Gene:
Gene Symbol:
Gene Name:
Original Clone ID:
None
Keyword:
None
Species:
Homo sapiens
Type:
cDNA
Vector Name:
pDONR221
Format:
FUSION
Source:
Center for Personalized Diagnostics
Description:
None
Comments:
None
Mutation / Discrepancy:
No / No
Publications:
None
Authors:
Center for Personalized Diagnostics
HsCD00862473
Price:
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AVAILABLE
No restriction
Special MTA: None
Special MTA: None
Insert sequence: 5499nts
Open reading frame: 1 to 5499
ATGGAGGACACACCCCCCTCACTCAGCTGCTCCGACTGTCAGCGCCACTTTCCCAGCCTC
CCAGAGCTCTCTCGGCACCGAGAACTGCTCCATCCATCTCCCAACCAGGACAGTGAGGAG
GCTGACAGCATCCCTCGGCCCTACCGTTGTCAGCAGTGTGGGCGGGGCTACCGTCACCCC
GGGAGCCTGGTTAACCATCGTCGGACCCACGAGACTGGCCTTTTCCCCTGTACCACCTGT
GGCAAGGACTTCTCCAATCCCATGGCTCTCAAGAGCCATATGAGGACACATGCTCCTGAG
GGCCGCCGCAGGCACAGGCCCCCACGCCCCAAGGAAGCCACTCCACACCTCCAGGGTGAG
ACGGTGTCCACTGACTCCTGGGGCCAAAGGCTTGGCTCTAGTGAAGGCTGGGAAAACCAG
ACAAAACATACAGAAGAGACACCTGACTGTGAATCTGTACCTGACCCCAGGGCAGCTTCG
GGTACGTGGGAAGATCTGCCCACCAGACAAAGAGAAGGCTTGGCAAGCCACCCAGGTCCT
GAGGATGGTGCAGACGGCTGGGGACCCTCCACTAACTCTGCCAGAGCCCCTCCTCTCCCC
ATCCCAGCCAGCAGCCTTCTTAGCAACTTGGAACAGTATCTGGCTGAATCAGTAGTGAAC
TTCACAGGGGGCCAGGAGCCCACCCAGTCCCCTCCTGCTGAGGAGGAGCGGCGGTACAAA
TGTAGTCAGTGTGGCAAGACCTACAAGCACGCCGGGAGCCTCACCAACCACCGCCAGAGC
CACACGCTGGGCATCTACCCCTGTGCCATCTGTTTCAAGGAGTTCTCTAACCTCATGGCT
CTGAAGAACCACTCTCGACTGCATGCCCAGTATCGGCCTTACCACTGTCCCCACTGCCCC
CGTGTCTTCCGGCTCCCCCGGGAGCTGCTGGAACACCAGCAGTCCCATGAGGGTGAAAGG
CAGGAGCCACGCTGGGAGGAGAAAGGGATGCCCACCACCAATGGGCACACAGATGAGAGC
AGCCAGGACCAGCTCCCCAGTGCACAGATGCTGAATGGCTCTGCGGAGCTCAGCACCTCT
GGGGAGCTGGAGGACAGTGGCCTGGAGGAATACCGGCCTTTCCGCTGTGGGGACTGTGGC
CGTACTTACCGCCATGCTGGGAGCCTCATCAACCATCGAAAGAGCCACCAGACAGGTGTC
TACCCCTGCTCACTCTGTTCTAAGCAGCTGTTCAATGCGGCTGCCCTCAAAAACCATGTG
CGGGCTCATCACAGGCCCAGGCAAGGAGTTGGGGAAAATGGGCAGCCATCAGTCCCACCA
GCTCCCCTGCTGCTGGCTGAGACCACCCACAAAGAGGAAGAGGACCCCACCACCACCCTG
GACCATCGGCCCTATAAGTGCAGTGAGTGTGGTCGTGCTTACCGCCACCGGGGGAGCCTG
GTGAACCATCGCCACAGCCATCGGACTGGAGAGTACCAGTGCTCACTCTGTCCCCGCAAG
TACCCCAATCTCATGGCCCTGCGCAACCACGTGCGGGTACATTGCAAGGCTGCTCGCCGA
AGTGCAGACATCGGGGCTGAGGGTGCCCCCAGCCACCTCAAGGTAGAACTCCCGCCTGAC
CCAGTGGAGGCAGAGGCAGCCCCGCACACAGATCAGGACCATGTGTGCAAACATGAAGAA
GAGGCCACGGACATCACCCCAGCAGCAGACAAGACAGCAGCACATATCTGTAGCATCTGT
GGGCTGCTCTTTGAAGACGCTGAGAGCCTTGAACGTCATGGCCTGACTCATGGGGCAGGG
GAAAAGGAAAATAGCAGAACAGAGACCACAATGTCACCTCCTAGGGCCTTTGCCTGCCGA
GACTGTGGAAAGAGCTATCGCCACTCAGGCAGCCTTATCAACCACAGGCAGACCCACCAG
ACAGGAGACTTCAGTTGTGGGGCCTGTGCCAAGCACTTCCACACCATGGCTGCCATGAAG
AACCACTTGCGCCGGCACAGTCGGCGGCGGAGCAGGCGGCATCGGAAGCGGGCTGGCGGT
GCCAGCGGTGGGAGAGAAGCCAAACTCCTGGCAGCGGAGAGCTGGACCCGGGAGCTAGAA
GACAATGAAGGCCTGGAGTCTCCCCAAGACCCTTCAGGGGAAAGTCCTCATGGGGCTGAA
GGCAACCTGGAAAGTGATGGGGACTGTTTGCAGGCTGAATCTGAAGGGGACAAATGTGGG
CTTGAGAGGGATGAGACCCATTTCCAGGGTGATAAAGAGAGCGGAGGCACTGGGGAAGGA
CTGGAAAGGAAGGATGCCAGTTTACTTGACAACTTGGACATCCCAGGTGAGGAAGGTGGT
GGCACTCACTTCTGCGATAGCCTCACTGGGGTGGATGAAGACCAGAAGCCAGCCACTGGC
CAACCCAACTCCTCTTCCCACTCTGCCAATGCTGTCACTGGCTGGCAGGCTGGGGCCGCT
CACACATGCTCTGACTGTGGGCATTCTTTCCCCCATGCCACTGGCCTGCTGAGCCACAGG
CCCTGCCACCCACCAGGCATCTATCAGTGCTCCCTCTGCCCGAAGGAGTTTGACTCTCTG
CCTGCCCTCCGCAGCCACTTCCAGAACCATAGGCCTGGGGAGGCGACCTCAGCACAGCCT
TTCCTCTGCTGCCTCTGTGGCATGATCTTCCCTGGGCGGGCTGGCTACAGGCTTCACCGG
CGCCAGGCCCACAGCTCCTCTGGCATGACTGAGGGCTCAGAGGAGGAGGGGGAAGAGGAA
GGAGTGGCAGAGGCAGCCCCTGCACGCAGTCCACCACTGCAGCTCTCGGAAGCAGAGCTG
CTGAATCAGCTGCAGCGGGAGGTGGAAGCGCTGGACAGTGCAGGGTATGGGCACATCTGT
GGCTGCTGTGGTCAGACCTACGATGACCTGGGGAGCCTGGAGCGTCACCACCAAAGTCAG
AGTTCTGGGACTACTGCAGACAAGGCTCCCAGCCCCTTGGGAGTGGCAGGTGATGCCATG
GAGATGGTCGTGGACAGTGTCTTGGAGGACATAGTGAATTCTGTCTCTGGAGAGGGTGGA
GATGCCAAGTCTCAAGAGGGAGCAGGCACCCCCTTGGGAGACAGCCTCTGCATCCAGGGT
GGGGAAAGTTTGTTGGAGGCTCAGCCCCGCCCCTTCCGCTGCAACCAGTGTGGCAAGACC
TATCGCCATGGGGGCAGCCTGGTGAACCACCGCAAGATCCACCAGACTGGAGACTTTCTC
TGCCCTGTCTGCTCCCGCTGCTACCCCAACCTGGCTGCCTACCGTAATCATCTGCGGAAC
CACCCTCGCTGCAAAGGCTCTGAGCCCCAGGTTGGGCCCATCCCAGAGGCAGCAGGTAGC
AGTGAGCTGCAGGTTGGGCCCATCCCAGAAGGAGGCAGCAACAAGCCCCAGCACATGGCA
GAGGAGGGGCCGGGGCAAGCAGAAGTCGAGAAGCTCCAGGAAGAACTTAAAGTGGAGCCC
CTGGAGGAAGTGGCCAGGGTGAAAGAAGAGGTGTGGGAGGAGACCACTGTGAAGGGGGAG
GAGATAGAGCCCAGGCTGGAGACTGCCGAGAAGGGCTGCCAGACTGAAGCCAGCTCTGAG
CGGCCCTTCAGCTGCGAGGTGTGTGGCCGATCCTACAAGCACGCCGGCAGCCTCATCAAC
CACCGGCAGAGCCACCAGACCGGCCACTTTGGCTGTCAGGCCTGCTCCAAGGGCTTCTCA
AACCTCATGTCCCTCAAGAACCACCGGCGCATCCATGCAGATCCCCGACGTTTCCGCTGC
AGCGAGTGTGGGAAGGCCTTCCGCCTGCGGAAACAGCTGGCCAGCCACCAGCGGGTCCAC
ATGGAACGGCGTGGGGGTGGGGGCACCCGAAAGGCGACTCGGGAAGATCGGCCCTTCCGC
TGTGGGCAGTGCGGGCGGACCTATCGCCACGCCGGCAGCCTCCTGAACCACCGGCGCAGC
CACGAGACGGGCCAGTACAGCTGCCCCACCTGCCCCAAGACCTACTCCAACCGCATGGCC
CTGAAGGACCACCAGAGGCTGCACTCAGAGAATCGGCGGCGACGGGCTGGACGGTCCAGG
CGCACAGCTGTGCGTTGCGCCCTCTGTGGCCGCAGCTTCCCTGGCCGGGGATCTTTGGAG
CGGCACCTGCGGGAGCATGAGGAGACAGAAAGGGAGCCAGCCAATGGCCAGGGAGGCCTG
GATGGCACAGCGGCCAGTGAGGCGAACCTGACTGGCAGCCAGGGACTAGAGACCCAATTG
GGTGGTGCTGAGCCAGTACCCCACTTGGAGGATGGAGTCCCAAGGCCAGGGGAGCGCAGT
CAGAGCCCCATCAGGGCAGCAAGCTCAGAAGCCCCAGAGCCACTGTCCTGGGGTGCAGGG
AAGGCAGGTGGGTGGCCGGTAGGTGGGGGACTGGGGAATCATAGTGGAGGCTGGGTTCCT
CAGTTCCTAACTAGGTCAGAGGAGCCAGAGGACAGTGTCCACAGGAGTCCTTGCCACGCT
GGTGACTGCCAGCTCAATGGACCTACTCTGAGTCACATGGATAGCTGGGACAACAGAGAC
AACAGCTCTCAGCTGCAGCCAGGGAGCCACTCCTCTTGCAGCCAGTGTGGCAAGACTTAC
TGCCAGTCAGGCAGCCTCTTGAACCACAACACCAACAAGACAGACCGACACTATTGCCTG
CTCTGCTCCAAGGAGTTCTTAAATCCTGTGGCCACAAAGAGCCACAGCCACAACCACATA
GACGCCCAGACCTTTGCCTGTCCTGACTGTGGCAAAGCCTTTGAGTCCCACCAGGAACTG
GCCAGCCACCTGCAGGCTCATGCCCGGGGCCACAGCCAGGTGCCAGCCCAGATGGAGGAG
GCCAGAGATCCCAAAGCCGGGACTGGGGAGGACCAGGTGGTTCTCCCTGGTCAAGGGAAA
GCCCAGGAGGCCCCATCAGAAACCCCCAGAGGCCCAGGAGAGAGTGTGGAGAGAGCCAGG
GGAGGACAAGCGGTGACGTCCATGGCGGCTGAGGACAAGGAGCGGCCCTTCCGCTGCACC
CAGTGCGGGCGCTCCTACCGCCATGCTGGCAGCCTGCTGAACCACCAGAAGGCCCACACC
ACAGGGTTGTACCCGTGCTCCCTCTGTCCCAAACTTCTCCCTAACCTGCTGTCTCTTAAG
AACCACAGCAGGACCCACACGGACCCCAAGCGCCACTGCTGCAGCATCTGTGGCAAGGCC
TTTCGGACAGCTGCCCGGCTGGAGGGCCACGGGCGGGTCCATGCACCCCGGGAGGGGCCT
TTCACCTGCCCCCATTGTCCCCGCCACTTCCGCCGCCGAATCAGCTTCGTGCAGCACCAG
CAGCAGCACCAGGAGGAGTGGACGGTGGCCGGCTCCGGAGCCCCAGTGGCACCAGTGACG
GGCAGAGGGGACTTGCCATTGCCCCCTCCACCCACCCCCACGACCCCACTCCTGGATCCT
TCACCCCAGTGGCCTGCAGACCTCAGCTTCTCCCTCTTG
Protein sequence predicted based on nucleotide sequence
MEDTPPSLSCSDCQRHFPSLPELSRHRELLHPSPNQDSEEADSIPRPYRCQQCGRGYRHP GSLVNHRRTHETGLFPCTTCGKDFSNPMALKSHMRTHAPEGRRRHRPPRPKEATPHLQGE TVSTDSWGQRLGSSEGWENQTKHTEETPDCESVPDPRAASGTWEDLPTRQREGLASHPGP EDGADGWGPSTNSARAPPLPIPASSLLSNLEQYLAESVVNFTGGQEPTQSPPAEEERRYK CSQCGKTYKHAGSLTNHRQSHTLGIYPCAICFKEFSNLMALKNHSRLHAQYRPYHCPHCP RVFRLPRELLEHQQSHEGERQEPRWEEKGMPTTNGHTDESSQDQLPSAQMLNGSAELSTS GELEDSGLEEYRPFRCGDCGRTYRHAGSLINHRKSHQTGVYPCSLCSKQLFNAAALKNHV RAHHRPRQGVGENGQPSVPPAPLLLAETTHKEEEDPTTTLDHRPYKCSECGRAYRHRGSL VNHRHSHRTGEYQCSLCPRKYPNLMALRNHVRVHCKAARRSADIGAEGAPSHLKVELPPD PVEAEAAPHTDQDHVCKHEEEATDITPAADKTAAHICSICGLLFEDAESLERHGLTHGAG EKENSRTETTMSPPRAFACRDCGKSYRHSGSLINHRQTHQTGDFSCGACAKHFHTMAAMK NHLRRHSRRRSRRHRKRAGGASGGREAKLLAAESWTRELEDNEGLESPQDPSGESPHGAE GNLESDGDCLQAESEGDKCGLERDETHFQGDKESGGTGEGLERKDASLLDNLDIPGEEGG GTHFCDSLTGVDEDQKPATGQPNSSSHSANAVTGWQAGAAHTCSDCGHSFPHATGLLSHR PCHPPGIYQCSLCPKEFDSLPALRSHFQNHRPGEATSAQPFLCCLCGMIFPGRAGYRLHR RQAHSSSGMTEGSEEEGEEEGVAEAAPARSPPLQLSEAELLNQLQREVEALDSAGYGHIC GCCGQTYDDLGSLERHHQSQSSGTTADKAPSPLGVAGDAMEMVVDSVLEDIVNSVSGEGG DAKSQEGAGTPLGDSLCIQGGESLLEAQPRPFRCNQCGKTYRHGGSLVNHRKIHQTGDFL CPVCSRCYPNLAAYRNHLRNHPRCKGSEPQVGPIPEAAGSSELQVGPIPEGGSNKPQHMA EEGPGQAEVEKLQEELKVEPLEEVARVKEEVWEETTVKGEEIEPRLETAEKGCQTEASSE RPFSCEVCGRSYKHAGSLINHRQSHQTGHFGCQACSKGFSNLMSLKNHRRIHADPRRFRC SECGKAFRLRKQLASHQRVHMERRGGGGTRKATREDRPFRCGQCGRTYRHAGSLLNHRRS HETGQYSCPTCPKTYSNRMALKDHQRLHSENRRRRAGRSRRTAVRCALCGRSFPGRGSLE RHLREHEETEREPANGQGGLDGTAASEANLTGSQGLETQLGGAEPVPHLEDGVPRPGERS QSPIRAASSEAPEPLSWGAGKAGGWPVGGGLGNHSGGWVPQFLTRSEEPEDSVHRSPCHA GDCQLNGPTLSHMDSWDNRDNSSQLQPGSHSSCSQCGKTYCQSGSLLNHNTNKTDRHYCL LCSKEFLNPVATKSHSHNHIDAQTFACPDCGKAFESHQELASHLQAHARGHSQVPAQMEE ARDPKAGTGEDQVVLPGQGKAQEAPSETPRGPGESVERARGGQAVTSMAAEDKERPFRCT QCGRSYRHAGSLLNHQKAHTTGLYPCSLCPKLLPNLLSLKNHSRTHTDPKRHCCSICGKA FRTAARLEGHGRVHAPREGPFTCPHCPRHFRRRISFVQHQQQHQEEWTVAGSGAPVAPVT GRGDLPLPPPPTPTTPLLDPSPQWPADLSFSLL
Coding Sequence Details
Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None
Recommended Growth Condition:
Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:
bacterial
Marker:
kanamycin
Bacterial Selection Condition:
50ug/mL kanamycin
Growth Condition:
Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:
Conditions for Gateway-type vectors in recombined (with insert) form and other kanamycin resistant vectors.
Protein Expression Results:
None
Recommended expression in:
Not Applicable
Vector Name:
pDONR221
Synonyms:
''
Description:
Gateway®, donor (entry), recombinational cloning clone, bacterial expression expression with rrnB T2 and rrnB T1 and M13 forward and attP1 and ccdB and CmR and cat_promoter-var002 and attP2 and T7 promoter and M13 reverse and KanR and ori; 50ug/mL of Kanamycin resistance in Pichia;
Comments:
The position of features were determined for the unrecombined (empty) form of the vector, which is described in detail on the Invitrogen website.
Size (bp):
4762
Parent Vector:
None
Properties:
Gateway, bacterial expression, donor (entry), recombinational cloning
Author Name:
Invitrogen
Publications:
None
Vector Map:
Vector Sequence:
Sequence:
Vector Features:
Type
Name
Description
Start
End
CDS
ccdB
CcdB, a bacterial toxin that poisons DNA gyrase
1197
1502
CDS
CmR
confers resistance to chloramphenicol
1847
2506
CDS
KanR
confers resistance to kanamycin in bacteria or G418 (Geneticin) in eukaryotes
3156
3965
Terminator
rrnB T2
transcription terminator T2 from the E. coli rrnB gene
268
295
Terminator
rrnB T1
transcription terminator T1 from the E. coli rrnB gene
387
473
primer_bind
M13 forward
common sequencing primer, one of multiple similar variants
537
553
primer_bind
M13 reverse
common sequencing primer, one of multiple similar variants
3027
3043
promoter
cat_promoter-var002
promoter of the E. coli cat gene encoding chloramphenicol acetyltransferase
2507
2609
promoter
T7 promoter
promoter for bacteriophage T7 RNA polymerase
3004
3022
protein binding site
attP1
recombination site for the Gateway BP reaction
570
801
protein binding site
attP2
recombination site for the Gateway BP reaction
2754
2985
rep_origin
ori
high-copy-number ColE1/pMB1/pBR322/pUC origin of replication
4112
4700
