Gene:
Gene Symbol:
Gene Name:
Original Clone ID:
None
Keyword:
None
Species:
Homo sapiens
Type:
cDNA
Vector Name:
pDONR221
Format:
FUSION
Source:
Center for Personalized Diagnostics
Description:
None
Comments:
None
Mutation / Discrepancy:
No / No
Publications:
None
Authors:
Center for Personalized Diagnostics
HsCD00829322
Price:
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AVAILABLE
No restriction
Special MTA: None
Special MTA: None
Insert sequence: 3324nts
Open reading frame: 1 to 3324
ATGGGAAGCAAAGGTGTCTACCAGTACCACTGGCAAAGCCACAATGTCAAGCACAGTGGT
GTGGACGACATGGTGCTACTGTCCAAGATCACAGAGAACTCCATCGTGGAGAATCTGAAG
AAGAGATACATGGATGACTACATTTTTACATATATAGGATCTGTATTAATCTCAGTCAAC
CCTTTCAAGCAGATGCCATATTTTGGGGAAAAGGAAATTGAAATGTACCAAGGAGCGGCA
CAGTATGAAAACCCACCACATATCTATGCCCTTGCAGATAATATGTACAGAAACATGATC
ATTGACAGAGAGAACCAGTGCGTCATTATCAGTGGTGAAAGTGGTGCTGGAAAAACAGTG
GCTGCCAAATATATCATGAGCTACATCTCCAGAGTGTCTGGAGGAGGGACCAAAGTCCAG
CACGTGAAGGACATTATCCTGCAGTCCAACCCGCTGCTGGAGGCCTTCGGGAACGCCAAG
ACCGTCCGGAACAACAACTCCAGCCGATTTGGAAAATACTTTGAAATCCAGTTCAGTCCA
GGTGGGGAACCAGATGGTGGAAAGATCTCCAACTTCCTTCTGGAAAAATCTAGGGTGGTG
ATGAGGAACCCAGGAGAGCGGAGTTTTCACATATTTTACCAGCTCATCGAGGGCGCCTCT
GCAGAGCAGAAACACAGCCTTGGCATCACCAGCATGGACTATTATTACTACCTGAGCCTC
TCGGGCTCATACAAGGTTGATGACATTGACGACAGGCGGGAGTTTCAGGAAACTCTGCAC
GCCATGAATGTGATTGGGATCTTTGCAGAAGAGCAAACGCTGGTGTTGCAGATAGTGGCG
GGTATTCTCCACCTGGGAAACATCAGCTTCAAAGAAGTTGGCAACTACGCGGCTGTGGAG
AGTGAAGAGTTTTTAGCTTTTCCTGCATATCTGCTAGGGATAAACCAGGACCGGTTGAAA
GAAAAGCTAACAAGCCGGCAGATGGATAGCAAGTGGGGAGGCAAATCCGAATCCATCCAC
GTGACCCTCAACGTAGAGCAGGCCTGTTACACCCGGGATGCGCTCGCCAAGGCCCTGCAC
GCCCGGGTCTTTGATTTCTTGGTAGATTCCATCAATAAAGCCATGGAGAAAGACCATGAA
GAATACAACATTGGCGTCCTAGACATCTATGGCTTTGAAATATTCCAGAAAAATGGCTTT
GAACAGTTTTGTATCAATTTTGTTAATGAAAAACTGCAGCAGATTTTTATTGAACTGACA
TTAAAGGCAGAACAGGAAGAATATGTTCAAGAGGGAATAAGATGGACACCCATTGAGTAC
TTTAATAATAAAATCGTATGTGACCTCATAGAGAACAAAGTGAACCCTCCTGGCATCATG
AGCATCCTGGATGACGTGTGCGCCACGATGCATGCGGTGGGTGAGGGGGCAGATCAGACG
CTGCTCCAGAAACTTCAGATGCAGATTGGGAGTCATGAGCACTTCAACAGTTGGAACCAA
GGCTTCATCATTCATCATTATGCTGGGAAGGTATCCTATGACATGGATGGCTTTTGTGAA
AGGAACCGGGATGTGCTTTTTATGGATCTCATCGAGCTTATGCAGAGCAGCGAGCTGCCT
TTCATAAAGTCTTTATTTCCGGAAAATCTGCAGGCTGACAAGAAAGGGCGCCCAACTACT
GCCGGAAGCAAAATAAAGAAACAAGCCAATGACCTTGTGAGCACCCTGATGAAATGTACG
CCCCACTACATTCGCTGCATCAAGCCAAACGAAACCAAGAAGCCCAGAGACTGGGAGGAA
AGCAGGGTAAAGCATCAAGTCGAATATTTGGGTCTGAAAGAGAACATTCGAGTGAGAAGA
GCTGGCTATGCCTATCGGCGCATCTTCCAAAAATTCCTACAGAGGTATGCCATTCTGACC
AAAGCCACCTGGCCTTCTTGGCAGGGAGAGGAGAAGCAAGGCGTCCTGCACCTGCTGCAG
TCGGTCAACATGGACAGCGACCAGTTCCAGCTGGGGAGGAGTAAAGTGTTCATCAAAGCC
CCCGAGTCTCTATTTCTTTTAGAAGAGATGAGAGAGAGAAAGTATGATGGGTATGCTCGA
GTGATACAGAAATCATGGAGGAAATTCGTGGCCCGGAAGAAATACGTTCAAATGAGAGAA
GAAGCCTCAGACCTCTTATTGAACAAGAAGGAGAGAAGGAGAAACAGTATTAACAGGAAC
TTTATAGGGGATTATATTGGGATGGAAGAGCACCCAGAACTCCAGCAGTTCGTGGGCAAG
AGGGAGAAGATTGATTTCGCAGACACAGTCACCAAGTATGACAGGAGGTTCAAGGGTGTA
AAGCGAGACCTGCTCCTTACCCCAAAGTGCTTGTACTTAATCGGACGAGAAAAAGTCAAA
CAGGGCCCAGACAAGGGCCTGGTGAAAGAAGTCCTGAAGCGGAAAATCGAGATAGAACGG
ATCTTGTCTGTGTCCCTCAGTACTATGCAGGATGACATTTTTATTCTCCATGAGCAAGAG
TATGACAGTTTGCTTGAATCTGTCTTCAAAACTGAATTCCTAAGCCTCTTAGCAAAGCGT
TACGAGGAGAAGACCCAGAAGCAACTACCTCTGAAATTCAGCAATACGCTTGAACTGAAG
TTGAAAAAGGAAAACTGGGGCCCCTGGAGTGCAGGGGGCTCCCGGCAAGTGCAGTTCCAC
CAAGGGTTTGGGGACCTGGCTGTCCTCAAGCCCAGTAACAAAGTGCTGCAGGTCAGCATC
GGACCTGGACTGCCCAAGAACTCCCGTCCTACCAGAAGGAACACTACCCAAAATACAGGT
TATTCCAGTGGGACTCAAAATGCCAACTACCCAGTGAGAGCTGCCCCTCCTCCCCCAGGA
TACCATCAGAACGGAGTCATCAGAAACCAGTATGTGCCATATCCCCATGCTCCTGGAAGC
CAGAGGTCCAATCAGAAAAGCCTGTACACCTCCATGGCCCGCCCGCCCTTGCCTCGGCAG
CAGTCTACCAGTTCAGACCGAGTGTCACAGACGCCAGAGAGCCTGGATTTCCTCAAGGTC
CCGGACCAGGGAGCTGCAGGGGTCAGGAGACAAACAACCAGTCGGCCTCCCCCAGCAGGG
GGCAGACCCAAGCCCCAGCCCAAGCCCAAGCCTCAGGTGCCACAGTGCAAGGCTTTGTAT
GCCTATGACGCTCAGGACACAGACGAACTCAGCTTTAATGCCAATGACATTATTGATATT
ATCAAAGAAGATCCTTCTGGCTGGTGGACGGGTCGACTACGAGGCAAGCAGGGCCTGTTC
CCCAACAACTATGTGACCAAGATCTTG
Protein sequence predicted based on nucleotide sequence
MGSKGVYQYHWQSHNVKHSGVDDMVLLSKITENSIVENLKKRYMDDYIFTYIGSVLISVN PFKQMPYFGEKEIEMYQGAAQYENPPHIYALADNMYRNMIIDRENQCVIISGESGAGKTV AAKYIMSYISRVSGGGTKVQHVKDIILQSNPLLEAFGNAKTVRNNNSSRFGKYFEIQFSP GGEPDGGKISNFLLEKSRVVMRNPGERSFHIFYQLIEGASAEQKHSLGITSMDYYYYLSL SGSYKVDDIDDRREFQETLHAMNVIGIFAEEQTLVLQIVAGILHLGNISFKEVGNYAAVE SEEFLAFPAYLLGINQDRLKEKLTSRQMDSKWGGKSESIHVTLNVEQACYTRDALAKALH ARVFDFLVDSINKAMEKDHEEYNIGVLDIYGFEIFQKNGFEQFCINFVNEKLQQIFIELT LKAEQEEYVQEGIRWTPIEYFNNKIVCDLIENKVNPPGIMSILDDVCATMHAVGEGADQT LLQKLQMQIGSHEHFNSWNQGFIIHHYAGKVSYDMDGFCERNRDVLFMDLIELMQSSELP FIKSLFPENLQADKKGRPTTAGSKIKKQANDLVSTLMKCTPHYIRCIKPNETKKPRDWEE SRVKHQVEYLGLKENIRVRRAGYAYRRIFQKFLQRYAILTKATWPSWQGEEKQGVLHLLQ SVNMDSDQFQLGRSKVFIKAPESLFLLEEMRERKYDGYARVIQKSWRKFVARKKYVQMRE EASDLLLNKKERRRNSINRNFIGDYIGMEEHPELQQFVGKREKIDFADTVTKYDRRFKGV KRDLLLTPKCLYLIGREKVKQGPDKGLVKEVLKRKIEIERILSVSLSTMQDDIFILHEQE YDSLLESVFKTEFLSLLAKRYEEKTQKQLPLKFSNTLELKLKKENWGPWSAGGSRQVQFH QGFGDLAVLKPSNKVLQVSIGPGLPKNSRPTRRNTTQNTGYSSGTQNANYPVRAAPPPPG YHQNGVIRNQYVPYPHAPGSQRSNQKSLYTSMARPPLPRQQSTSSDRVSQTPESLDFLKV PDQGAAGVRRQTTSRPPPAGGRPKPQPKPKPQVPQCKALYAYDAQDTDELSFNANDIIDI IKEDPSGWWTGRLRGKQGLFPNNYVTKI
Coding Sequence Details
Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None
Recommended Growth Condition:
Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:
bacterial
Marker:
kanamycin
Bacterial Selection Condition:
50ug/mL kanamycin
Growth Condition:
Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:
Conditions for Gateway-type vectors in recombined (with insert) form and other kanamycin resistant vectors.
Protein Expression Results:
None
Recommended expression in:
Not Applicable
Vector Name:
pDONR221
Synonyms:
''
Description:
Gateway®, donor (entry), recombinational cloning clone, bacterial expression expression with rrnB T2 and rrnB T1 and M13 forward and attP1 and ccdB and CmR and cat_promoter-var002 and attP2 and T7 promoter and M13 reverse and KanR and ori; 50ug/mL of Kanamycin resistance in Pichia;
Comments:
The position of features were determined for the unrecombined (empty) form of the vector, which is described in detail on the Invitrogen website.
Size (bp):
4762
Parent Vector:
None
Properties:
Gateway, bacterial expression, donor (entry), recombinational cloning
Author Name:
Invitrogen
Publications:
None
Vector Map:
Vector Sequence:
Sequence:
Vector Features:
Type
Name
Description
Start
End
CDS
ccdB
CcdB, a bacterial toxin that poisons DNA gyrase
1197
1502
CDS
CmR
confers resistance to chloramphenicol
1847
2506
CDS
KanR
confers resistance to kanamycin in bacteria or G418 (Geneticin) in eukaryotes
3156
3965
Terminator
rrnB T2
transcription terminator T2 from the E. coli rrnB gene
268
295
Terminator
rrnB T1
transcription terminator T1 from the E. coli rrnB gene
387
473
primer_bind
M13 forward
common sequencing primer, one of multiple similar variants
537
553
primer_bind
M13 reverse
common sequencing primer, one of multiple similar variants
3027
3043
promoter
cat_promoter-var002
promoter of the E. coli cat gene encoding chloramphenicol acetyltransferase
2507
2609
promoter
T7 promoter
promoter for bacteriophage T7 RNA polymerase
3004
3022
protein binding site
attP1
recombination site for the Gateway BP reaction
570
801
protein binding site
attP2
recombination site for the Gateway BP reaction
2754
2985
rep_origin
ori
high-copy-number ColE1/pMB1/pBR322/pUC origin of replication
4112
4700
