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Collection: S4

Description: S4 RNA-binding domain
Total number of clones in the collection: 122
Use Restriction: No restriction

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List of clones:

Explanation of Terms
  Clone ID Clone
Type
Gene
Symbol
Gene
Name
Keywords Reference
Sequence
Mutation/
Discrepancy
Insert
Format
Vector Selection
Markers
 
1 HsCD00004054 Plasmid Details cDNA RPS9 ribosomal protein S9 NA BC007857 No/No FUSION pDNR-Dual bacterial: ampicillin
2 HsCD00004055 Plasmid Details cDNA RPS9 ribosomal protein S9 NA BC007857 No/No CLOSED pDNR-Dual bacterial: ampicillin
3 PaCD00006339 Plasmid Details cDNA NA probable pseudouridylate synthase NA NP_249424 No/Yes FUSION pDONR201 bacterial: kanamycin
4 PaCD00006511 Plasmid Details cDNA NA hypothetical protein NA NP_249801 No/Yes FUSION pDONR201 bacterial: kanamycin
5 PaCD00007300 Plasmid Details cDNA rluC ribosomal large subunit pseudouridine synthase C NA NP_251665 No/No FUSION pDONR201 bacterial: kanamycin
6 PaCD00007838 Plasmid Details cDNA rpsD 30S ribosomal protein S4 NA NP_252929 No/Yes FUSION pDONR201 bacterial: kanamycin
7 ScCD00009900 Plasmid Details cDNA IMP3 Component of the SSU processome, which is required for pre-18S rRNA processing, essential protein that interacts with Mpp10p and mediates interactions of Imp4p and Mpp10p with U3 snoRNA NA AAB68981 No/No CLOSED pDONR201 bacterial: kanamycin
8 ScCD00012385 Plasmid Details cDNA IMP3 Component of the SSU processome, which is required for pre-18S rRNA processing, essential protein that interacts with Mpp10p and mediates interactions of Imp4p and Mpp10p with U3 snoRNA NA AAB68981 No/No CLOSED pBY011 yeast: URA
9 ScCD00012670 Plasmid Details cDNA NAM9 putative mitochondrial S4 ribosomal protein NA CAA96019 No/No CLOSED pDONR221 bacterial: kanamycin
10 YpCD00013694 Plasmid Details cDNA NA hypothetical protein NA NP_669367 No/No CLOSED pDONR221 bacterial: kanamycin
11 YpCD00013786 Plasmid Details cDNA sfhB suppressor of ftsH mutation NA NP_668243 No/No CLOSED pDONR221 bacterial: kanamycin
12 YpCD00014081 Plasmid Details cDNA tyrS tyrosine tRNA synthetase NA NP_669281 No/No CLOSED pDONR221 bacterial: kanamycin
13 YpCD00015396 Plasmid Details cDNA rsuA 16S pseudouridylate 516 synthase NA NP_670217 No/No CLOSED pDONR221 bacterial: kanamycin
14 YpCD00015465 Plasmid Details cDNA rpsD 30S ribosomal subunit protein S4 NA NP_671307 No/No CLOSED pDONR221 bacterial: kanamycin
15 YpCD00015599 Plasmid Details cDNA NA hypothetical protein NA NP_669067 No/No CLOSED pDONR221 bacterial: kanamycin
16 YpCD00015958 Plasmid Details cDNA NA hypothetical protein NA NP_671213 No/No CLOSED pDONR221 bacterial: kanamycin
17 VcCD00017349 Plasmid Details cDNA tyrS-1 tyrosyl-tRNA synthetase NA NP_230119 No/No FUSION pDONR221 bacterial: kanamycin
18 VcCD00017427 Plasmid Details cDNA rpsD ribosomal protein S4 NA NP_232200 No/No FUSION pDONR221 bacterial: kanamycin
19 VcCD00017481 Plasmid Details cDNA NA pseudouridine synthase family 1 protein NA NP_230824 No/No FUSION pDONR221 bacterial: kanamycin
20 VcCD00017484 Plasmid Details cDNA rluD ribosomal large subunit pseudouridine synthase D NA NP_230358 No/No FUSION pDONR221 bacterial: kanamycin
21 VcCD00018992 Plasmid Details cDNA NA conserved hypothetical protein NA NP_232361 No/No FUSION pDONR221 bacterial: kanamycin
22 VcCD00019119 Plasmid Details cDNA rluC ribosomal large subunit pseudouridine synthase C NA NP_231662 No/No FUSION pDONR221 bacterial: kanamycin
23 VcCD00019901 Plasmid Details cDNA NA ribosomal small subunit pseudouridine synthase A NA NP_231272 No/No FUSION pDONR221 bacterial: kanamycin
24 VcCD00020172 Plasmid Details cDNA tyrS-2 tyrosyl-tRNA synthetase NA NP_230280 No/No FUSION pDONR221 bacterial: kanamycin
25 FtCD00020344 Plasmid Details cDNA rluC ribosomal large subunit pseudouridine synthase C NA YP_169130 No/Yes CLOSED pDONR221 bacterial: kanamycin
26 FtCD00020789 Plasmid Details cDNA rluB ribosomal large subunit pseudouridine synthase B NA YP_170037 No/Yes CLOSED pDONR221 bacterial: kanamycin
27 FtCD00020988 Plasmid Details cDNA rluD ribosomal large subunit pseudouridine synthase D NA YP_170203 No/No CLOSED pDONR221 bacterial: kanamycin
28 FtCD00021070 Plasmid Details cDNA rpsD 30S ribosomal protein S4 NA YP_169398 No/No CLOSED pDONR221 bacterial: kanamycin
29 FtCD00022829 Plasmid Details cDNA tyrS Tyrosyl-tRNA synthetase NA YP_169707 No/No CLOSED pDONR221 bacterial: kanamycin
30 YsCD00025194 Plasmid Details cDNA NA hypothetical protein NA YP_069597 No/No CLOSED pDONR221 bacterial: kanamycin
31 VcCD00025798 Plasmid Details cDNA NA pseudouridine synthase family 1 protein NA NP_231854 No/No FUSION pDONR221 bacterial: kanamycin
32 VcCD00026607 Plasmid Details cDNA rpsD ribosomal protein S4 NA NP_232200 No/No FUSION pANT7_cGST bacterial: ampicillin
33 VcCD00026814 Plasmid Details cDNA NA conserved hypothetical protein NA NP_232361 No/No FUSION pANT7_cGST bacterial: ampicillin
34 VcCD00027236 Plasmid Details cDNA tyrS-2 tyrosyl-tRNA synthetase NA NP_230280 No/No FUSION pANT7_cGST bacterial: ampicillin
35 VcCD00027414 Plasmid Details cDNA tyrS-1 tyrosyl-tRNA synthetase NA NP_230119 No/No FUSION pANT7_cGST bacterial: ampicillin
36 VcCD00034073 Plasmid Details cDNA rluD ribosomal large subunit pseudouridine synthase D NA NP_230358 No/No FUSION pANT7_cGST bacterial: ampicillin
37 VcCD00035038 Plasmid Details cDNA NA pseudouridine synthase family 1 protein NA NP_230824 No/No FUSION pANT7_cGST bacterial: ampicillin
38 FtCD00035670 Plasmid Details cDNA rluB ribosomal large subunit pseudouridine synthase B NA YP_170037 No/Yes CLOSED pBY011_GFP-NH3_CN yeast: URA
39 FtCD00035688 Plasmid Details cDNA rluD ribosomal large subunit pseudouridine synthase D NA YP_170203 No/No CLOSED pBY011_GFP-NH3_CN yeast: URA
40 VcCD00036465 Plasmid Details cDNA NA ribosomal small subunit pseudouridine synthase A NA NP_231272 No/No FUSION pANT7_cGST bacterial: ampicillin
41 FtCD00036680 Plasmid Details cDNA rpsD 30S ribosomal protein S4 NA YP_169398 No/No CLOSED pBY011_GFP-NH3_CN yeast: URA
42 FtCD00036742 Plasmid Details cDNA hslR heat shock protein 15 (HSP15) NA YP_169750 No/Yes CLOSED pBY011_GFP-NH3_CN yeast: URA
43 FtCD00037565 Plasmid Details cDNA tyrS Tyrosyl-tRNA synthetase NA YP_169707 No/No CLOSED pBY011_GFP-NH3_CN yeast: URA
44 FtCD00037595 Plasmid Details cDNA rluC ribosomal large subunit pseudouridine synthase C NA YP_169130 No/Yes CLOSED pBY011_GFP-NH3_CN yeast: URA
45 HsCD00040069 Plasmid Details cDNA RPS9 ribosomal protein S9 NA BC000802 No/No FUSION pDONR221 bacterial: kanamycin
46 HsCD00040565 Plasmid Details cDNA RPS4Y1 ribosomal protein S4, Y-linked 1 NA BC010286 No/No FUSION pDONR221 bacterial: kanamycin
47 HsCD00040698 Plasmid Details cDNA RPS4X ribosomal protein S4, X-linked NA BC000472 No/No FUSION pDONR221 bacterial: kanamycin
48 HsCD00043217 Plasmid Details cDNA RPS9 ribosomal protein S9 NA BC000802 No/No CLOSED pDONR221 bacterial: kanamycin
49 HsCD00043680 Plasmid Details cDNA RPS4Y1 ribosomal protein S4, Y-linked 1 NA BC010286 No/No CLOSED pDONR221 bacterial: kanamycin
50 HsCD00045613 Plasmid Details cDNA RPS4X ribosomal protein S4, X-linked NA BC000472 No/No CLOSED pDONR221 bacterial: kanamycin
51 FtCD00062182 Plasmid Details cDNA rluC ribosomal large subunit pseudouridine synthase C NA YP_169130 No/Yes CLOSED pDEST17 bacterial: ampicillin
52 FtCD00062435 Plasmid Details cDNA rluB ribosomal large subunit pseudouridine synthase B NA YP_170037 No/Yes CLOSED pDEST17 bacterial: ampicillin
53 FtCD00062457 Plasmid Details cDNA rpsD 30S ribosomal protein S4 NA YP_169398 No/No CLOSED pDEST17 bacterial: ampicillin
54 FtCD00062515 Plasmid Details cDNA rluD ribosomal large subunit pseudouridine synthase D NA YP_170203 No/No CLOSED pDEST17 bacterial: ampicillin
55 FtCD00062886 Plasmid Details cDNA tyrS Tyrosyl-tRNA synthetase NA YP_169707 No/No CLOSED pDEST17 bacterial: ampicillin
56 FtCD00063683 Plasmid Details cDNA rluB ribosomal large subunit pseudouridine synthase B NA YP_170037 No/Yes CLOSED pDEST17 bacterial: ampicillin
57 FtCD00063701 Plasmid Details cDNA rluD ribosomal large subunit pseudouridine synthase D NA YP_170203 No/No CLOSED pDEST17 bacterial: ampicillin
58 BaCD00065119 Plasmid Details cDNA tyrS-2 tyrosyl-tRNA synthetase NA NP_847490 No/No FUSION pDONR221 bacterial: kanamycin
59 BaCD00065594 Plasmid Details cDNA tyrS-1 tyrosyl-tRNA synthetase NA NP_847109 No/No FUSION pDONR221 bacterial: kanamycin
60 BaCD00065610 Plasmid Details cDNA rpsD ribosomal protein S4 NA NP_847106 No/Yes FUSION pDONR221 bacterial: kanamycin
61 BaCD00066853 Plasmid Details cDNA NA S4 domain protein NA NP_846276 No/No FUSION pDONR221 bacterial: kanamycin
62 BaCD00069995 Plasmid Details cDNA tyrS-2 tyrosyl-tRNA synthetase NA NP_847490 No/No FUSION pANT7_cGST bacterial: ampicillin
63 BaCD00070842 Plasmid Details cDNA tyrS-1 tyrosyl-tRNA synthetase NA NP_847109 No/No FUSION pANT7_cGST bacterial: ampicillin
64 BaCD00070861 Plasmid Details cDNA rpsD ribosomal protein S4 NA NP_847106 No/Yes FUSION pANT7_cGST bacterial: ampicillin
65 BaCD00072255 Plasmid Details cDNA NA S4 domain protein NA NP_846276 No/No FUSION pANT7_cGST bacterial: ampicillin
66 HsCD00075666 Plasmid Details cDNA RPS9 ribosomal protein S9 NA BC007857 No/No CLOSED pJP1520 mammalian: puromycin
67 HsCD00075667 Plasmid Details cDNA RPS9 ribosomal protein S9 NA BC007857 No/No CLOSED pJP1520 mammalian: puromycin
68 HsCD00081679 Plasmid Details cDNA C15orf12 chromosome 15 open reading frame 12 NA AL136913 No/No FUSION pDONR201 bacterial: kanamycin
69 TmCD00084833 Plasmid Details cDNA TM0223 hypothetical protein NA NP_228038 No/No CLOSED pMH1 bacterial: ampicillin
70 TmCD00084886 Plasmid Details cDNA TM0940 ribosomal large subunit pseudouridine synthase C NA NP_228748 No/No CLOSED pMH1 bacterial: ampicillin
71 TmCD00084991 Plasmid Details cDNA TM0462 hypothetical protein NA NP_228272 No/Yes CLOSED pMH1 bacterial: ampicillin
72 TmCD00085050 Plasmid Details cDNA TM1576 hemolysin NA NP_229376 No/No CLOSED pMH1 bacterial: ampicillin
73 TmCD00089439 Plasmid Details cDNA rpsD 30S ribosomal protein S4 NA NP_229273 No/No CLOSED pMH1 bacterial: ampicillin
74 MmCD00089577 Plasmid Details cDNA NA NA NA AAH09100 No/No CLOSED pMH4 bacterial: ampicillin
75 MmCD00089798 Plasmid Details cDNA NA NA NA AAH09100 No/No CLOSED pMH4 bacterial: ampicillin
76 MmCD00089852 Plasmid Details cDNA NA NA NA AAH09100 No/No CLOSED pMH4 bacterial: ampicillin
77 SsCD00092469 Plasmid Details cDNA NA NA NA No/No CLOSED pSpeedET bacterial: kanamycin
78 ScCD00096514 Plasmid Details cDNA NAM9 putative mitochondrial S4 ribosomal protein NA CAA96019 No/No CLOSED pBY011 yeast: URA
79 ScCD00097056 Plasmid Details cDNA RPS9A Homology to rat S9 and E.coli S4 NA AAB68268 No/No CLOSED pBY011 yeast: URA
80 ScCD00099417 Plasmid Details cDNA IMP3 Component of the SSU processome, which is required for pre-18S rRNA processing, essential protein that interacts with Mpp10p and mediates interactions of Imp4p and Mpp10p with U3 snoRNA NA AAB68981 No/No CLOSED ZM552 yeast: LEU2
81 ScCD00101653 Plasmid Details cDNA NAM9 putative mitochondrial S4 ribosomal protein NA CAA96019 No/No CLOSED ZM552 yeast: LEU2
82 ScCD00102161 Plasmid Details cDNA RPS9A Homology to rat S9 and E.coli S4 NA AAB68268 No/No CLOSED ZM552 yeast: LEU2
83 CgCD00104052 Plasmid Details cDNA NA NA NA NP_600630 No/No CLOSED pSpeedET bacterial: kanamycin
84 SmCD00104653 Plasmid Details cDNA NA NA NA NP_721016 No/Yes CLOSED pSpeedET bacterial: kanamycin
85 MmCD00281917 Plasmid Details cDNA NA NA NA AAH09100 No/No CLOSED pMH4 bacterial: ampicillin
86 MmCD00282119 Plasmid Details cDNA NA NA NA AAH09100 No/No CLOSED pMH4 bacterial: ampicillin
87 MmCD00282293 Plasmid Details cDNA NA NA NA AAH09100 No/No CLOSED pMH4 bacterial: ampicillin
88 BaCD00286315 Plasmid Details cDNA NA hemolysin A NA NP_846628 No/No FUSION pDONR221 bacterial: kanamycin
89 BaCD00286440 Plasmid Details cDNA NA S4 domain protein NA NP_842625 No/No FUSION pDONR221 bacterial: kanamycin
90 HsCD00313317 Plasmid Details cDNA IMP3 IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast) full-length cds AL136913 No/Yes CLOSED pDONR221 bacterial: kanamycin
91 BbCD00322152 Plasmid Details cDNA BAD_0911 NA full-length cds 3-251 of 251 aa No/No CLOSED pSGX3 bacterial: kanamycin
92 BbCD00326553 Plasmid Details cDNA rpsD NA SP or TM removed No/No FUSION pSpeedET bacterial: kanamycin
93 TeCD00331050 Plasmid Details cDNA tll1457 hemolysin-like protein full length protein truncation No/Yes FUSION pET21_NESG bacterial: ampicillin
94 TeCD00331051 Plasmid Details cDNA tll1457 hemolysin-like protein full length protein truncation No/Yes FUSION pET21_NESG bacterial: ampicillin
95 TeCD00331052 Plasmid Details cDNA tll1457 hemolysin-like protein full length protein truncation No/No FUSION pET21_NESG bacterial: ampicillin
96 BhCD00340324 Plasmid Details cDNA BH2778 hemolysin-like protein full length No/No CLOSED pMCSG19B bacterial: ampicillin
97 TaCD00342650 Plasmid Details cDNA NA NA NA No/Yes FUSION pET21_NESG bacterial: ampicillin
98 TvCD00342716 Plasmid Details cDNA NA NA NA No/No FUSION pET21_NESG bacterial: ampicillin
99 PfCD00342788 Plasmid Details cDNA NA NA NA No/No FUSION pET21_NESG bacterial: ampicillin
100 MjCD00344262 Plasmid Details cDNA NA NA NA No/No FUSION pET21_NESG bacterial: ampicillin
101 LmCD00369642 Plasmid Details cDNA lmo1366 hypothetical protein full-length cds AL591824 No/Yes CLOSED pSGX3 bacterial: kanamycin
102 TmCD00382434 Plasmid Details cDNA TM0264 16S pseudouridylate synthase full-length cds NP_228077 No/No CLOSED pMH2T7 bacterial: ampicillin
103 MtCD00385848 Plasmid Details cDNA NA NA NA No/No FUSION pET28-N-His-thromb bacterial: kanamycin
104 AtCD00396888 Plasmid Details cDNA AT5G15750 S4/Hsp/ tRNA synthetase RNA-binding domain-containing protein full-length cds No/Yes CLOSED pDONR221 bacterial: kanamycin
105 LiCD00398320 Plasmid Details cDNA lin1403 hypothetical protein partial cds No/No CLOSED pMCSG19B bacterial: ampicillin
106 PpCD00398435 Plasmid Details cDNA PEPE_0821 rRNA methylase full length No/No CLOSED pMCSG19B bacterial: ampicillin
107 HsCD00435563 Plasmid Details cDNA IMP3 IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast) NA AM393583 No/No FUSION pLX304 mammalian: blasticidin
108 HsCD00443374 Plasmid Details cDNA RPS4X ribosomal protein S4, X-linked NA DQ894924 No/No FUSION pLX304 mammalian: blasticidin
109 HsCD00443375 Plasmid Details cDNA RPS4Y1 ribosomal protein S4, Y-linked 1 NA DQ894791 No/No FUSION pLX304 mammalian: blasticidin
110 HsCD00506644 Plasmid Details cDNA IMP3 IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast) NA AM393583 No/No FUSION pENTR223 bacterial: spectinomycin
111 HsCD00508565 Plasmid Details cDNA RPS4X ribosomal protein S4, X-linked NA DQ894924 No/No FUSION pENTR223 bacterial: spectinomycin
112 HsCD00508566 Plasmid Details cDNA RPS4Y1 ribosomal protein S4, Y-linked 1 NA DQ894791 No/No FUSION pENTR223 bacterial: spectinomycin
113 MmCD00530501 Plasmid Details cDNA Rps4x ribosomal protein S4, X-linked full-length cds No/Yes CLOSED pMH4 bacterial: ampicillin
114 PpCD00531457 Plasmid Details cDNA PEPE_0821 rRNA methylase full-length cds No/No CLOSED pSpeedET bacterial: kanamycin
115 TaCD00539688 Plasmid Details cDNA Ta1259 30S ribosomal protein S4 NA No/No FUSION pET21_NESG bacterial: ampicillin
116 PfCD00539689 Plasmid Details cDNA PF1812 30S ribosomal protein S4 NA No/No FUSION pET21_NESG bacterial: ampicillin
117 MtCD00540887 Plasmid Details cDNA MTH15 30S ribosomal protein S4 NA No/No FUSION pET21_NESG bacterial: ampicillin
118 SmCD00545179 Plasmid Details cDNA SMc00904 hypothetical protein NA No/No CLOSED pNIC28-Bsa4 bacterial: kanamycin
119 MtCD00587591 Plasmid Details cDNA rpsD 30S ribosomal protein S4 RpsD NA No/No CLOSED pMCSG7 bacterial: ampicillin
120 PaCD00587601 Plasmid Details cDNA rpsD 30S ribosomal protein S4 NA No/No CLOSED pMCSG7 bacterial: ampicillin
121 SaCD00587607 Plasmid Details cDNA rpsD 30S ribosomal protein S4 NA No/No CLOSED pMCSG7 bacterial: ampicillin
122 SaCD00587612 Plasmid Details cDNA rpsD 30S ribosomal protein S4 NA No/No CLOSED pMCSG7 bacterial: ampicillin

 

      Explanation of Terms