Gene:
Gene Symbol:
Gene Name:
Original Clone ID:
None
Keyword:
None
Species:
Homo sapiens
Type:
cDNA
Vector Name:
pJFT7_nHalo_DC(r4)
Format:
CLOSED (STOP codon in vector)
Source:
Center for Personalized Diagnostics
Description:
None
Comments:
None
Mutation / Discrepancy:
No / No
Publications:
None
Authors:
Center for Personalized Diagnostics
HsCD00946699
Price:
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AVAILABLE
No restriction
Special MTA: HALO
Special MTA: HALO
Insert sequence: 2775nts
Open reading frame: 63 to 2837
CGTGCACCTGAGACCCGACGCCCGGGGTCCTCGAAGACGCGTCCGCCGCCGTGCCCGTCG
CCATGAACCGCTTCAGGGTGTCCAAGTTCCGGCACACCGAGGCTCGGCCGCCCCGCCGCG
AGTCCTGGATCAGTGACATTCGAGCAGGAACCGCCCCTTCATGCAGGAACCACATCAAAT
CAAGCTGCAGCTTGATCGCCTTCAACTCCGACCGTCCTGGTGTACTGGGCATTGTGCCTC
TGCAAGGCCAAGGAGAGGACAAGCGACGCGTGGCCCACCTGGGCTGCCATTCAGACCTAG
TCACCGACTTGGACTTCTCGCCCTTTGATGACTTCCTCCTGGCCACAGGCTCGGCTGACA
GGACGGTAAAACTCTGGCGACTGCCAGGGCCTGGCCAGGCCCTGCCCTCAGCACCCGGGG
TGGTGCTGGGCCCCGAGGACCTCCCAGTGGAGGTACTGCAGTTCCACCCCACCTCTGACG
GCATTCTGGTGAGCGCAGCAGGCACCACTGTGAAGGTCTGGGACGCAGCCAAGCAGCAGC
CCCTGACAGAGCTGGCAGCCCATGGGGACCTGGTGCAGAGCGCCGTCTGGAGCCGAGATG
GAGCCCTGGTGGGCACGGCGTGCAAGGACAAGCAGCTGCGGATCTTTGACCCCAGAACAA
AGCCGCGGGCCTCTCAGAGCACGCAGGCCCATGAGAACAGCAGGGATAGCCGGCTGGCAT
GGATGGGCACCTGGGAGCACCTTGTGTCTACTGGATTCAACCAGATGCGTGAGCGCGAAG
TGAAGCTGTGGGACACGCGGTTCTTCTCCAGCGCCCTGGCCTCCCTCACCTTGGACACCT
CGCTTGGGTGTCTCGTGCCTCTGCTGGACCCTGACTCTGGGCTCCTGGTCCTGGCAGGAA
AGGGCGAGAGGCAGCTGTACTGTTACGAGGTGGTCCCGCAGCAGCCGGCGCTGAGCCCAG
TGACCCAGTGTGTCCTGGAGAGCGTGCTGCGTGGGGCTGCCCTTGTGCCCCGGCAGGCGC
TGGCCGTCATGAGCTGCGAGGTACTCCGCGTCCTACAGCTGAGCGACACAGCCATCGTGC
CCATCGGCTACCATGTGCCCCGCAAGGCTGTGGAGTTCCACGAGGACCTGTTCCCGGACA
CTGCCGGCTGTGTGCCTGCCACCGACCCCCATAGCTGGTGGGCTGGGGACAACCAGCAGG
TGCAGAAGGTCAGCCTCAACCCCGCCTGCCGGCCCCACCCGAGCTTCACTTCCTGTCTGG
TGCCCCCTGCGGAGCCCCTCCCTGACACAGCCCAGCCTGCGGTGATGGAGACACCCGTGG
GTGATGCAGACGCAAGCGAGGGTTTCTCTTCCCCTCCCAGTTCGCTGACCTCGCCCTCCA
CGCCCTCCAGCCTGGGGCCCTCACTCTCCAGCACCAGTGGCATCGGGACCAGCCCCAGTT
TGAGGTCGCTGCAGAGCCTGCTGGGCCCCAGTTCCAAGTTCCGCCATGCTCAGGGCACTG
TCCTGCACCGAGACAGCCACATCACCAACCTCAAGGGGCTCAACCTCACCACACCTGGTG
AGAGTGACGGCTTCTGTGCCAACAAGCTGCGTGTGGCCGTGCCGCTGCTCAGCAGCGGGG
GACAGGTGGCTGTGCTTGAGCTACGGAAGCCTGGCCGCCTGCCCGACACGGCACTGCCCA
CGCTGCAGAATGGGGCAGCTGTGACTGATCTGGCCTGGGACCCCTTTGACCCCCATCGCC
TCGCTGTGGCTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCCGCAGAGGGCCTGG
AAGAGGTGCTCACCACGCCAGAGACTGTGCTCACAGGCCACACGGAGAAGATCTGCTCCC
TGCGCTTCCACCCACTGGCAGCCAATGTGCTGGCCTCGTCCTCCTATGACCTCACTGTTC
GCATCTGGGACCTTCAGGCTGGAGCTGATCGGCTGAAGCTGCAGGGCCACCAAGACCAGA
TCTTCAGCCTGGCCTGGAGTCCTGATGGGCAGCAGCTGGCCACTGTCTGCAAGGATGGGC
GTGTGCGGGTCTACAGGCCCCGGAGTGGCCCTGAGCCCCTGCAGGAAGGCCCAGGGCCCA
AGGGAGGACGCGGAGCTCGCATTGTCTGGGTATGTGATGGTCGCTGTCTGCTGGTGTCTG
GCTTTGACAGCCAAAGTGAGCGCCAGCTGCTCCTATATGAAGCTGAGGCCCTGGCCGGCG
GACCCTTGGCAGTGTTGGGCCTGGACGTGGCTCCCTCAACCCTGCTGCCCAGCTACGACC
CAGACACTGGCCTGGTGCTCCTGACCGGCAAGGGCGACACCCGTGTATTCCTGTACGAGC
TGCTCCCCGAGTCCCCTTTCTTCCTGGAGTGCAACAGCTTCACGTCGCCTGACCCCCACA
AGGGCCTCGTCCTCCTGCCTAAGACGGAGTGCGACGTGCGGGAAGTGGAGCTGATGCGGT
GCCTGCGGCTGCGTCAGTCCTCCCTGGAGCCTGTGGCCTTCCGGCTGCCCCGAGTCCGGA
AAGAGTTCTTCCAGGATGACGTGTTCCCAGACACGGCTGTGATCTGGGAGCCTGTGCTCA
GTGCCGAGGCCTGGCTGCAAGGCGCTAATGGGCAGCCCTGGCTTCTCAGCCTGCAGCCTC
CTGACATGAGCCCAGTGAGCCAAGCCCCCCGAGAGGCCCCTGCTCGTCGGGCCCCATCCT
CAGCGCAGTACCTGGAAGAAAAGTCTGACCAGCAAAAGAAGGAGGAGCTGCTGAATGCCA
TGGTGGCAAAACTGGGGAACCGGGAGGACCCACTCCCCCAGGACTCCTTTGAAGGCGTGG
ACGAGGACGAGTGGGACTAGCCTGCGCCCCCGTCACCTCCACCTCACCTGTGCTGCCACT
TCCTAGTGCACACCTCACGGCTCATCCTCAAGCTGGAAGATACCTCTCTGGCCCCGGCAC
ATGTCACCCCTGCACTCCTGCCTTCCCGTGGGCACTTCCACATCCTCTGGGCCTCTGGCA
GTTCCCAGGGACTGTTTTCACCTCTGCTGTCTCTGGGGTCAGCTGCTGCTCATCAGCTGC
CCGCTAGCATGTGGCCAGGGGTGCAGGGTGGCGGGGGGTCAGCAGCATGTCCCTGGGCAG
GCCCTGGGCACCCTGTCTCCCCTGGTCTCACTGCTGACCTGGGCTGGTCCCAGCCTGGAT
TGGCCTCATCCAGGATCTTTGGTCACCCCACGCT
Protein sequence predicted based on nucleotide sequence
MNRFRVSKFRHTEARPPRRESWISDIRAGTAPSCRNHIKSSCSLIAFNSDRPGVLGIVPL QGQGEDKRRVAHLGCHSDLVTDLDFSPFDDFLLATGSADRTVKLWRLPGPGQALPSAPGV VLGPEDLPVEVLQFHPTSDGILVSAAGTTVKVWDAAKQQPLTELAAHGDLVQSAVWSRDG ALVGTACKDKQLRIFDPRTKPRASQSTQAHENSRDSRLAWMGTWEHLVSTGFNQMREREV KLWDTRFFSSALASLTLDTSLGCLVPLLDPDSGLLVLAGKGERQLYCYEVVPQQPALSPV TQCVLESVLRGAALVPRQALAVMSCEVLRVLQLSDTAIVPIGYHVPRKAVEFHEDLFPDT AGCVPATDPHSWWAGDNQQVQKVSLNPACRPHPSFTSCLVPPAEPLPDTAQPAVMETPVG DADASEGFSSPPSSLTSPSTPSSLGPSLSSTSGIGTSPSLRSLQSLLGPSSKFRHAQGTV LHRDSHITNLKGLNLTTPGESDGFCANKLRVAVPLLSSGGQVAVLELRKPGRLPDTALPT LQNGAAVTDLAWDPFDPHRLAVAGEDARIRLWRVPAEGLEEVLTTPETVLTGHTEKICSL RFHPLAANVLASSSYDLTVRIWDLQAGADRLKLQGHQDQIFSLAWSPDGQQLATVCKDGR VRVYRPRSGPEPLQEGPGPKGGRGARIVWVCDGRCLLVSGFDSQSERQLLLYEAEALAGG PLAVLGLDVAPSTLLPSYDPDTGLVLLTGKGDTRVFLYELLPESPFFLECNSFTSPDPHK GLVLLPKTECDVREVELMRCLRLRQSSLEPVAFRLPRVRKEFFQDDVFPDTAVIWEPVLS AEAWLQGANGQPWLLSLQPPDMSPVSQAPREAPARRAPSSAQYLEEKSDQQKKEELLNAM VAKLGNREDPLPQDSFEGVDEDEWD
Coding Sequence Details
Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None
Recommended Growth Condition:
Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:
bacterial
Marker:
ampicillin
Bacterial Selection Condition:
100 ug/mL ampicillin
Growth Condition:
Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:
Commonly used conditions for ampicillin resistant plasmid clones.
Protein Expression Results:
None
Recommended expression in:
Not Applicable
Vector Name:
pJFT7_nHalo_DC(r4)
Synonyms:
''
Description:
In vitro expression vector with a T7 promoter and N-terminal TEV-cleavable Halo tag; ampicillin resistance in bacteria; Gateway or Flexi cloning compatible
Comments:
One in a series of pJFT7 vectors made by J. Saul for IVTT protein expression at CPD. This vector has been modified to improve sequencing the insert with a reverse primer.
Size (bp):
6140
Parent Vector:
None
Properties:
Gateway, acceptor (destination), in vitro transcription, recombinational cloning, with tag/fusion/marker
Author Name:
Arizona State University
Joshua LaBaer
Ji Qiu
Justin Saul
Fernanda Festa
Andrea Throop
Center for Personalized Diagnostics
Joshua LaBaer
Ji Qiu
Justin Saul
Fernanda Festa
Andrea Throop
Center for Personalized Diagnostics
Publications:
None
Vector Map:
Vector Sequence:
Sequence:
Vector Features:
Type
Name
Description
Start
End
bacterial origin
ColE
ColE1 origin
3425
4107
death cassette
ccdB
ccdB death cassette (removed in plasmids containing a gene insert)
2785
2994
enhancer
CITE
CITE enhancer
17
515
protease cleavage site
TEV
TEV protease cleavage site
1422
1442
recombination site
attR1
attR1 recombination site
1458
1474
recombination site
attR2
recombination site
3145
3160
selectable marker
AmpR
ampicillin resistance
4205
4864
selectable marker
CmR
chloramphenicol resistance (removed in clones containing a gene insert)
1691
2347
ssDNA origin
f1
f1 origin
5633
5939
tag
HALO
N-terminal HALO tag
522
1409
