCGCCTCTATCTCAATCTCGGGCTGACCTTTGAGAGCCTCCAGCAGACAGCCCTT
TGCAACGATTACTTTAGAAAGAGCATCTTCCTTGCGGAGCAGAACCACCTTTACGAGGAC
CTATTCCGAGCTCGCTACAACCTCGGCACCATCCACTGGCGCGCGGGCCAGCACTCCCAG
GCTATGCGTTGCCTCGAGGGTGCCCGGGAGTGTGCTCACACCATGAGGAAACGGTTCATG
GAGAGCGAGTGCTGCGTGGTTATTGCCCAGGTGCTCCAAGACCTGGGCGACTTTTTGGCT
GCTAAGAGAGCTCTGAAAAAGGCTTACAGGTTGGGATCACAGAAGCCTGTGCAGAGGGCT
GCCATCTGTCAGAATCTCCAGCATGTCCTGGCAGTTGTCCGACTGCAGCAACAGCTGGAG
GAAGCTGAGGGCAGAGATCCTCAGGGTGCCATGGTCATCTGTGAGCAGCTAGGGGACCTT
TTCTCCAAGGCAGGAGACTTTCCCAGGGCAGCTGAGGCTTACCAGAAGCAGCTTCGTTTT
GCTGAACTGCTGGACAGACCGGGTGCTGAGCGGGCCATCATCCACGTGTCCCTGGCTACC
ACACTGGGGGACATGAAGGACCACCACGGAGCCGTGCGCCACTATGAGGAGGAACTCAGA
CTCCGCAGCGGCAACGTGCTGGAAGAGGCCAAGACATGGCTGAACATTGCACTTTCCCGC
GAAGAAGCTGGCGATGCCTACGAGTTGCTGGCTCCTTGCTTCCAGAAAGCGCTCAGTTGT
GCCCAGCAGGCGCAGCGTCCGCAGCTCCAAAGGCAGGTTTTGCAGCACCTCCATACCGTG
CAGCTCAGGCTTCAGCCCCAGGAGGCCCCTGAGACAGAAACCAGACTAAGGGAGCTCAGT
GTCGCTGAAGATGAAGACGAAGAAGAGGAGGCTGAGGAGGCCGCCGCCACAGCGGAGTCC
GAAGCTTTAGAGGCTGGCGAGGTGGAGCTCTCAGAGGGTGAGGACGATACCGACGGCCTG
ACCCCGCAACTCGAGGAGGACGAGGAACTTCAGGGCCATCTGGGCCGGCGGAAGGGGAGC
AAGTGGAACCGGCGAAACGACATGGGGGAAACCTTGCTGCACCGAGCCTGCATCGAGGGC
CAGTTGCGCCGCGTCCAGGACCTTGTGAGACAGGGCCACCCCCTTAACCCTCGGGATTAC
TGTGGCTGGACACCTCTCCACGAGGCTTGCAACTACGGGCATCTGGAAATTGTCCGCTTC
CTGCTCGACCACGGCGCCGCAGTGGACGACCCAGGGGGCCAAGGCTGCGAAGGCATCACC
CCCCTCCACGATGCCCTGAATTGTGGCCACTTTGAGGTGGCCGAGCTCCTCCTTGAACGG
GGCGCGTCCGTCACCCTCCGAACCCGAAAGGGACTGAGCCCGCTGGAGACGCTGCAGCAG
TGGGTGAAGCTGTACCGCAGGGACCTCGACCTGGAGACTCGGCAGAAGGCAAGAGCCATG
GAGATGCTGCTACAGGCTGCCGCCTCGGGCCAAGATCCCCACAGCTCACAAGCCTTCCAC
ACCCCAAGTAGCCTTCTGTTTGACCCCGAAACCTCCCCTCCTTTGAGTCCCTGCCCAGAG
CCACCCTCTAATAGCACTAGACTCCCCGAAGCCTCTCAGGCCCACGTCAGAGTCTCCCCA
GGTCAGGCTGCTCCCGCCATGGCCAGACCTAGGCGAAGCAGGCATGGCCCAGCTAGTAGC
AGTAGTAGCTCAGAAGGAGAGGACAGTGCAGGCCCCGCACGGCCGTCCCAGAAAAGACCT
CGGTGCTCCGCCACCGCACAAAGGGTGGCAGCTTGGACGCCTGGCCCTGCTAGCAACAGG
GAAGCAGCGACAGCCAGTACAAGCCGGGCTGCCTACCAAGCAGCCATCAGAGGTGTGGGC
AGTGCTCAGAGTCGGCTGGGCCCTGGCCCACCGAGGGGCCATAGTAAAGCCCTTGCCCCC
CAGGCTGCACTCATCCCGGAGGAGGAGTGTCTTGCCGGGGATTGGCTGGAACTGGACATG
CCCCTGACCCGAAGTCGCAGACCTCGCCCCAGGGGCACTGGAGACAATCGGCGCCCCAGT
AGTACCTCTGGGTCGGATAGTGAAGAGAGCCGGCCTCGTGCCCGAGCAAAGCAGGTCCGC
CTGACATGCATGCAGAGTTGCTCTGCGCCAGTTAACGCAGGCCCATCCTCCCTGGCCTCT
GAACCTCCAGGAAGCCCCAGCACCCCCAGAGTTTCAGAACCTAGTGGGGACAGCTCCGCT
GCAGGACAGCCTTTGGGTCCTGCCCCGCCTCCTCCCATTCGGGTTAGAGTTCAAGTTCAG
GATCATCTCTTCCTCATTCCTGTGCCCCACAGTAGTGACACCCACTCTGTGGCTTGGCTC
GCTGAGCAGGCGGCCCAGCGGTACTACCAGACCTGCGGGCTGTTGCCCAGACTCACCCTA
CGGAAAGAAGGCGCCCTGCTGGCACCACAAGACCTCATCCCTGATGTCCTCCAGAGTAAT
GACGAGGTGTTGGCTGAGGTGACTTCGTGGGACCTTCCCCCGTTGACCGACCGCTACCGC
AGAGCCTGCCAGAGCCTTGGACAAGGGGAACACCAACAGGTTCTGCAGGCCGTGGAGCTA
CAGGGACTGGGCCTCTCGTTCAGCGCTTGCTCCTTGGCGCTGGACCAGGCCCAACTTACA
CCCTTGCTCCGGGCCCTCAAGCTGCACACAGCACTGCGGGAGCTCCGCCTGGCAGGGAAC
CGTCTGGGGGATAAGTGTGTGGCTGAGCTGGTGGCCGCTCTTGGCACCATGCCCAGCCTG
GCTCTCCTTGACCTCTCCTCAAATCACCTCGGTCCCGAAGGCCTGCGACAGCTTGCCATG
GGCCTCCCAGGACAAGCCACTCTTCAGAGTTTGGAGGAGTTGGACTTAAGTATGAATCCC
CTGGGAGACGGCTGTGGCCAGTCTCTGGCCTCCCTCCTGCACGCTTGCCCCTTACTCTCT
ACCCTGCGGCTTCAGGCGTGTGGCTTCGGCCCCAGTTTCTTTCTGAGCCACCAGACAGCT
CTGGGTAGCGCCTTCCAAGATGCTGAGCACCTCAAGACTCTGTCCCTGTCCTACAACGCT
CTGGGAGCCCCTGCGCTGGCAAGGACCCTCCAGTCGCTCCCCGCCGGCACACTCTTGCAC
TTAGAGCTCAGCTCCGTCGCTGCCGGGAAGGGTGATTCGGACCTCATGGAGCCCGTGTTC
CGATACCTGGCTAAGGAAGGCTGTGCTCTAGCCCACCTGACCCTGTCTGCAAACCACCTG
GGTGACAAGGCAGTTAGGGACCTGTGTAGATGTCTCTCCCTCTGCCCCTCACTCATCTCA
CTGGATCTGTCTGCCAACCCTGAGATCAGCTGTGCTAGCTTGGAAGAGCTCCTGTCCACC
CTCCAAAAGCGCCCCCAGGGCCTTAGCTTCCTTGGCCTGTCTGGCTGCGCCGTCCAGGGT
CCCCTTGGACTCGGCCTGTGGGACAAGATAGCTGCGCAGTTGCGTGAACTGCAACTGTGC
AGCAGACGCCTTTGCGCTGAGGACCGAGACGCCCTGCGTCAGCTGCAACCCAGTCGGCCG
GGACCCGGGGAGTGCACACTGGACCACGGATCCAAGCTCTTCTTTCGGCGACTC
Protein sequence predicted based on nucleotide sequence
MSLERELRQLSKAKAKAQRAGQRREEAALCHQLGELLAGHGRYAEALEQHWQELQLRERA DDPLGCAVAHRKIGERLAEMEDYPAALQHQHQYLELAHSLRNHTELQRAWATIGRTHLDI YDHCQSRDALLQAQAAFEKSLAIVDEELEGTLAQGELNEMRTRLYLNLGLTFESLQQTAL CNDYFRKSIFLAEQNHLYEDLFRARYNLGTIHWRAGQHSQAMRCLEGARECAHTMRKRFM ESECCVVIAQVLQDLGDFLAAKRALKKAYRLGSQKPVQRAAICQNLQHVLAVVRLQQQLE EAEGRDPQGAMVICEQLGDLFSKAGDFPRAAEAYQKQLRFAELLDRPGAERAIIHVSLAT TLGDMKDHHGAVRHYEEELRLRSGNVLEEAKTWLNIALSREEAGDAYELLAPCFQKALSC AQQAQRPQLQRQVLQHLHTVQLRLQPQEAPETETRLRELSVAEDEDEEEEAEEAAATAES EALEAGEVELSEGEDDTDGLTPQLEEDEELQGHLGRRKGSKWNRRNDMGETLLHRACIEG QLRRVQDLVRQGHPLNPRDYCGWTPLHEACNYGHLEIVRFLLDHGAAVDDPGGQGCEGIT PLHDALNCGHFEVAELLLERGASVTLRTRKGLSPLETLQQWVKLYRRDLDLETRQKARAM EMLLQAAASGQDPHSSQAFHTPSSLLFDPETSPPLSPCPEPPSNSTRLPEASQAHVRVSP GQAAPAMARPRRSRHGPASSSSSSEGEDSAGPARPSQKRPRCSATAQRVAAWTPGPASNR EAATASTSRAAYQAAIRGVGSAQSRLGPGPPRGHSKALAPQAALIPEEECLAGDWLELDM PLTRSRRPRPRGTGDNRRPSSTSGSDSEESRPRARAKQVRLTCMQSCSAPVNAGPSSLAS EPPGSPSTPRVSEPSGDSSAAGQPLGPAPPPPIRVRVQVQDHLFLIPVPHSSDTHSVAWL AEQAAQRYYQTCGLLPRLTLRKEGALLAPQDLIPDVLQSNDEVLAEVTSWDLPPLTDRYR RACQSLGQGEHQQVLQAVELQGLGLSFSACSLALDQAQLTPLLRALKLHTALRELRLAGN RLGDKCVAELVAALGTMPSLALLDLSSNHLGPEGLRQLAMGLPGQATLQSLEELDLSMNP LGDGCGQSLASLLHACPLLSTLRLQACGFGPSFFLSHQTALGSAFQDAEHLKTLSLSYNA LGAPALARTLQSLPAGTLLHLELSSVAAGKGDSDLMEPVFRYLAKEGCALAHLTLSANHL GDKAVRDLCRCLSLCPSLISLDLSANPEISCASLEELLSTLQKRPQGLSFLGLSGCAVQG PLGLGLWDKIAAQLRELQLCSRRLCAEDRDALRQLQPSRPGPGECTLDHGSKLFFRRL
Coding Sequence Details
Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None
Recommended Growth Condition:
Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:
bacterial
Marker:
kanamycin
Bacterial Selection Condition:
50ug/mL kanamycin
Growth Condition:
Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:
Conditions for Gateway-type vectors in recombined (with insert) form and other kanamycin resistant vectors.
Protein Expression Results:
None
Recommended expression in:
Not Applicable
Vector Name:
pDONR221
Synonyms:
''
Description:
Gateway®, donor (entry), recombinational cloning clone, bacterial expression expression with rrnB T2 and rrnB T1 and M13 forward and attP1 and ccdB and CmR and cat_promoter-var002 and attP2 and T7 promoter and M13 reverse and KanR and ori; 50ug/mL of Kanamycin resistance in Pichia;
Comments:
The position of features were determined for the unrecombined (empty) form of the vector, which is described in detail on the Invitrogen website.
Size (bp):
4762
Parent Vector:
None
Properties:
Gateway, bacterial expression, donor (entry), recombinational cloning
Author Name:
Invitrogen
Publications:
None
Vector Map:
Vector Sequence:
Sequence:
Vector Features:
Type
Name
Description
Start
End
CDS
ccdB
CcdB, a bacterial toxin that poisons DNA gyrase
1197
1502
CDS
CmR
confers resistance to chloramphenicol
1847
2506
CDS
KanR
confers resistance to kanamycin in bacteria or G418 (Geneticin) in eukaryotes
3156
3965
Terminator
rrnB T2
transcription terminator T2 from the E. coli rrnB gene
268
295
Terminator
rrnB T1
transcription terminator T1 from the E. coli rrnB gene
387
473
primer_bind
M13 forward
common sequencing primer, one of multiple similar variants
537
553
primer_bind
M13 reverse
common sequencing primer, one of multiple similar variants
3027
3043
promoter
cat_promoter-var002
promoter of the E. coli cat gene encoding chloramphenicol acetyltransferase
2507
2609
promoter
T7 promoter
promoter for bacteriophage T7 RNA polymerase
3004
3022
protein binding site
attP1
recombination site for the Gateway BP reaction
570
801
protein binding site
attP2
recombination site for the Gateway BP reaction
2754
2985
rep_origin
ori
high-copy-number ColE1/pMB1/pBR322/pUC origin of replication
4112
4700
