Gene:
Gene Symbol:
Gene Name:
Original Clone ID:
None
Keyword:
None
Species:
Homo sapiens
Type:
cDNA
Vector Name:
pJFT7_nHalo_DC(r4)
Format:
FUSION
Source:
Center for Personalized Diagnostics
Description:
None
Comments:
None
Mutation / Discrepancy:
No / No
Publications:
None
Authors:
Center for Personalized Diagnostics
HsCD00839997
Price:
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AVAILABLE
No restriction
Special MTA: HALO
Special MTA: HALO
Insert sequence: 3738nts
Open reading frame: 1 to 3738
ATGGTTCCCGCTGGGGATCAAGACCGCGCTCCACACAGGGGAAAGCCGGCCCAGGCTGGG
GCTCGCACCTCTAGAGCATCTAGGGCTCTTCGATCTTGGAGGCGCTCTCAGGCTGCGCGA
GCTACAGTCACCCACCCACGTGGGGGACACGACCGTGGGAGTCACGGGGGATACCGTGAG
GGTCATAGAGGGTGTAGGAGAGATCCACAGTGGGCTTCCGCGGGGCCTCCACCCTTGAGC
TTCACAGAGGAAGTGAAATTTGAGCTGCGCGCCCTGAAGGACTGGGACTTCAAAATGAGC
GTCCCTGACTACATGCAGTGTGCTGAGGACCACCAGACGCTGCTCGTGGTGGTCCAGCCT
GTGGGCATCGTGTCCGAGGAGAACTTCTTCCGCATCTATAAGAGAATTTGCTCTGTGAGT
CAGATCAGCGTGAGGGACTCCCAGCGAGTCCTCTACATCCGCTACAGGCACCACTACCCA
CCCGAGAACAACGAGTGGGGTGACTTCCAGACCCACCGCAAAGTCGTGGGCCTCATCACC
ATCACAGACTGCTTCTCGGCCAAGGACTGGCCACAGACCTTTGAGAAGTTCCACGTCCAG
AAGGAGATCTACGGCTCCACACTGTATGACTCCCGGCTCTTTGTGTTCGGGCTTCAGGGG
GAGATCGTCGAGCAGCCGCGGACCGACGTGGCTTTCTACCCCAACTACGAGGACTGCCAG
ACGGTGGAGAAGAGAATCGAGGACTTCATCGAGTCCCTGTTCATCGTGCTGGAGTCCAAG
CGTCTGGATAGAGCCACAGACAAGTCTGGGGATAAGATCCCCCTTCTCTGTGTCCCGTTT
GAGAAAAAGGACTTTGTAGGACTGGACACAGACAGCAGACATTACAAGAAGCGGTGCCAA
GGCCGCATGCGGAAGCACGTGGGGGACCTGTGCCTGCAGGCAGGGATGCTGCAGGACTCT
CTGGTGCATTACCACATGTCGGTGGAGCTGCTGCGTTCTGTGAATGACTTTCTGTGGCTG
GGAGCTGCCCTGGAAGGATTGTGTTCAGCTTCTGTCATCTATCACTACCCTGGTGGAACT
GGTGGGAAGAGCGGAGCTCGGAGGTTCCAGGGCAGCACTCTTCCTGCTGAAGCCGCCAAT
AGACACCGGCCAGGGGCACAGGAAGTTCTCATTGATCCAGGTGCCCTCACCACCAATGGC
ATCAACCCTGACACAAGTACTGAGATCGGACGTGCTAAGAACTGCCTCAGCCCTGAAGAC
ATAATTGACAAGTATAAAGAGGCGATTTCCTATTACAGCAAGTATAAGAATGCGGGAGTG
ATTGAGTTGGAAGCCTGCATCAAGGCTGTGCGGGTCCTTGCAATTCAGAAAAGGAGCATG
GAAGCATCAGAATTTCTTCAGAATGCAGTGTACATTAACCTACGACAGCTTTCTGAGGAA
GAGAAAATTCAGCGCTACAGCATCCTCTCCGAGCTTTATGAGCTGATCGGCTTCCATCGC
AAGTCTGCGTTCTTCAAGCGCGTGGCCGCCATGCAGTGCGTGGCCCCAAGCATCGCGGAG
CCTGGGTGGAGGGCCTGCTACAAACTTCTCCTGGAAACGCTGCCCGGCTACAGTCTGTCG
CTGGATCCCAAAGATTTCAGCAGAGGCACGCACAGAGGCTGGGCTGCCGTCCAGATGCGT
TTGCTCCATGAATTGGTCTACGCCTCCCGAAGAATGGGGAACCCTGCCCTCTCTGTCAGA
CACCTGTCCTTCCTTCTACAGACCATGCTCGACTTCTTGTCGGATCAGGAAAAGAAAGAT
GTGGCCCAAAGCCTAGAGAACTATACGTCCAAGTGTCCTGGGACCATGGAGCCTATCGCC
CTCCCTGGCGGCCTCACCCTACCACCGGTGCCCTTCACCAAGCTTCCCATCGTCAGGCAT
GTGAAACTATTGAACCTTCCTGCTAGCCTCCGGCCACACAAAATGAAAAGCTTGCTGGGT
CAGAACGTGTCCACCAAAAGTCCTTTCATCTATTCCCCAATTATCGCACACAACCGTGGA
GAAGAGCGGAACAAGAAAATAGATTTCCAGTGGGTTCAAGGAGATGTGTGTGAAGTTCAG
CTGATGGTATATAACCCAATGCCGTTTGAACTTCGAGTTGAAAACATGGGGCTCCTCACT
AGCGGAGTGGAGTTCGAGTCTCTGCCTGCGGCGCTTTCTCTTCCGGCTGAATCTGGTCTG
TACCCCGTGACGCTCGTCGGCGTCCCGCAGACGACTGGAACGATTACTGTGAACGGTTAC
CATACCACGGTCTTCGGTGTGTTCAGTGACTGTTTGCTGGATAACCTGCCGGGAATAAAA
ACCAGCGGCTCCACAGTGGAAGTCATTCCCGCGTTGCCAAGACTGCAGATCAGCACCTCT
CTGCCCAGATCTGCACATTCATTGCAACCTTCTTCTGGTGATGAAATATCTACTAATGTA
TCTGTCCAGCTGTACAATGGGGAAAGTCAGCAACTAATCATTAAATTGGAAAATATTGGA
ATGGAACCATTGGAGAAACTGGAGGTGACCTCGAAAGTTCTCACCACTAAAGAAAAATTG
TATGGAGACTTCTTGAGTTGGAAGCTAGAGGAAACCCTTGCCCAGTTCCCTTTGCAGCCT
GGGAAGGTGGCCACGTTCACAATCAACATCAAAGTGAAGCTCGATTTCTCCTGCCAGGAA
AATCTCCTGCAGGATCTCAGTGATGACGGAATCAGTGTGAGTGGCTTTCCCCTGTCTAGT
CCTTTTCGGCAGGTCGTTAGGCCCCGAGTGGAGGGCAAACCCGTGAACCCCCCCGAGAGC
AACAAAGCAGGCGACTACAGCCACGTGAAGACCCTGGAAGCTGTCCTGAATTTCAAATAC
TCTGGAGGCCCGGGCCACACTGAAGGATATTACAGGAATCTCTCCCTGGGGCTGCATGTA
GAAGTCGAGCCGTCTGTGTTTTTCACCCGAGTCAGCACCCTCCCAGCAACCAGTACCAGG
CAGTGTCATCTGCTCCTGGATGTCTTCAACTCTACCGAGCATGAGCTGACCGTCAGCACC
AGGAGCAGCGAGGCCCTCATCCTGCACGCCGGTGAGTGCCAGCGAATGGCTATTCAAGTG
GACAAGTTCAACTTTGAGAGTTTCCCGGAGTCCCCTGGGGAGAAGGGGCAATTTGCAAAC
CCCAAGCAGCTGGAGGAAGAGCGGCGGGAAGCCCGAGGCCTGGAGATCCACAGTAAGCTG
GGCATCTGCTGGAGGATCCCCTCCCTGAAGCGCAGTGGCGAGGCGAGTGTGGAAGGCCTC
CTCAACCAGCTCGTCCTGGAGCACCTCCAACTGGCGCCTCTTCAGTGGGATGTGCTGGTG
GACGGACAACCATGTGACCGCGAAGCTGTGGCAGCCTGTCAAGTGGGCGACCCCGTGCGC
CTGGAGGTGCGACTGACTAATCGGAGCCCGCGAAGCGTGGGGCCATTTGCCCTCACTGTG
GTCCCCTTCCAGGACCACCAGAACGGCGTGCACAACTACGACCTTCACGACACCGTCTCC
TTCGTGGGCTCCAGCACCTTCTACCTCGACGCGGTGCAACCGTCTGGCCAGTCGGCCTGC
CTCGGGGCCCTCCTCTTCCTCTACACGGGAGACTTCTTCCTCCACATCCGGTTCCACGAG
GACAGCACCAGCAAGGAGCTGCCACCCTCTTGGTTCTGCCTGCCCAGTGTGCACGTGTGT
GCCCTGGAGGCGCAGGCC
Protein sequence predicted based on nucleotide sequence
MVPAGDQDRAPHRGKPAQAGARTSRASRALRSWRRSQAARATVTHPRGGHDRGSHGGYRE GHRGCRRDPQWASAGPPPLSFTEEVKFELRALKDWDFKMSVPDYMQCAEDHQTLLVVVQP VGIVSEENFFRIYKRICSVSQISVRDSQRVLYIRYRHHYPPENNEWGDFQTHRKVVGLIT ITDCFSAKDWPQTFEKFHVQKEIYGSTLYDSRLFVFGLQGEIVEQPRTDVAFYPNYEDCQ TVEKRIEDFIESLFIVLESKRLDRATDKSGDKIPLLCVPFEKKDFVGLDTDSRHYKKRCQ GRMRKHVGDLCLQAGMLQDSLVHYHMSVELLRSVNDFLWLGAALEGLCSASVIYHYPGGT GGKSGARRFQGSTLPAEAANRHRPGAQEVLIDPGALTTNGINPDTSTEIGRAKNCLSPED IIDKYKEAISYYSKYKNAGVIELEACIKAVRVLAIQKRSMEASEFLQNAVYINLRQLSEE EKIQRYSILSELYELIGFHRKSAFFKRVAAMQCVAPSIAEPGWRACYKLLLETLPGYSLS LDPKDFSRGTHRGWAAVQMRLLHELVYASRRMGNPALSVRHLSFLLQTMLDFLSDQEKKD VAQSLENYTSKCPGTMEPIALPGGLTLPPVPFTKLPIVRHVKLLNLPASLRPHKMKSLLG QNVSTKSPFIYSPIIAHNRGEERNKKIDFQWVQGDVCEVQLMVYNPMPFELRVENMGLLT SGVEFESLPAALSLPAESGLYPVTLVGVPQTTGTITVNGYHTTVFGVFSDCLLDNLPGIK TSGSTVEVIPALPRLQISTSLPRSAHSLQPSSGDEISTNVSVQLYNGESQQLIIKLENIG MEPLEKLEVTSKVLTTKEKLYGDFLSWKLEETLAQFPLQPGKVATFTINIKVKLDFSCQE NLLQDLSDDGISVSGFPLSSPFRQVVRPRVEGKPVNPPESNKAGDYSHVKTLEAVLNFKY SGGPGHTEGYYRNLSLGLHVEVEPSVFFTRVSTLPATSTRQCHLLLDVFNSTEHELTVST RSSEALILHAGECQRMAIQVDKFNFESFPESPGEKGQFANPKQLEEERREARGLEIHSKL GICWRIPSLKRSGEASVEGLLNQLVLEHLQLAPLQWDVLVDGQPCDREAVAACQVGDPVR LEVRLTNRSPRSVGPFALTVVPFQDHQNGVHNYDLHDTVSFVGSSTFYLDAVQPSGQSAC LGALLFLYTGDFFLHIRFHEDSTSKELPPSWFCLPSVHVCALEAQA
Coding Sequence Details
Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None
Recommended Growth Condition:
Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:
bacterial
Marker:
ampicillin
Bacterial Selection Condition:
100 ug/mL ampicillin
Growth Condition:
Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:
Commonly used conditions for ampicillin resistant plasmid clones.
Protein Expression Results:
None
Recommended expression in:
Not Applicable
Vector Name:
pJFT7_nHalo_DC(r4)
Synonyms:
''
Description:
In vitro expression vector with a T7 promoter and N-terminal TEV-cleavable Halo tag; ampicillin resistance in bacteria; Gateway or Flexi cloning compatible
Comments:
One in a series of pJFT7 vectors made by J. Saul for IVTT protein expression at CPD. This vector has been modified to improve sequencing the insert with a reverse primer.
Size (bp):
6140
Parent Vector:
None
Properties:
Gateway, acceptor (destination), in vitro transcription, recombinational cloning, with tag/fusion/marker
Author Name:
Arizona State University
Joshua LaBaer
Ji Qiu
Justin Saul
Fernanda Festa
Andrea Throop
Center for Personalized Diagnostics
Joshua LaBaer
Ji Qiu
Justin Saul
Fernanda Festa
Andrea Throop
Center for Personalized Diagnostics
Publications:
None
Vector Map:
Vector Sequence:
Sequence:
Vector Features:
Type
Name
Description
Start
End
bacterial origin
ColE
ColE1 origin
3425
4107
death cassette
ccdB
ccdB death cassette (removed in plasmids containing a gene insert)
2785
2994
enhancer
CITE
CITE enhancer
17
515
protease cleavage site
TEV
TEV protease cleavage site
1422
1442
recombination site
attR1
attR1 recombination site
1458
1474
recombination site
attR2
recombination site
3145
3160
selectable marker
AmpR
ampicillin resistance
4205
4864
selectable marker
CmR
chloramphenicol resistance (removed in clones containing a gene insert)
1691
2347
ssDNA origin
f1
f1 origin
5633
5939
tag
HALO
N-terminal HALO tag
522
1409
