Gene:
Gene Symbol:
Gene Name:
Original Clone ID:
None
Keyword:
None
Species:
Homo sapiens
Type:
cDNA
Vector Name:
pJFT7_nHalo_DC(r4)
Format:
FUSION
Source:
Center for Personalized Diagnostics
Description:
None
Comments:
None
Mutation / Discrepancy:
No / No
Publications:
None
Authors:
Center for Personalized Diagnostics
HsCD00846170
Price:
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AVAILABLE
No restriction
Special MTA: HALO
Special MTA: HALO
Insert sequence: 3597nts
Open reading frame: 1 to 3597
ATGCCGCTGACTGGTGTAGAGCCCGCCAGAATGAACAGGAAGAAAGGAGACAAGGGCTTT
GAAAGCCCAAGGCCATATAAATTAACCCATCAGGTCGTCTGCATCAACAACATAAATTTC
CAGAGAAAATCTGTTGTGGGATTTGTGGAACTGACTATATTTCCCACAGTTGCAAACTTG
AATAGAATCAAGTTGAACAGCAAACAGTGTAGAATATACCGAGTAAGGATCAATGATTTA
GAGGCTGCTTTTATTTATAATGACCCAACCTTGGAAGTTTGTCACAGTGAATCAAAACAG
AGAAACCTCAATTATTTTTCCAATGCTTATGCAGCTGCAGTTAGTGCTGTGGACCCTGAT
GCAGGAAATGGAGAACTTTGCATTAAGGTTCCATCAGAGCTATGGAAACACGTTGATGAG
TTAAAGGTCCTGAAGATACACATCAATTTTTCTTTGGATCAGCCCAAAGGAGGTCTTCAT
TTTGTGGTACCCAGTGTAGAGGGAAGTATGGCAGAGAGAGGTGCTCATGTTTTCTCTTGT
GGGTATCAAAATTCTACAAGATTTTGGTTCCCTTGTGTTGATTCATACTCTGAATTGTGT
ACATGGAAATTAGAATTTACAGTAGATGCTGCAATGGTTGCTGTTTCTAATGGCGATTTG
GTGGAGACAGTGTATACTCATGATATGAGGAAGAAAACTTTCCATTATATGCTTACCATT
CCTACAGCAGCGTCAAATATCTCCTTGGCCATTGGACCATTTGAAATACTGGTAGATCCA
TACATGCATGAGGTTACTCATTTTTGTTTGCCCCAACTTCTTCCATTGCTGAAACATACC
ACATCATACCTTCATGAAGTCTTTGAATTTTATGAAGAAATTCTTACATGTCGTTACCCA
TACTCCTGTTTTAAGACTGTCTTCATTGATGAGGCTTATGTTGAAGTGGCTGCTTATGCT
TCCATGAGCATTTTTAGCACAAATCTTTTACACAGTGCCATGATTATAGATGAGACACCT
TTGACTAGAAGGTGTTTAGCCCAATCCTTGGCCCAGCAGTTTTTTGGTTGTTTCATATCT
AGAATGTCTTGGTCTGATGAATGGGTGCTGAAGGGAATTTCAGGCTATATCTATGGACTT
TGGATGAAAAAAACTTTTGGTGTTAATGAGTACCGCCATTGGATTAAAGAGGAGCTAGAC
AAAATAGTGGCATATGAACTAAAAACTGGTGGGGTTTTACTACATCCCATATTTGGTGGA
GGAAAAGAGAAGGATAATCCGGCTTCCCATCTACACTTTTCAATAAAGCATCCACATACA
CTGTCCTGGGAATACTACACTATGTTTCAGTGTAAAGCCCACCTTGTGATGAGATTGATT
GAAAATAGGATCAGTATGGAATTTATGCTACAAGTTTTCAATAAACTGCTAAGTCTGGCT
AGTACTGCTTCATCTCAGAAGTTCCAGTCACATATGTGGAGTCAGATGTTGGTTTCCACA
TCTGGGTTTTTGAAATCCATTTCAAATGTCTCTGGCAAAGATATTCAGCCGTTAATAAAG
CAGTGGGTAGATCAGAGTGGAGTGGTAAAATTTTATGGAAGTTTTGCATTTAATAGAAAA
CGAAATGTCTTGGAACTGGAAATAAAACAGGACTATACATCTCCTGGAACTCAGAAATAC
GTGGGACCACTTAAAGTGACAGTGCAGGAGTTAGATGGATCCTTCAATCATACACTGCAA
ATTGAAGAAAACAGCCTTAAACATGATATACCCTGCCATTCCAAAAGTAGAAGGAATAAA
AAGAAAAAAATCCCACTGATGAATGGAGAAGAAGTTGATATGGATCTTTCTGCAATGGAT
GCTGATTCCCCTTTGCTGTGGATAAGGATAGACCCAGATATGTCAGTATTGAGGAAGGTA
GAATTTGAGCAAGCTGATTTTATGTGGCAGTATCAGCTCCGCTATGAGAGAGATGTTGTT
GCACAGCAGGAATCCATTTTGGCTTTGGAAAAATTCCCTACTCCAGCATCTCGGCTTGCA
CTCACTGATATATTAGAACAAGAGCAGTGTTTCTACAGAGTAAGAATGTCAGCTTGCTTC
TGTCTTGCAAAGATTGCAAATTCAATGGTGAGCACATGGACAGGACCACCAGCCATGAAG
TCACTCTTCACTAGGATGTTTTGTTGTAAAAGTTGTCCAAACATTGTGAAAACAAACAAC
TTTATGAGCTTTCAAAGCTATTTTCTACAGAAGACTATGCCAGTTGCAATGGCTTTATTA
AGAGATGTTCATAATCTTTGTCCTAAAGAAGTCTTAACATTTATTTTAGACTTAATCAAG
TACAATGACAACAGGAAAAATAAGTTTTCAGATAACTATTATCGTGCAGAAATGATTGAT
GCCCTGGCCAACTCTGTTACACCTGCAGTCAGTGTGAATAATGAAGTTAGAACTTTGGAT
AACTTAAATCCTGATGTGCGACTCATTCTTGAAGAAATCACCAGATTTTTGAATATGGAA
AAACTTCTTCCGAGTTACAGGCATACCATCACTGTCAGTTGTTTGAGAGCCATACGGGTA
CTTCAGAAGAACGGACATGTGCCAAGTGATCCAGCTCTTTTTAAATCTTATGCTGAATAT
GGCCACTTTGTGGACATTAGGATAGCAGCTTTGGAAGCAGTTGTTGATTATACTAAAGTG
GACAGAAGTTATGAAGAACTGCAATGGCTACTTAATATGATTCAGAATGACCCTGTACCC
TATGTAAGGCATAAGATTCTCAACATGTTGACTAAGAACCCACCATTTACTAAGAACATG
GAGTCTCCCTTATGCAATGAAGCCCTGGTAGATCAACTTTGGAAACTTATGAATTCTGGT
ACTTCACATGACTGGAGGTTACGGTGTGGTGCTGTGGACTTGTACTTCACACTTTTTGGC
CTCAGTAGACCTTCCTGTTTACCCTTGCCAGAGCTTGGGTTGGTTCTTAATCTAAAGGAG
AAAAAAGCTGTCTTGAATCCTACCATAATTCCAGAGTCAGTAGCAGGCAACCAAGAAGCT
GCAAATAATCCAAGCAGTCACCCACAGCTAGTTGGATTTCAGAACCCTTTTTCCAGTTCT
CAAGATGAGGAGGAGATTGATATGGATACTGTTCATGATAGCCAGGCCTTCATTTCCCAT
CATTTAAACATGCTTGAAAGGCCGTCAACTCCAGGGCTCTCGAAATATCGGCCAGCTAGC
TCCCGATCTGCTTTAATACCCCAGCACTCAGCAGGCTGTGACAGCACACCCACCACAAAA
CCCCAGTGGAGTTTGGAACTTGCACGGAAGGGAACAGGTAAAGAACAAGCACCTTTGGAG
ATGAGTATGCATCCAGCGGCAAGCGCTCCACTCTCAGTCTTTACTAAGGAATCTACAGCC
TCCAAACACAGTGACCACCATCACCACCATCACCATGAGCACAAGAAAAAGAAGAAGAAG
CATAAACATAAGCACAAACACAAGCATAAGCATGACAGTAAAGAAAAGGACAAGGAGCCT
TTCACTTTCTCCAGCCCTGCCAGTGGCAGGTCTATTCGTTCTCCTTCCCTTTCAGAC
Protein sequence predicted based on nucleotide sequence
MPLTGVEPARMNRKKGDKGFESPRPYKLTHQVVCINNINFQRKSVVGFVELTIFPTVANL NRIKLNSKQCRIYRVRINDLEAAFIYNDPTLEVCHSESKQRNLNYFSNAYAAAVSAVDPD AGNGELCIKVPSELWKHVDELKVLKIHINFSLDQPKGGLHFVVPSVEGSMAERGAHVFSC GYQNSTRFWFPCVDSYSELCTWKLEFTVDAAMVAVSNGDLVETVYTHDMRKKTFHYMLTI PTAASNISLAIGPFEILVDPYMHEVTHFCLPQLLPLLKHTTSYLHEVFEFYEEILTCRYP YSCFKTVFIDEAYVEVAAYASMSIFSTNLLHSAMIIDETPLTRRCLAQSLAQQFFGCFIS RMSWSDEWVLKGISGYIYGLWMKKTFGVNEYRHWIKEELDKIVAYELKTGGVLLHPIFGG GKEKDNPASHLHFSIKHPHTLSWEYYTMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLA STASSQKFQSHMWSQMLVSTSGFLKSISNVSGKDIQPLIKQWVDQSGVVKFYGSFAFNRK RNVLELEIKQDYTSPGTQKYVGPLKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNK KKKIPLMNGEEVDMDLSAMDADSPLLWIRIDPDMSVLRKVEFEQADFMWQYQLRYERDVV AQQESILALEKFPTPASRLALTDILEQEQCFYRVRMSACFCLAKIANSMVSTWTGPPAMK SLFTRMFCCKSCPNIVKTNNFMSFQSYFLQKTMPVAMALLRDVHNLCPKEVLTFILDLIK YNDNRKNKFSDNYYRAEMIDALANSVTPAVSVNNEVRTLDNLNPDVRLILEEITRFLNME KLLPSYRHTITVSCLRAIRVLQKNGHVPSDPALFKSYAEYGHFVDIRIAALEAVVDYTKV DRSYEELQWLLNMIQNDPVPYVRHKILNMLTKNPPFTKNMESPLCNEALVDQLWKLMNSG TSHDWRLRCGAVDLYFTLFGLSRPSCLPLPELGLVLNLKEKKAVLNPTIIPESVAGNQEA ANNPSSHPQLVGFQNPFSSSQDEEEIDMDTVHDSQAFISHHLNMLERPSTPGLSKYRPAS SRSALIPQHSAGCDSTPTTKPQWSLELARKGTGKEQAPLEMSMHPAASAPLSVFTKESTA SKHSDHHHHHHHEHKKKKKKHKHKHKHKHKHDSKEKDKEPFTFSSPASGRSIRSPSLSD
Coding Sequence Details
Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None
Recommended Growth Condition:
Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:
bacterial
Marker:
ampicillin
Bacterial Selection Condition:
100 ug/mL ampicillin
Growth Condition:
Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:
Commonly used conditions for ampicillin resistant plasmid clones.
Protein Expression Results:
None
Recommended expression in:
Not Applicable
Vector Name:
pJFT7_nHalo_DC(r4)
Synonyms:
''
Description:
In vitro expression vector with a T7 promoter and N-terminal TEV-cleavable Halo tag; ampicillin resistance in bacteria; Gateway or Flexi cloning compatible
Comments:
One in a series of pJFT7 vectors made by J. Saul for IVTT protein expression at CPD. This vector has been modified to improve sequencing the insert with a reverse primer.
Size (bp):
6140
Parent Vector:
None
Properties:
Gateway, acceptor (destination), in vitro transcription, recombinational cloning, with tag/fusion/marker
Author Name:
Arizona State University
Joshua LaBaer
Ji Qiu
Justin Saul
Fernanda Festa
Andrea Throop
Center for Personalized Diagnostics
Joshua LaBaer
Ji Qiu
Justin Saul
Fernanda Festa
Andrea Throop
Center for Personalized Diagnostics
Publications:
None
Vector Map:
Vector Sequence:
Sequence:
Vector Features:
Type
Name
Description
Start
End
bacterial origin
ColE
ColE1 origin
3425
4107
death cassette
ccdB
ccdB death cassette (removed in plasmids containing a gene insert)
2785
2994
enhancer
CITE
CITE enhancer
17
515
protease cleavage site
TEV
TEV protease cleavage site
1422
1442
recombination site
attR1
attR1 recombination site
1458
1474
recombination site
attR2
recombination site
3145
3160
selectable marker
AmpR
ampicillin resistance
4205
4864
selectable marker
CmR
chloramphenicol resistance (removed in clones containing a gene insert)
1691
2347
ssDNA origin
f1
f1 origin
5633
5939
tag
HALO
N-terminal HALO tag
522
1409
