Gene:
Gene Symbol:
Gene Name:
Original Clone ID:
None
Keyword:
None
Species:
Homo sapiens
Type:
cDNA
Vector Name:
pJFT7_nHalo_DC(r4)
Format:
FUSION
Source:
Center for Personalized Diagnostics
Description:
None
Comments:
None
Mutation / Discrepancy:
No / No
Publications:
None
Authors:
Center for Personalized Diagnostics
HsCD00840351
Price:
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AVAILABLE
No restriction
Special MTA: HALO
Special MTA: HALO
Insert sequence: 3309nts
Open reading frame: 1 to 3309
ATGGCTCCCGCCTGCCAGATCCTCCGCTGGGCCCTCGCCCTGGGGCTGGGCCTCATGTTC
GAGGTCACGCACGCCTTCCGGTCCCAAGATGAGTTCCTGTCCAGTCTGGAGAGCTATGAG
ATCGCCTTCCCTACCCGCGTAGACCACAACGGAGCACTGCTGGCCTTTTCTCCACCTCCT
CCCCGGAGGCAGCGCCGCGGCACGGGGGCCACAGCCGAATCCCGCCTCTTCTACAAAGTG
GCCTCGCCCTCCACACACTTCCTGCTGAACCTCACACGCAGCTCCCGTCTACTGGCAGGG
CACGTCTCAGTGGAGTACTGGACACGGGAGGGCCTGGCCTGGCAGAGGGCCGCCCGGCCC
CACTGCCTGTACGCTGGTCACCTCCAAGGACAGGCCAGCAGCTCCCATGTGGCCATCTCG
ACCTGTGGAGGCCTGCACGGCCTCATCGTGGCAGACGAGGAAGAGTACCTGATTGAGCCC
CTGCACGGTGGGCCCAAGGGTTCTCGCAGCCCGGAGGAAAGTGGACCACATGTGGTGTAC
AAGCGCTCCTCTCTGCGTCACCCCCACCTGGACACAGCCTGTGGCGTGAGAGATGAGAAA
CCGTGGAAAGGGCGGCCATGGTGGCTGCGGACCTTGAAGCCACCGCCTGCCAGGCCTTTG
GGGAATGAAACAGAGCGTGGCCAGCCAGGACTGAAGCGATCGGTCAGCCGGGAGCGCTAC
GTGGAAACCCTGGTGGTGGCTGACAAGATGATGGTGGCCTATCACGGGCGCCGGGATGTG
GAGCAGTATGTCCTCGCCATCATGAACATTGTTGCCAAACTTTTCCAGGACTCCAGTCTG
GGAAGCACCGTTAACATCCTCGTAACTCGCCTCATCCTGCTCACGGAGGACCAGCCCACA
CTGGAGATCACCCACCATGCCGGGAAGTCCCTGGACAGCTTCTGTAAGTGGCAGAAATCC
ATCGTGAACCACAGCGGCCATGGCAATGCTATTCCAGAGAACGGTGTGGCTAACCATGAC
ACCGCAGTGCTCATCACCCGCTATGACATCTGCATCTACAAGAACAAACCCTGCGGCACA
CTAGGCCTCGCTCCGGTGGGCGGAATGTGTGAGCGCGAGAGAAGCTGCAGCGTCAATGAG
GACATTGGCCTCGCCACAGCGTTCACCATTGCCCACGAGATCGGGCACACATTCGGCATG
AACCATGACGGCGTGGGAAACAGCTGTGGGGCCCGTGGACAGGACCCAGCCAAGCTCATG
GCTGCCCACATTACCATGAAGACCAACCCATTCGTGTGGTCATCCTGCAGCCGTGACTAC
ATCACCAGTTTTCTAGACTCGGGCCTGGGGCTCTGCCTGAACAACCGGCCCCCCAGACAG
GACTTTGTGTACCCCACAGTGGCACCGGGCCAAGCCTACGATGCAGATGAGCAATGCCGC
TTTCAGCATGGAGTCAAATCGCGTCAGTGTAAATACGGGGAGGTCTGCAGCGAGCTGTGG
TGTCTGAGCAAGTCCAACCGGTGCATCACCAACAGTATCCCGGCCGCCGAGGGCACGCTG
TGCCAGACGCACACCATCGACAAGGGGTGGTGCTACAAACGGGTCTGTGTCCCCTTTGGA
TCGCGCCCAGAGGGTGTGGACGGAGCCTGGGGGCCGTGGACTCCATGGGGAGACTGCAGC
AGGACCTGTGGCGGCGGCGTGTCCTCTTCTAGCCGTCACTGCGACAGCCCCAGGCCAACC
ATCGGGGGCAAGTACTGTCTGGGTGAGAGAAGGCGGCACCGCTCCTGCAACACGGATGAC
TGTCCCCCCGGCTCCCAGGACTTCAGAGAAGTGCAGTGTTCTGAATTTGACAGCATCCCT
TTCCGTGGGAAATTCTACAAGTGGAAAACGTACCGGGGAGGGGGCGTGAAGGCCTGCTCG
CTCACGTGCCTAGCGGAAGGATTCAACTTCTACACGGAGAGGGCGGCAGCCGTGGTGGAC
GGGACACCTTGCCGTCCAGACACGGTGGACATTTGCGTCAGCGGCGAATGCAAGCACGTG
GGCTGCGACAGAGTCCTGGGCTCCGACCTGCGGGAGGACAAGTGCCGAGTGTGTGGCGGT
GACGGCAGTGCCTGCGAAACCATCGAGGGCGTCTTCAGCCCAGCCTCACCTGGGGCCGGG
TACGAGGATGTGGTCTGGATTCCCAAAGGCTCCGTCCACATCTTCATCCAGGATCTGAAC
CTCTCTCTCAGCCACTTGGCCCTGAAGGGCGACCAGGAGTCCCTGCTGCTGGAGGGGCTG
CCTGGGACCCCTCAGCCCCACCGTCTGCCTCTGGCTGGGACAACCTTTCAACTGCGACAG
GGGCCAGACCAGGTCCAGAGCCTCGAAGCCCTGGGACCGATTAATGCATCTCTCATCGTC
ATGGTGCTCGCCCGGACCGAGCTGCCTGCCCTGCGCTACCGCTTCAATGCCCCCATCGCC
CGTGACTCGCTGCCCCCCTACTCCTGGCACTATGCGCCCTGGACCAAGTGCTCTGCCCAG
TGTGCAGGCGGTAGCCAGGTGCAGGCGGTGGAGTGCCGAAACCAGCTGGACAGCTCCGCG
GTCGCCCCCCACTACTGCAGTGCCCACAGCAAGCTGCCCAAAAGGCAGCGCGCCTGCAAC
ACGGAGCCTTGCCCTCCAGACTGGGTTGTAGGCAACTGGTCGCTCTGCAGCCGCAGCTGC
GATGCAGGCGTGCGCAGTCGCTCGGTCGTGTGCCAGCGCCGAGTCTCTGCCGCGGAGGAG
AAGGCTCTGGACGACAGTGCATGCCCGCAGCCTCGCCCACCTGTACTGGAGGCCTGCCAT
GGACCCACTTGCCCTCCGGAGTGGGCGGCCCTCGACTGGTCTGAGTGCACACCCAGTTGC
GGGCCGGGACTCCGCCACCGAGTCGTCCTTTGCAAGAGCGCAGACCACCGAGCCACACTG
CCTCCGGCGCACTGCTCACCCGCAGCTAAGCCACCGGCTACCATGCGCTGTAATTTGCGC
CGCTGCCCCCCGGCCCGCTGGGTGGCTGGAGAGTGGGGTGAATGCTCTGCACAATGCGGC
GTCGGCCAGCGGCAGCGTTCTGTTCGCTGCACAAGCCACACAGGCCAGGCGTCGCACGAA
TGCACGGAAGCCCTGCGGCCGCCCACCACGCAGCAGTGTGAAGCCAAGTGCGACAGCCCA
ACCCCCGGGGACGGCCCTGAAGAGTGCAAGGATGTCAACAAGGTCGCCTACTGCCCCCTG
GTGCTCAAATTTCAGTTCTGCAGCCGAGCCTACTTCCGCCAGATGTGCTGCAAAACCTGC
CATGGCCAC
Protein sequence predicted based on nucleotide sequence
MAPACQILRWALALGLGLMFEVTHAFRSQDEFLSSLESYEIAFPTRVDHNGALLAFSPPP PRRQRRGTGATAESRLFYKVASPSTHFLLNLTRSSRLLAGHVSVEYWTREGLAWQRAARP HCLYAGHLQGQASSSHVAISTCGGLHGLIVADEEEYLIEPLHGGPKGSRSPEESGPHVVY KRSSLRHPHLDTACGVRDEKPWKGRPWWLRTLKPPPARPLGNETERGQPGLKRSVSRERY VETLVVADKMMVAYHGRRDVEQYVLAIMNIVAKLFQDSSLGSTVNILVTRLILLTEDQPT LEITHHAGKSLDSFCKWQKSIVNHSGHGNAIPENGVANHDTAVLITRYDICIYKNKPCGT LGLAPVGGMCERERSCSVNEDIGLATAFTIAHEIGHTFGMNHDGVGNSCGARGQDPAKLM AAHITMKTNPFVWSSCSRDYITSFLDSGLGLCLNNRPPRQDFVYPTVAPGQAYDADEQCR FQHGVKSRQCKYGEVCSELWCLSKSNRCITNSIPAAEGTLCQTHTIDKGWCYKRVCVPFG SRPEGVDGAWGPWTPWGDCSRTCGGGVSSSSRHCDSPRPTIGGKYCLGERRRHRSCNTDD CPPGSQDFREVQCSEFDSIPFRGKFYKWKTYRGGGVKACSLTCLAEGFNFYTERAAAVVD GTPCRPDTVDICVSGECKHVGCDRVLGSDLREDKCRVCGGDGSACETIEGVFSPASPGAG YEDVVWIPKGSVHIFIQDLNLSLSHLALKGDQESLLLEGLPGTPQPHRLPLAGTTFQLRQ GPDQVQSLEALGPINASLIVMVLARTELPALRYRFNAPIARDSLPPYSWHYAPWTKCSAQ CAGGSQVQAVECRNQLDSSAVAPHYCSAHSKLPKRQRACNTEPCPPDWVVGNWSLCSRSC DAGVRSRSVVCQRRVSAAEEKALDDSACPQPRPPVLEACHGPTCPPEWAALDWSECTPSC GPGLRHRVVLCKSADHRATLPPAHCSPAAKPPATMRCNLRRCPPARWVAGEWGECSAQCG VGQRQRSVRCTSHTGQASHECTEALRPPTTQQCEAKCDSPTPGDGPEECKDVNKVAYCPL VLKFQFCSRAYFRQMCCKTCHGH
Coding Sequence Details
Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None
Recommended Growth Condition:
Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:
bacterial
Marker:
ampicillin
Bacterial Selection Condition:
100 ug/mL ampicillin
Growth Condition:
Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:
Commonly used conditions for ampicillin resistant plasmid clones.
Protein Expression Results:
None
Recommended expression in:
Not Applicable
Vector Name:
pJFT7_nHalo_DC(r4)
Synonyms:
''
Description:
In vitro expression vector with a T7 promoter and N-terminal TEV-cleavable Halo tag; ampicillin resistance in bacteria; Gateway or Flexi cloning compatible
Comments:
One in a series of pJFT7 vectors made by J. Saul for IVTT protein expression at CPD. This vector has been modified to improve sequencing the insert with a reverse primer.
Size (bp):
6140
Parent Vector:
None
Properties:
Gateway, acceptor (destination), in vitro transcription, recombinational cloning, with tag/fusion/marker
Author Name:
Arizona State University
Joshua LaBaer
Ji Qiu
Justin Saul
Fernanda Festa
Andrea Throop
Center for Personalized Diagnostics
Joshua LaBaer
Ji Qiu
Justin Saul
Fernanda Festa
Andrea Throop
Center for Personalized Diagnostics
Publications:
None
Vector Map:
Vector Sequence:
Sequence:
Vector Features:
Type
Name
Description
Start
End
bacterial origin
ColE
ColE1 origin
3425
4107
death cassette
ccdB
ccdB death cassette (removed in plasmids containing a gene insert)
2785
2994
enhancer
CITE
CITE enhancer
17
515
protease cleavage site
TEV
TEV protease cleavage site
1422
1442
recombination site
attR1
attR1 recombination site
1458
1474
recombination site
attR2
recombination site
3145
3160
selectable marker
AmpR
ampicillin resistance
4205
4864
selectable marker
CmR
chloramphenicol resistance (removed in clones containing a gene insert)
1691
2347
ssDNA origin
f1
f1 origin
5633
5939
tag
HALO
N-terminal HALO tag
522
1409
