Gene:
Gene Symbol:
Gene Name:
Original Clone ID:
None
Keyword:
None
Species:
Homo sapiens
Type:
cDNA
Vector Name:
pJFT7_nHalo_DC(r4)
Format:
CLOSED (STOP codon in vector)
Source:
Center for Personalized Diagnostics
Description:
None
Comments:
None
Mutation / Discrepancy:
No / No
Publications:
None
Authors:
Center for Personalized Diagnostics
HsCD00878162
Price:
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AVAILABLE
No restriction
Special MTA: HALO
Special MTA: HALO
Insert sequence: 4620nts
Open reading frame: 1 to 4620
ATGGACAGTTATTTTAAAGCAGCTGTCAGTGACTTGGACAAACTCCTTGATGATTTTGAA
CAGAACCCAGATGAACAAGATTATCTCCAAGATGTACAAAATGCATATGATTCTAACCAC
TGCTCAGTTTCTTCAGAGTTGGCTTCCTCACAGCGAACTTCATTGCTCCCAAAAGACCAA
GAGTGCGTTAATAGTTGTGCCTCATCAGAAACAAGCTATGGAACAAATGAGAGTTCCCTG
AATGAAAAAACACTCAAGGGACTTACTTCTATACAAAATGAAAAAAATGTAACAGGACTT
GATCTTCTTTCTTCTGTGGATGGTGGTACTTCAGATGAAATCCAGCCGTTATATATGGGA
CGATGTAGTAAACCTATCTGTGATCTGATAAGTGACATGGGTAACTTAGTTCATGCAACC
AATAGTGAAGAAGATATTAAAAAATTATTGCCAGATGATTTTAAGTCTAATGCAGATTCC
TTGATTGGATTGGATTTATCTTCAGTGTCAGATACTCCCTGTGTTTCTTCAACAGACCAT
GATAGTGATACTGTCAGAGAACAACAGAATGATATCAGTTCTGAATTACAAAATAGAGAA
ATCGGAGGAATCAAAGAATTGGGTATAAAAGTAGATACAACACTTTCAGATTCCTATAAT
TACAGTGGAACAGAAAATTTAAAAGATAAAAAGATCTTTAATCAGTTAGAATCAATTGTT
GATTTTAACATGTCATCTGCTTTGACTCGACAAAGTTCCAAAATGTTTCATGCCAAAGAC
AAGCTACAACACAAGAGCCAGCCATGTGGATTACTAAAAGATGTTGGCTTAGTAAAAGAG
GAAGTAGATGTGGCAGTCATAACTGCCGCAGAATGTTTAAAAGAAGAGGGCAAGACAAGT
GCTTTGACCTGCAGCCTTCCGAAAAATGAAGATTTATGCTTAAATGATTCAAATTCAAGA
GATGAAAATTTCAAATTACCTGACTTTTCCTTTCAGGAAGATAAGACTGTTATAAAACAA
TCTGCACAAGAAGACTCAAAAAGTTTAGACCTTAAGGATAATGATGTAATCCAAGATTCC
TCTTCAGCTTTACATGTTTCCAGTAAAGATGTGCCGTCCTCATTGTCCTGTCTTCCTGCG
TCTGGGTCTATGTGTGGATCATTAATTGAAAGTAAAGCACGGGGTGATTTTTTACCTCAG
CATGAACATAAAGATAATATACAAGATGCAGTGACTATACATGAAGAAATACAGAACAGT
GTTGTTCTAGGTGGGGAACCATTCAAAGAGAATGATCTTTTGAAACAGGAAAAATGTAAA
AGCATACTCCTTCAGTCATTAATTGAAGGGATGGAAGACAGAAAGATAGATCCTGACCAG
ACAGTAATCAGAGCTGAGTCTTTGGATGGTGGTGACACCAGTTCTACAGTTGTAGAATCT
CAAGAGGGGCTTTCTGGCACTCATGTCCCAGAGTCTTCTGATTGTTGTGAAGGTTTTATT
AATACTTTTTCAAGCAATGATATGGATGGGCAAGACTTAGATTACTTTAATATTGATGAA
GGCGCAAAAAGTGGCCCACTAATTAGTGATGCTGAACTTGATGCCTTTCTGACAGAACAG
TATCTTCAGACCACTAACATAAAGTCTTTTGAAGAAAATGTAAATGACTCTAAATCGCAA
ATGAATCAGATAGATATGAAAGGCTTAGATGATGGAAACATCAATAATATATATTTCAAT
GCAGAAGCAGGAGCTATTGGGGAAAGTCATGGTATTAATATAATTTGTGAAACAGTTGAT
AAACAAAATACAATAGAAAATGGCCTTTCTTTAGGAGAAAAAAGCACTATTCCAGTTCAA
CAAGGGTTACCTACCAGTAAGTCTGAGATTACAAATCAATTATCAGTCTCTGATATTAAC
AGTCAATCTGTTGGAGGGGCCAGACCTAAGCAATTGTTTAGCCTTCCATCAAGAACAAGG
AGTTCAAAGGACCTGAATAAGCCAGATGTTCCAGATACAATAGAAAGTGAACCCAGCACA
GCAGATACCGTTGTTCCAATCACTTGTGCTATAGATTCTACAGCTGATCCACAGGTTAGC
TTCAACTCTAATTACATTGATATAGAAAGTAATTCTGAAGGTGGATCTAGTTTCGTAACT
GCAAATGAAGATTCTGTACCTGAAAACACTTGCAAAGAAGGCTTGGTTTTGGGCCAGAAA
CAGCCTACTTGGGTTCCTGATTCAGAAGCTCCAAACTGTATGAACTGCCAAGTCAAATTT
ACTTTTACCAAACGGCGACACCATTGCCGAGCATGTGGGAAAGTATTTTGTGGTGTCTGT
TGTAATAGGAAGTGTAAACTGCAATATCTAGAAAAGGAAGCAAGAGTATGTGTAGTCTGC
TATGAAACTATTAGTAAAGCTCAGGCATTTGAAAGGATGATGAGTCCAACTGGTTCTAAT
CTTAAGTCTAATCATTCTGATGAATGTACTACTGTCCAGCCTCCTCAGGAGAACCAAACA
TCCAGTATACCTTCACCAGCAACTTTGCCAGTCTCAGCACTTAAACAACCAGGTGTTGAA
GGACTATGTTCCAAAGAACAGAAGAGAGTATGGTTTGCAGATGGTATATTGCCCAATGGT
GAAGTTGCAGATACAACAAAATTATCATCTGGAAGTAAAAGATGTTCTGAAGACTTTAGT
CCTCTCTCACCTGATGTGCCTATGACAGTAAACACAGTGGATCATTCCCATTCTACTACA
GTGGAAAAGCCAAACAATGAGACAGGAGATATTACAAGAAATGAGATAATTCAGAGTCCT
ATTTCTCAGGTTCCATCAGTGGAAAAATTGTCTATGAACACAGGAAATGAGGGGTTACCT
ACTTCTGGTTCATTTACACTAGATGATGATGTTTTTGCAGAAACTGAAGAACCATCTAGT
CCTACTGGTGTCTTAGTTAACAGCAATTTACCTATTGCTAGTATTTCAGATTATAGGTTA
CTGTGTGATATTAACAAGTATGTCTGCAATAAGATTAGTCTTCTACCTAATGATGAGGAC
AGTTTGCCCCCACTTCTGGTTGCATCTGGAGAAAAGGGATCAGTGCCTGTAGTAGAAGAA
CATCCATCTCATGAGCAGATCATTTTGCTTCTTGAAGGTGAAGGCTTTCATCCTGTTACA
TTTGTCCTAAATGCTAATCTACTCGTGAATGTCAAATTCATATTTTATTCCTCAGACAAA
TATTGGTACTTTTCAACCAATGGATTGCATGGCTTGGGACAGGCAGAAATTATTATTCTA
TTGTTATGTTTGCCAAATGAAGATACTATTCCTAAGGACATCTTCAGACTATTTATCACC
ATATATAAGGATGCTCTAAAAGGAAAATACATAGAAAACTTGGACAATATTACCTTTACT
GAGAGTTTTCTCAGTAGCAAGGATCACGGAGGATTCCTGTTTATTACACCTACTTTTCAG
AAACTTGATGATCTCTCATTACCAAGTAATCCTTTTCTTTGTGGAATTCTTATCCAGAAG
CTTGAGATTCCCTGGGCAAAGGTTTTTCCTATGCGTTTAATGTTGAGATTGGGTGCAGAA
TATAAAGCATATCCTGCTCCTCTAACAAGCATCAGAGGCCGAAAACCTCTTTTTGGAGAA
ATAGGACACACTATTATGAACTTACTTGTTGACCTTCGAAATTACCAGTATACCTTGCAT
AATATAGATCAACTGTTGATTCATATGGAAATGGGAAAAAGCTGCATAAAAATACCACGG
AAAAAGTACAGTGATGTAATGAAAGTACTAAATTCTTCCAATGAGCATGTCATTAGCATT
GGAGCAAGTTTCAGTACAGAAGCAGATTCTCATCTAGTCTGTATACAGAATGATGGAATT
TATGAAACACAGGCCAACAGTGCCACTGGCCATCCTAGAAAAGTGACAGGTGCAAGTTTT
GTGGTATTCAATGGAGCTCTAAAAACATCTTCAGGATTTCTTGCTAAGTCCAGCATAGTT
GAAGATGGCTTAATGGTACAAATAACTCCAGAGACCATGAATGGCTTGCGGCTAGCTTTA
CGAGAACAGAAAGACTTTAAAATTACATGTGGGAAAGTTGATGCAGTAGACCTGAGAGAA
TACGTGGATATCTGCTGGGTAGATGCTGAAGAAAAAGGAAACAAAGGAGTTATCAGTTCA
GTGGATGGAATATCATTACAAGGATTTCCAAGTGAAAAAATAAAACTGGAAGCAGATTTT
GAAACCGATGAGAAGATTGTAAAATGTACCGAGGTGTTCTACTTTCTAAAGGACCAGGAT
TTATCTATTTTATCAACTTCTTATCAGTTTGCAAAAGAAATAGCCATGGCTTGTAGTGCT
GCGCTGTGCCCTCACCTGAAAACTCTAAAAAGTAATGGGATGAATAAAATTGGACTCAGA
GTTTCCATTGACACTGATATGGTTGAATTTCAGGCAGGATCTGAAGGCCAACTTCTGCCT
CAGCATTATCTAAATGATCTTGATAGTGCTCTGATACCTGTGATCCATGGTGGGACCTCC
AACTCTAGTTTACCATTAGAAATAGAATTAGTGTTTTTCATTATAGAACATCTTTTTTTG
Protein sequence predicted based on nucleotide sequence
MDSYFKAAVSDLDKLLDDFEQNPDEQDYLQDVQNAYDSNHCSVSSELASSQRTSLLPKDQ ECVNSCASSETSYGTNESSLNEKTLKGLTSIQNEKNVTGLDLLSSVDGGTSDEIQPLYMG RCSKPICDLISDMGNLVHATNSEEDIKKLLPDDFKSNADSLIGLDLSSVSDTPCVSSTDH DSDTVREQQNDISSELQNREIGGIKELGIKVDTTLSDSYNYSGTENLKDKKIFNQLESIV DFNMSSALTRQSSKMFHAKDKLQHKSQPCGLLKDVGLVKEEVDVAVITAAECLKEEGKTS ALTCSLPKNEDLCLNDSNSRDENFKLPDFSFQEDKTVIKQSAQEDSKSLDLKDNDVIQDS SSALHVSSKDVPSSLSCLPASGSMCGSLIESKARGDFLPQHEHKDNIQDAVTIHEEIQNS VVLGGEPFKENDLLKQEKCKSILLQSLIEGMEDRKIDPDQTVIRAESLDGGDTSSTVVES QEGLSGTHVPESSDCCEGFINTFSSNDMDGQDLDYFNIDEGAKSGPLISDAELDAFLTEQ YLQTTNIKSFEENVNDSKSQMNQIDMKGLDDGNINNIYFNAEAGAIGESHGINIICETVD KQNTIENGLSLGEKSTIPVQQGLPTSKSEITNQLSVSDINSQSVGGARPKQLFSLPSRTR SSKDLNKPDVPDTIESEPSTADTVVPITCAIDSTADPQVSFNSNYIDIESNSEGGSSFVT ANEDSVPENTCKEGLVLGQKQPTWVPDSEAPNCMNCQVKFTFTKRRHHCRACGKVFCGVC CNRKCKLQYLEKEARVCVVCYETISKAQAFERMMSPTGSNLKSNHSDECTTVQPPQENQT SSIPSPATLPVSALKQPGVEGLCSKEQKRVWFADGILPNGEVADTTKLSSGSKRCSEDFS PLSPDVPMTVNTVDHSHSTTVEKPNNETGDITRNEIIQSPISQVPSVEKLSMNTGNEGLP TSGSFTLDDDVFAETEEPSSPTGVLVNSNLPIASISDYRLLCDINKYVCNKISLLPNDED SLPPLLVASGEKGSVPVVEEHPSHEQIILLLEGEGFHPVTFVLNANLLVNVKFIFYSSDK YWYFSTNGLHGLGQAEIIILLLCLPNEDTIPKDIFRLFITIYKDALKGKYIENLDNITFT ESFLSSKDHGGFLFITPTFQKLDDLSLPSNPFLCGILIQKLEIPWAKVFPMRLMLRLGAE YKAYPAPLTSIRGRKPLFGEIGHTIMNLLVDLRNYQYTLHNIDQLLIHMEMGKSCIKIPR KKYSDVMKVLNSSNEHVISIGASFSTEADSHLVCIQNDGIYETQANSATGHPRKVTGASF VVFNGALKTSSGFLAKSSIVEDGLMVQITPETMNGLRLALREQKDFKITCGKVDAVDLRE YVDICWVDAEEKGNKGVISSVDGISLQGFPSEKIKLEADFETDEKIVKCTEVFYFLKDQD LSILSTSYQFAKEIAMACSAALCPHLKTLKSNGMNKIGLRVSIDTDMVEFQAGSEGQLLP QHYLNDLDSALIPVIHGGTSNSSLPLEIELVFFIIEHLFL
Coding Sequence Details
Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None
Recommended Growth Condition:
Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:
bacterial
Marker:
ampicillin
Bacterial Selection Condition:
100 ug/mL ampicillin
Growth Condition:
Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:
Commonly used conditions for ampicillin resistant plasmid clones.
Protein Expression Results:
None
Recommended expression in:
Not Applicable
Vector Name:
pJFT7_nHalo_DC(r4)
Synonyms:
''
Description:
In vitro expression vector with a T7 promoter and N-terminal TEV-cleavable Halo tag; ampicillin resistance in bacteria; Gateway or Flexi cloning compatible
Comments:
One in a series of pJFT7 vectors made by J. Saul for IVTT protein expression at CPD. This vector has been modified to improve sequencing the insert with a reverse primer.
Size (bp):
6140
Parent Vector:
None
Properties:
Gateway, acceptor (destination), in vitro transcription, recombinational cloning, with tag/fusion/marker
Author Name:
Arizona State University
Joshua LaBaer
Ji Qiu
Justin Saul
Fernanda Festa
Andrea Throop
Center for Personalized Diagnostics
Joshua LaBaer
Ji Qiu
Justin Saul
Fernanda Festa
Andrea Throop
Center for Personalized Diagnostics
Publications:
None
Vector Map:
Vector Sequence:
Sequence:
Vector Features:
Type
Name
Description
Start
End
bacterial origin
ColE
ColE1 origin
3425
4107
death cassette
ccdB
ccdB death cassette (removed in plasmids containing a gene insert)
2785
2994
enhancer
CITE
CITE enhancer
17
515
protease cleavage site
TEV
TEV protease cleavage site
1422
1442
recombination site
attR1
attR1 recombination site
1458
1474
recombination site
attR2
recombination site
3145
3160
selectable marker
AmpR
ampicillin resistance
4205
4864
selectable marker
CmR
chloramphenicol resistance (removed in clones containing a gene insert)
1691
2347
ssDNA origin
f1
f1 origin
5633
5939
tag
HALO
N-terminal HALO tag
522
1409
