Gene:
Gene Symbol:
Gene Name:
Original Clone ID:
None
Keyword:
STOP codon removed based on OC annotation
Species:
Homo sapiens
Type:
cDNA
Vector Name:
pJFT7_nHalo_DC(r4)
Format:
FUSION
Source:
Center for Personalized Diagnostics
Description:
None
Comments:
None
Mutation / Discrepancy:
No / No
Publications:
None
Authors:
Center for Personalized Diagnostics
HsCD00850694
Price:
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AVAILABLE
No restriction
Special MTA: HALO
Special MTA: HALO
Insert sequence: 4038nts
Open reading frame: 1 to 4038
ATGAAATCCCCAAGGAGAACCACTTTGTGCCTCATGTTTATTGTGATTTATTCTTCCAAA
GCTGCACTGAACTGGAATTACGAGTCTACTATTCATCCTTTGAGTCTTCATGAACATGAA
CCAGCTGGTGAAGAGGCACTGAGGCAAAAACGAGCCGTTGCCACAAAAAGTCCTACGGCT
GAAGAATACACTGTTAATATTGAGATCAGTTTTGAAAATGCATCCTTCCTGGATCCTATC
AAAGCCTACTTGAACAGCCTCAGTTTTCCAATTCATGGGAATAACACTGACCAAATTACC
GACATTTTGAGCATAAATGTGACAACAGTCTGCAGACCTGCTGGAAATGAAATCTGGTGC
TCCTGCGAGACAGGTTATGGGTGGCCTCGGGAAAGGTGTCTTCACAATCTCATTTGTCAA
GAGCGTGACGTCTTCCTCCCAGGGCACCATTGCAGTTGCCTTAAAGAACTGCCTCCCAAT
GGACCTTTTTGCCTGCTTCAGGAAGATGTTACCCTGAACATGAGAGTCAGACTAAATGTA
GGCTTTCAAGAAGACCTCATGAACACTTCCTCCGCCCTCTATAGGTCCTACAAGACCGAC
TTGGAAACAGCGTTCCGGAAGGGTTACGGAATTTTACCAGGCTTCAAGGGCGTGACTGTG
ACAGGGTTCAAGTCTGGAAGTGTGGTTGTGACATATGAAGTCAAGACTACACCACCATCA
CTTGAGTTAATACATAAAGCCAATGAACAAGTTGTACAGAGCCTCAATCAGACCTACAAA
ATGGACTACAACTCCTTTCAAGCAGTTACTATCAATGAAAGCAATTTCTTTGTCACACCA
GAAATCATCTTTGAAGGGGACACAGTCAGTCTGGTGTGTGAAAAGGAAGTTTTGTCCTCC
AATGTGTCTTGGCGCTATGAAGAACAGCAGTTGGAAATCCAGAACAGCAGCAGATTCTCG
ATTTACACCGCACTTTTCAACAACATGACTTCGGTGTCCAAGCTCACCATCCACAACATC
ACTCCAGGTGATGCAGGTGAATATGTTTGCAAACTGATATTAGACATTTTTGAATATGAG
TGCAAGAAGAAAATAGATGTTATGCCCATCCAAATTTTGGCAAATGAAGAAATGAAGGTG
ATGTGCGACAACAATCCTGTATCTTTGAACTGCTGCAGTCAGGGTAATGTTAATTGGAGC
AAAGTAGAATGGAAGCAGGAAGGAAAAATAAATATTCCAGGAACCCCTGAGACAGACATA
GATTCTAGCTGCAGCAGATACACCCTCAAGGCTGATGGAACCCAGTGCCCAAGCGGGTCG
TCTGGAACAACAGTCATCTACACTTGTGAGTTCATCAGTGCCTATGGAGCCAGAGGCAGT
GCAAACATAAAAGTGACATTCATCTCTGTGGCCAATCTAACAATAACCCCGGACCCAATT
TCTGTTTCTGAGGGACAAAACTTTTCTATAAAATGCATCAGTGATGTGAGTAACTATGAT
GAGGTTTATTGGAACACTTCTGCTGGAATTAAAATATACCAAAGATTTTATACCACGAGG
AGGTATCTTGATGGAGCAGAATCAGTACTGACAGTCAAGACCTCGACCAGGGAGTGGAAT
GGAACCTATCACTGCATATTTAGATATAAGAATTCATACAGTATTGCAACCAAAGACGTC
ATTGTTCACCCGCTGCCTCTAAAGCTGAACATCATGGTTGATCCTTTGGAAGCTACTGTT
TCATGCAGTGGTTCCCATCACATCAAGTGCTGCATAGAGGAGGATGGAGACTACAAAGTT
ACTTTCCATATGGGTTCCTCATCCCTTCCTGCTGCAAAAGAAGTTAACAAAAAACAAGTG
TGCTACAAACACAATTTCAATGCAAGCTCAGTTTCCTGGTGTTCAAAAACTGTTGATGTG
TGTTGTCACTTTACCAATGCTGCTAATAATTCAGTTTGGAGCCCATCTATGAAGCTGAAT
CTGGTTCCTGGGGAAAACATCACATGCCAGGATCCCGTAATAGGTGTCGGAGAGCCGGGG
AAAGTCATCCAGAAGCTATGCCGGTTCTCAAACGTTCCCAGCAGCCCTGAGAGTCCCATT
GGCGGGACCATCACTTACAAATGTGTAGGCTCCCAGTGGGAGGAGAAGAGAAATGACTGC
ATCTCTGCCCCAATAAACAGTCTGCTCCAGATGGCTAAGGCTTTGATCAAGAGCCCCTCT
CAGGATGAGATGCTCCCTACATACCTGAAGGATCTTTCTATTAGCATAGACAAAGCGGAA
CATGAAATCAGCTCTTCTCCTGGGAGTCTGGGAGCCATTATTAACATCCTTGATCTGCTC
TCAACAGTTCCAACCCAAGTAAATTCAGAAATGATGACGCACGTGCTCTCTACGGTTAAT
GTCATCCTTGGCAAGCCCGTCTTGAACACCTGGAAGGTTTTACAACAGCAATGGACCAAT
CAGAGTTCACAGCTACTACATTCAGTGGAAAGATTTTCCCAAGCATTACAGTCAGGAGAT
AGCCCTCCTTTGTCCTTCTCCCAAACTAATGTGCAGATGAGCAGCACGGTAATCAAGTCC
AGCCACCCAGAAACCTATCAACAGAGGTTTGTTTTCCCATACTTTGACCTCTGGGGCAAT
GTGGTCATTGACAAGAGCTATCTAGAAAACTTGCAGTCGGATTCGTCTATTGTCACCATG
GCTTTCCCAACTCTCCAAGCCATCCTTGCTCAGGATATCCAGGAAAATAACTTTGCAGAG
AGCTTAGTGATGACAACCACTGTCAGCCACAATACGACTATGCCATTCAGGATTTCAATG
ACTTTTAAGAACAATAGCCCTTCAGGCGGCGAAACGAAGTGTGTCTTCTGGAACTTCAGG
CTTGCCAACAACACAGGGGGGTGGGACAGCAGTGGGTGCTATGTTGAAGAAGGTGATGGG
GACAATGTCACCTGTATCTGTGACCACCTAACATCATTCTCCATCCTCATGTCCCCTGAC
TCCCCAGATCCTAGTTCTCTCCTGGGAATACTCCTGGATATTATTTCTTATGTTGGGGTG
GGCTTTTCCATCTTGAGCTTGGCAGCCTGTCTAGTTGTGGAAGCTGTGGTGTGGAAATCG
GTGACCAAGAATCGGACTTCTTATATGCGCCACACCTGCATAGTGAATATCGCTGCCTCC
CTTCTGGTCGCCAACACCTGGTTCATTGTGGTCGCTGCCATCCAGGACAATCGCTACATA
CTCTGCAAGACAGCCTGTGTGGCTGCCACCTTCTTCATCCACTTCTTCTACCTCAGCGTC
TTCTTCTGGATGCTGACACTGGGCCTCATGCTGTTCTATCGCCTGGTTTTCATTCTGCAT
GAAACAAGCAGGTCCACTCAGAAAGCCATTGCCTTCTGTCTTGGCTATGGCTGCCCACTT
GCCATCTCGGTCATCACGCTGGGAGCCACCCAGCCCCGGGAAGTCTATACGAGGAAGAAT
GTCTGTTGGCTCAACTGGGAGGACACCAAGGCCCTGCTGGCTTTCGCCATCCCAGCACTG
ATCATTGTGGTGGTGAACATAACCATCACTATTGTGGTCATCACCAAGATCCTGAGGCCT
TCCATTGGAGACAAGCCATGCAAGCAGGAGAAGAGCAGCCTGTTTCAGATCAGCAAGAGC
ATTGGGGTCCTCACACCACTCTTGGGCCTCACTTGGGGTTTTGGTCTCACCACTGTGTTC
CCAGGGACCAACCTTGTGTTCCATATCATATTTGCCATCCTCAATGTCTTCCAGGGATTA
TTCATTTTACTCTTTGGATGCCTCTGGGATCTGAAGGTACAGGAAGCTTTGCTGAATAAG
TTTTCATTGTCGAGATGGTCTTCACAGCACTCAAAGTCAACATCCCTGGGTTCATCCACA
CCTGTGTTTTCTATGAGTTCTCCAATATCAAGGAGATTTAACAATTTGTTTGGTAAAACA
GGAACGTATAATGTTTCCACCCCAGAAGCAACCAGCTCATCCCTGGAAAACTCATCCAGT
GCTTCTTCGTTGCTCAAC
Protein sequence predicted based on nucleotide sequence
MKSPRRTTLCLMFIVIYSSKAALNWNYESTIHPLSLHEHEPAGEEALRQKRAVATKSPTA EEYTVNIEISFENASFLDPIKAYLNSLSFPIHGNNTDQITDILSINVTTVCRPAGNEIWC SCETGYGWPRERCLHNLICQERDVFLPGHHCSCLKELPPNGPFCLLQEDVTLNMRVRLNV GFQEDLMNTSSALYRSYKTDLETAFRKGYGILPGFKGVTVTGFKSGSVVVTYEVKTTPPS LELIHKANEQVVQSLNQTYKMDYNSFQAVTINESNFFVTPEIIFEGDTVSLVCEKEVLSS NVSWRYEEQQLEIQNSSRFSIYTALFNNMTSVSKLTIHNITPGDAGEYVCKLILDIFEYE CKKKIDVMPIQILANEEMKVMCDNNPVSLNCCSQGNVNWSKVEWKQEGKINIPGTPETDI DSSCSRYTLKADGTQCPSGSSGTTVIYTCEFISAYGARGSANIKVTFISVANLTITPDPI SVSEGQNFSIKCISDVSNYDEVYWNTSAGIKIYQRFYTTRRYLDGAESVLTVKTSTREWN GTYHCIFRYKNSYSIATKDVIVHPLPLKLNIMVDPLEATVSCSGSHHIKCCIEEDGDYKV TFHMGSSSLPAAKEVNKKQVCYKHNFNASSVSWCSKTVDVCCHFTNAANNSVWSPSMKLN LVPGENITCQDPVIGVGEPGKVIQKLCRFSNVPSSPESPIGGTITYKCVGSQWEEKRNDC ISAPINSLLQMAKALIKSPSQDEMLPTYLKDLSISIDKAEHEISSSPGSLGAIINILDLL STVPTQVNSEMMTHVLSTVNVILGKPVLNTWKVLQQQWTNQSSQLLHSVERFSQALQSGD SPPLSFSQTNVQMSSTVIKSSHPETYQQRFVFPYFDLWGNVVIDKSYLENLQSDSSIVTM AFPTLQAILAQDIQENNFAESLVMTTTVSHNTTMPFRISMTFKNNSPSGGETKCVFWNFR LANNTGGWDSSGCYVEEGDGDNVTCICDHLTSFSILMSPDSPDPSSLLGILLDIISYVGV GFSILSLAACLVVEAVVWKSVTKNRTSYMRHTCIVNIAASLLVANTWFIVVAAIQDNRYI LCKTACVAATFFIHFFYLSVFFWMLTLGLMLFYRLVFILHETSRSTQKAIAFCLGYGCPL AISVITLGATQPREVYTRKNVCWLNWEDTKALLAFAIPALIIVVVNITITIVVITKILRP SIGDKPCKQEKSSLFQISKSIGVLTPLLGLTWGFGLTTVFPGTNLVFHIIFAILNVFQGL FILLFGCLWDLKVQEALLNKFSLSRWSSQHSKSTSLGSSTPVFSMSSPISRRFNNLFGKT GTYNVSTPEATSSSLENSSSASSLLN
Coding Sequence Details
Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None
Recommended Growth Condition:
Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:
bacterial
Marker:
ampicillin
Bacterial Selection Condition:
100 ug/mL ampicillin
Growth Condition:
Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:
Commonly used conditions for ampicillin resistant plasmid clones.
Protein Expression Results:
None
Recommended expression in:
Not Applicable
Vector Name:
pJFT7_nHalo_DC(r4)
Synonyms:
''
Description:
In vitro expression vector with a T7 promoter and N-terminal TEV-cleavable Halo tag; ampicillin resistance in bacteria; Gateway or Flexi cloning compatible
Comments:
One in a series of pJFT7 vectors made by J. Saul for IVTT protein expression at CPD. This vector has been modified to improve sequencing the insert with a reverse primer.
Size (bp):
6140
Parent Vector:
None
Properties:
Gateway, acceptor (destination), in vitro transcription, recombinational cloning, with tag/fusion/marker
Author Name:
Arizona State University
Joshua LaBaer
Ji Qiu
Justin Saul
Fernanda Festa
Andrea Throop
Center for Personalized Diagnostics
Joshua LaBaer
Ji Qiu
Justin Saul
Fernanda Festa
Andrea Throop
Center for Personalized Diagnostics
Publications:
None
Vector Map:
Vector Sequence:
Sequence:
Vector Features:
Type
Name
Description
Start
End
bacterial origin
ColE
ColE1 origin
3425
4107
death cassette
ccdB
ccdB death cassette (removed in plasmids containing a gene insert)
2785
2994
enhancer
CITE
CITE enhancer
17
515
protease cleavage site
TEV
TEV protease cleavage site
1422
1442
recombination site
attR1
attR1 recombination site
1458
1474
recombination site
attR2
recombination site
3145
3160
selectable marker
AmpR
ampicillin resistance
4205
4864
selectable marker
CmR
chloramphenicol resistance (removed in clones containing a gene insert)
1691
2347
ssDNA origin
f1
f1 origin
5633
5939
tag
HALO
N-terminal HALO tag
522
1409
