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Collection: EAL

Description: Putative diguanylate phosphodiesterase
Total number of clones in the collection: 140
Use Restriction: No restriction

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List of clones:

Explanation of Terms
  Clone ID Clone
Type
Gene
Symbol
Gene
Name
Keywords Reference
Sequence
Mutation/
Discrepancy
Insert
Format
Vector Selection
Markers
 
1 PaCD00006943 Plasmid Details cDNA NA hypothetical protein NA NP_250823 No/No FUSION pDONR201 bacterial: kanamycin
2 PaCD00007723 Plasmid Details cDNA NA probable two-component response regulator NA NP_252636 No/Yes FUSION pDONR201 bacterial: kanamycin
3 YpCD00014573 Plasmid Details cDNA NA hypothetical protein NA NP_667546 No/No CLOSED pDONR221 bacterial: kanamycin
4 YpCD00015456 Plasmid Details cDNA rtn hypothetical protein NA NP_670209 No/Yes CLOSED pDONR221 bacterial: kanamycin
5 YpCD00016180 Plasmid Details cDNA NA hypothetical NA NP_668930 No/No CLOSED pDONR221 bacterial: kanamycin
6 YpCD00016855 Plasmid Details cDNA NA hypothetical NA NP_670688 No/No CLOSED pDONR221 bacterial: kanamycin
7 YpCD00016878 Plasmid Details cDNA NA hypothetical protein NA NP_671126 No/No CLOSED pDONR221 bacterial: kanamycin
8 YpCD00017009 Plasmid Details cDNA NA hypothetical protein NA NP_671134 No/No CLOSED pDONR221 bacterial: kanamycin
9 VcCD00017813 Plasmid Details cDNA NA conserved hypothetical protein NA NP_231485 No/No FUSION pDONR221 bacterial: kanamycin
10 VcCD00017922 Plasmid Details cDNA NA GGDEF family protein NA NP_233171 No/No FUSION pDONR221 bacterial: kanamycin
11 VcCD00018519 Plasmid Details cDNA NA conserved hypothetical protein NA NP_232502 No/Yes FUSION pDONR221 bacterial: kanamycin
12 VcCD00018530 Plasmid Details cDNA NA GGDEF family protein NA NP_232481 No/No FUSION pDONR221 bacterial: kanamycin
13 VcCD00018532 Plasmid Details cDNA NA conserved hypothetical protein NA NP_231232 No/No FUSION pDONR221 bacterial: kanamycin
14 VcCD00018967 Plasmid Details cDNA NA conserved hypothetical protein NA NP_233464 No/No FUSION pDONR221 bacterial: kanamycin
15 VcCD00019838 Plasmid Details cDNA NA GGDEF family protein NA NP_231568 No/No FUSION pDONR221 bacterial: kanamycin
16 VcCD00019908 Plasmid Details cDNA NA conserved hypothetical protein NA NP_231278 No/No FUSION pDONR221 bacterial: kanamycin
17 VcCD00019990 Plasmid Details cDNA NA c-di-GMP phosphodiesterase A-related protein NA NP_230302 No/No FUSION pDONR221 bacterial: kanamycin
18 VcCD00019994 Plasmid Details cDNA NA c-di-GMP phosphodiesterase A-related protein NA NP_230307 No/Yes FUSION pDONR221 bacterial: kanamycin
19 VcCD00020006 Plasmid Details cDNA NA GGDEF family protein NA NP_229788 No/No FUSION pDONR221 bacterial: kanamycin
20 VcCD00020015 Plasmid Details cDNA NA conserved hypothetical protein NA NP_230856 No/No FUSION pDONR221 bacterial: kanamycin
21 VcCD00020060 Plasmid Details cDNA NA conserved hypothetical protein NA NP_231346 No/No FUSION pDONR221 bacterial: kanamycin
22 VcCD00020069 Plasmid Details cDNA NA GGDEF family protein NA NP_232376 No/No FUSION pDONR221 bacterial: kanamycin
23 VcCD00020212 Plasmid Details cDNA NA response regulator NA NP_230731 No/No FUSION pDONR221 bacterial: kanamycin
24 VcCD00025512 Plasmid Details cDNA NA conserved hypothetical protein NA NP_229795 No/No FUSION pDONR221 bacterial: kanamycin
25 VcCD00025563 Plasmid Details cDNA NA conserved hypothetical protein NA NP_232926 No/No FUSION pDONR221 bacterial: kanamycin
26 VcCD00025727 Plasmid Details cDNA NA conserved hypothetical protein NA NP_230166 No/No FUSION pDONR221 bacterial: kanamycin
27 VcCD00026933 Plasmid Details cDNA NA conserved hypothetical protein NA NP_231485 No/No FUSION pANT7_cGST bacterial: ampicillin
28 VcCD00034424 Plasmid Details cDNA NA response regulator NA NP_230731 No/No FUSION pANT7_cGST bacterial: ampicillin
29 VcCD00034879 Plasmid Details cDNA NA GGDEF family protein NA NP_233171 No/No FUSION pANT7_cGST bacterial: ampicillin
30 VcCD00034950 Plasmid Details cDNA NA conserved hypothetical protein NA NP_231346 No/No FUSION pANT7_cGST bacterial: ampicillin
31 VcCD00034957 Plasmid Details cDNA NA GGDEF family protein NA NP_232376 No/No FUSION pANT7_cGST bacterial: ampicillin
32 VcCD00035209 Plasmid Details cDNA NA conserved hypothetical protein NA NP_233464 No/No FUSION pANT7_cGST bacterial: ampicillin
33 VcCD00035348 Plasmid Details cDNA NA c-di-GMP phosphodiesterase A-related protein NA NP_230302 No/No FUSION pANT7_cGST bacterial: ampicillin
34 VcCD00035361 Plasmid Details cDNA NA GGDEF family protein NA NP_229788 No/No FUSION pANT7_cGST bacterial: ampicillin
35 VcCD00035370 Plasmid Details cDNA NA conserved hypothetical protein NA NP_230856 No/No FUSION pANT7_cGST bacterial: ampicillin
36 VcCD00035439 Plasmid Details cDNA NA c-di-GMP phosphodiesterase A-related protein NA NP_230302 No/No FUSION pANT7_cGST bacterial: ampicillin
37 VcCD00035502 Plasmid Details cDNA NA conserved hypothetical protein NA NP_232926 No/No FUSION pANT7_cGST bacterial: ampicillin
38 VcCD00036390 Plasmid Details cDNA NA conserved hypothetical protein NA NP_231232 No/No FUSION pANT7_cGST bacterial: ampicillin
39 VcCD00036466 Plasmid Details cDNA NA conserved hypothetical protein NA NP_231278 No/No FUSION pANT7_cGST bacterial: ampicillin
40 VcCD00036639 Plasmid Details cDNA NA conserved hypothetical protein NA NP_232502 No/Yes FUSION pANT7_cGST bacterial: ampicillin
41 VcCD00036641 Plasmid Details cDNA NA GGDEF family protein NA NP_232481 No/No FUSION pANT7_cGST bacterial: ampicillin
42 VcCD00061182 Plasmid Details cDNA vieA response regulator VieA NA NP_231289 No/No FUSION pDONR221 bacterial: kanamycin
43 VcCD00061275 Plasmid Details cDNA NA sensory box-GGDEF family protein NA NP_229731 No/No FUSION pDONR221 bacterial: kanamycin
44 VcCD00061277 Plasmid Details cDNA NA c-di-GMP phosphodiesterase A-related protein NA NP_230352 No/No FUSION pDONR221 bacterial: kanamycin
45 VcCD00061303 Plasmid Details cDNA NA sensory box-GGDEF family protein NA NP_229731 No/No FUSION pANT7_cGST bacterial: ampicillin
46 VcCD00061305 Plasmid Details cDNA NA c-di-GMP phosphodiesterase A-related protein NA NP_230352 No/No FUSION pANT7_cGST bacterial: ampicillin
47 VcCD00061332 Plasmid Details cDNA vieA response regulator VieA NA NP_231289 No/No FUSION pANT7_cGST bacterial: ampicillin
48 BaCD00065800 Plasmid Details cDNA NA sensory box/GGDEF family protein NA NP_843159 No/No FUSION pDONR221 bacterial: kanamycin
49 BaCD00068152 Plasmid Details cDNA NA sensory box/GGDEF family protein NA NP_844901 No/No FUSION pDONR221 bacterial: kanamycin
50 BaCD00068793 Plasmid Details cDNA NA EAL-domain protein NA NP_846439 No/No FUSION pDONR221 bacterial: kanamycin
51 BaCD00070787 Plasmid Details cDNA NA sensory box/GGDEF family protein NA NP_843159 No/No FUSION pANT7_cGST bacterial: ampicillin
52 BaCD00072809 Plasmid Details cDNA NA sensory box/GGDEF family protein NA NP_844901 No/No FUSION pANT7_cGST bacterial: ampicillin
53 BaCD00073450 Plasmid Details cDNA NA EAL-domain protein NA NP_846439 No/No FUSION pANT7_cGST bacterial: ampicillin
54 BsCD00086153 Plasmid Details cDNA NA NA NA NP_391052 No/No CLOSED pSpeedET bacterial: kanamycin
55 PaCD00087076 Plasmid Details cDNA NA NA NA NP_252636 No/No CLOSED pSpeedET bacterial: kanamycin
56 CaCD00282505 Plasmid Details cDNA NA NA NA AAK78303 No/No CLOSED pMH4 bacterial: ampicillin
57 SsCD00283456 Plasmid Details cDNA NA NA NA No/No CLOSED pSpeedET bacterial: kanamycin
58 BaCD00286413 Plasmid Details cDNA NA sensory box/GGDEF family protein NA NP_843083 No/No FUSION pDONR221 bacterial: kanamycin
59 BaCD00286429 Plasmid Details cDNA NA sensory box/GGDEF family protein NA NP_846127 No/No FUSION pDONR221 bacterial: kanamycin
60 BaCD00286740 Plasmid Details cDNA NA sensory box/GGDEF family protein NA NP_847749 No/No FUSION pDONR221 bacterial: kanamycin
61 CvCD00297871 Plasmid Details cDNA NA NA NA NP_900678.1 No/Yes CLOSED pSGX3 bacterial: kanamycin
62 CvCD00297874 Plasmid Details cDNA NA NA NA NP_901885.1 No/No CLOSED pSGX3 bacterial: kanamycin
63 MbCD00322801 Plasmid Details cDNA Maqu_3844 NA SP or TM removed No/No FUSION pSpeedET bacterial: kanamycin
64 IlCD00324471 Plasmid Details cDNA IL0147 NA NA No/No FUSION pSpeedET bacterial: kanamycin
65 DcCD00325465 Plasmid Details cDNA ECA2497 NA NA No/No FUSION pSpeedET bacterial: kanamycin
66 DdCD00325475 Plasmid Details cDNA Dde_2343 NA NA No/No FUSION pSpeedET bacterial: kanamycin
67 SdCD00326298 Plasmid Details cDNA Sden_0339 NA NA No/No FUSION pSpeedET bacterial: kanamycin
68 LaCD00326947 Plasmid Details cDNA LBA1414 NA NA No/No FUSION pSpeedET bacterial: kanamycin
69 MfCD00326979 Plasmid Details cDNA Mfla_1965 NA NA No/No FUSION pSpeedET bacterial: kanamycin
70 VfCD00328361 Plasmid Details cDNA VF_A0244 NA partial cds No/No FUSION pMCSG19 bacterial: ampicillin
71 VfCD00328365 Plasmid Details cDNA VF_1603 NA partial cds No/No FUSION pMCSG19 bacterial: ampicillin
72 WsCD00328367 Plasmid Details cDNA DGC2 NA partial cds No/No FUSION pMCSG19 bacterial: ampicillin
73 WsCD00328368 Plasmid Details cDNA DGC2 NA partial cds No/No FUSION pMCSG19 bacterial: ampicillin
74 WsCD00328370 Plasmid Details cDNA NIFL NA partial cds No/No FUSION pMCSG19 bacterial: ampicillin
75 WsCD00328371 Plasmid Details cDNA WS2174 NA full length No/No FUSION pMCSG19 bacterial: ampicillin
76 WsCD00328372 Plasmid Details cDNA NIFL NA partial cds No/No FUSION pMCSG19 bacterial: ampicillin
77 WsCD00328373 Plasmid Details cDNA WS2174 NA partial cds No/No FUSION pMCSG19 bacterial: ampicillin
78 PaCD00328437 Plasmid Details cDNA PA1433 PseudoCap:PA1433 partial cds No/No FUSION pMCSG19 bacterial: ampicillin
79 KpCD00328510 Plasmid Details cDNA KPN_00782 NA partial cds No/No FUSION pMCSG19 bacterial: ampicillin
80 KpCD00328526 Plasmid Details cDNA KPN_03274 NA full length No/No FUSION pMCSG19 bacterial: ampicillin
81 OoCD00328556 Plasmid Details cDNA Npun_R1060 NA partial cds No/No FUSION pMCSG19 bacterial: ampicillin
82 PpCD00328587 Plasmid Details cDNA PEPE_1789 NA partial cds No/No FUSION pMCSG19 bacterial: ampicillin
83 PpCD00328588 Plasmid Details cDNA PEPE_1642 NA partial cds No/No FUSION pMCSG19 bacterial: ampicillin
84 PpCD00328589 Plasmid Details cDNA PEPE_1642 NA partial cds No/No FUSION pMCSG19 bacterial: ampicillin
85 CpCD00328627 Plasmid Details cDNA CPS_2662 NA partial cds No/No FUSION pMCSG19 bacterial: ampicillin
86 CpCD00328630 Plasmid Details cDNA CPS_2662 NA partial cds No/No FUSION pMCSG19 bacterial: ampicillin
87 CpCD00328631 Plasmid Details cDNA CPS_2600 NA partial cds No/No FUSION pMCSG19 bacterial: ampicillin
88 CpCD00328632 Plasmid Details cDNA CPS_2600 NA partial cds No/No FUSION pMCSG19 bacterial: ampicillin
89 EcCD00328649 Plasmid Details cDNA yegE NA partial cds No/No FUSION pMCSG19 bacterial: ampicillin
90 EcCD00328650 Plasmid Details cDNA yegE NA partial cds No/No FUSION pMCSG19 bacterial: ampicillin
91 EcCD00328661 Plasmid Details cDNA ycgF NA partial cds No/No FUSION pMCSG19 bacterial: ampicillin
92 EcCD00328662 Plasmid Details cDNA ycgF NA partial cds No/No FUSION pMCSG19 bacterial: ampicillin
93 GsCD00328671 Plasmid Details cDNA GSU1149 NA partial cds No/No FUSION pMCSG19 bacterial: ampicillin
94 NmCD00332984 Plasmid Details cDNA Nmul_A1332 diguanylate phosphodiesterase full-length cds No/No CLOSED pSpeedET bacterial: kanamycin
95 VcCD00336541 Plasmid Details cDNA O68318 NA full-length cds AF031552 No/Yes CLOSED pSGX3 bacterial: kanamycin
96 CvCD00336661 Plasmid Details cDNA CV_0310 hypothetical protein full-length cds NC_005085.1 No/No CLOSED pSGX3 bacterial: kanamycin
97 SeCD00339155 Plasmid Details cDNA syc1323_c hypothetical protein targeted domain No/No FUSION pET21_NESG bacterial: ampicillin
98 NaCD00342216 Plasmid Details cDNA Saro_1403 diguanylate cyclase/phosphodiesterase NA No/No CLOSED pSGX3 bacterial: kanamycin
99 NaCD00342222 Plasmid Details cDNA Saro_1403 diguanylate cyclase/phosphodiesterase NA No/No CLOSED pSGX3 bacterial: kanamycin
100 WsCD00343376 Plasmid Details cDNA WS0806 hypothetical protein partial cds No/No CLOSED pMCSG19 bacterial: ampicillin
101 VpCD00371288 Plasmid Details cDNA VPA0609 hypothetical protein NA No/Yes CLOSED pSGX3 bacterial: kanamycin
102 MbCD00385539 Plasmid Details cDNA NA NA targeted domain No/Yes FUSION pET21_NESG bacterial: ampicillin
103 McCD00385579 Plasmid Details cDNA MCA0337 EAL/GGDEF domain-containing protein full length protein truncation No/Yes FUSION pET21_NESG bacterial: ampicillin
104 McCD00385582 Plasmid Details cDNA MCA0337 EAL/GGDEF domain-containing protein full length protein truncation No/Yes FUSION pET21_NESG bacterial: ampicillin
105 VfCD00422783 Plasmid Details cDNA VF_0087 sensory transduction protein kinase partial cds No/Yes CLOSED pMCSG19 bacterial: ampicillin
106 VfCD00422785 Plasmid Details cDNA VF_A0879 EAL domain-containing protein partial cds No/No CLOSED pMCSG19 bacterial: ampicillin
107 VfCD00422786 Plasmid Details cDNA VF_A0879 EAL domain-containing protein partial cds No/No CLOSED pMCSG19 bacterial: ampicillin
108 VfCD00422789 Plasmid Details cDNA VF_1603 GGDEF domain-containing protein full length No/No FUSION pMCSG19 bacterial: ampicillin
109 YeCD00422795 Plasmid Details cDNA YE4063 EAL domain-containing protein partial cds No/Yes CLOSED pMCSG19B bacterial: ampicillin
110 MbCD00423470 Plasmid Details cDNA NA NA targeted domain No/Yes FUSION pET21_NESG bacterial: ampicillin
111 XfCD00424261 Plasmid Details cDNA PD1671 two-component, response regulator NA No/No CLOSED pSGX3 bacterial: kanamycin
112 NaCD00424488 Plasmid Details cDNA Saro_1983 diguanylate cyclase/phosphodiesterase NA No/No CLOSED pSGX3 bacterial: kanamycin
113 XcCD00430034 Plasmid Details cDNA XCC1777 hypothetical protein NA No/No CLOSED pSGX3 bacterial: kanamycin
114 VfCD00432804 Plasmid Details cDNA VF_A0551 EAL domain-containing protein full length No/No CLOSED pMCSG19 bacterial: ampicillin
115 VfCD00432805 Plasmid Details cDNA VF_0087 sensory transduction protein kinase partial cds No/Yes CLOSED pMCSG19 bacterial: ampicillin
116 WsCD00432806 Plasmid Details cDNA DGC2 diguanylate cyclase partial cds No/No CLOSED pMCSG19 bacterial: ampicillin
117 WsCD00432807 Plasmid Details cDNA WS0806 hypothetical protein partial cds No/No CLOSED pMCSG19 bacterial: ampicillin
118 WsCD00432808 Plasmid Details cDNA WS0806 hypothetical protein partial cds No/No CLOSED pMCSG19 bacterial: ampicillin
119 WsCD00432810 Plasmid Details cDNA WS0108 GGDEF family protein partial cds No/No CLOSED pMCSG19 bacterial: ampicillin
120 EcCD00432842 Plasmid Details cDNA ycgF FAD-binding phosphodiesterase partial cds No/No CLOSED pMCSG19B bacterial: ampicillin
121 VfCD00449683 Plasmid Details cDNA VF_A0706 EAL domain-containing protein partial cds No/Yes CLOSED pMCSG19 bacterial: ampicillin
122 PaCD00449699 Plasmid Details cDNA PA1433 hypothetical protein partial cds No/No CLOSED pMCSG19 bacterial: ampicillin
123 PfCD00449711 Plasmid Details cDNA PFL_0131 GGDEF domain-containing protein partial cds No/No CLOSED pMCSG19 bacterial: ampicillin
124 PfCD00449712 Plasmid Details cDNA PFL_0131 GGDEF domain-containing protein partial cds No/No CLOSED pMCSG19 bacterial: ampicillin
125 PfCD00449713 Plasmid Details cDNA PFL_0131 GGDEF domain-containing protein partial cds No/No CLOSED pMCSG19 bacterial: ampicillin
126 PdCD00449715 Plasmid Details cDNA PP_1718 diguanylate phosphodiesterase partial cds No/No CLOSED pMCSG19 bacterial: ampicillin
127 CvCD00449745 Plasmid Details cDNA czcR two-component response regulator full length No/No CLOSED pMCSG19 bacterial: ampicillin
128 KpCD00449746 Plasmid Details cDNA KPN_00782 hypothetical protein full length No/No CLOSED pMCSG19 bacterial: ampicillin
129 KpCD00449747 Plasmid Details cDNA KPN_00782 hypothetical protein partial cds No/No CLOSED pMCSG19 bacterial: ampicillin
130 EcCD00449796 Plasmid Details cDNA ycgF hypothetical protein full length No/No CLOSED pMCSG19 bacterial: ampicillin
131 WsCD00452584 Plasmid Details cDNA NIFL nitrogen fixation positive protein partial cds No/No FUSION pMCSG19 bacterial: ampicillin
132 EcCD00530537 Plasmid Details cDNA gmr cyclic-di-GMP phosphodiesterase; csgD regulator; modulator of Rnase II stability full-length cds No/Yes CLOSED pMH4 bacterial: ampicillin
133 McCD00531303 Plasmid Details cDNA MCA0461 CBS/GGDEF/EAL domain-containing protein full length protein truncation No/Yes FUSION pET21_NESG bacterial: ampicillin
134 McCD00531304 Plasmid Details cDNA MCA0461 CBS/GGDEF/EAL domain-containing protein full length protein truncation No/Yes FUSION pET21_NESG bacterial: ampicillin
135 PaCD00531307 Plasmid Details cDNA PA2567 hypothetical protein full length protein truncation No/Yes FUSION pET21_NESG bacterial: ampicillin
136 PdCD00534182 Plasmid Details cDNA PP_5263 diguanylate cyclase full-length cds AAN70828.1 No/No CLOSED pSGX3 bacterial: kanamycin
137 PsCD00536999 Plasmid Details cDNA PSPPH_4247 GAF domain/GGDEF domain/EAL domain-containing protein NA No/No CLOSED pSGX3 bacterial: kanamycin
138 XcCD00537125 Plasmid Details cDNA XCC1777 hypothetical protein NA No/No CLOSED pSGX3 bacterial: kanamycin
139 AtCD00589338 Plasmid Details cDNA Atu0826 hypothetical protein NA No/Yes FUSION pET21_NESG bacterial: ampicillin
140 RdCD00591526 Plasmid Details cDNA RD1_1456 EAL domain-containing protein NA No/No FUSION pET21_NESG bacterial: ampicillin

 

      Explanation of Terms